prot_S-dermatodea_contig7974.16164.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig7974.16164.1
Unique Nameprot_S-dermatodea_contig7974.16164.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length322
Homology
BLAST of mRNA_S-dermatodea_contig7974.16164.1 vs. uniprot
Match: D7FUQ1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUQ1_ECTSI)

HSP 1 Score: 375 bits (964), Expect = 1.770e-127
Identity = 248/301 (82.39%), Postives = 260/301 (86.38%), Query Frame = 0
Query:    1 VTVPPKGEIFHAPTEDTERAVVTMKNNGVIPSDVSVRMWLEVVEETCRRDEARVQQAIAVEWGKRQSGQQQHXXXXXXXXXXNAPPAVSSNGAEPQVEQEEKDDATSNGEPRASAPAAXXXXXXXXXXXXDMTLAQQHREQRRQLQQLLGEELQLKLSMAATEGGAGHAQAEEAAAGGASGAAGESXXXXXXXXXXXXAAAAXXXXXXXXQAEPTDQEGVRPGPEEALWKMRRP-PVAPQPKSEGARVGSVKPRPRRGRAAGSMEERLPRRPAVRSVLYLRAFEDIVIPGFLHPFVWRKRG 300
            VTV PKGE+FHAPTEDTERA+VTMKNNGVIPSDVSVRMWLEVVEETCRRDEARVQQAIAVEWGKRQSGQ+QH          NAPPAVSS+GAEPQVEQEEKDDA S+GEPRASAPAAXXXXXXXXXXXXDM LAQQHREQRRQLQQ LGEELQ+K+S AATEGGAGHAQAEEAAAGGASGAAGES XXXXXXXXXXX    XXXXXXX +        V PGPEEALWK+RR  PVA QPK EGARVGSVKPRPRRGRAAGS+EERLPRRPA RSV+YLR F+D    GFLHPFV RKRG
Sbjct:    2 VTVSPKGEVFHAPTEDTERALVTMKNNGVIPSDVSVRMWLEVVEETCRRDEARVQQAIAVEWGKRQSGQEQHQPPQEQVAAGNAPPAVSSSGAEPQVEQEEKDDAASDGEPRASAPAAXXXXXXXXXXXXDMALAQQHREQRRQLQQQLGEELQVKVSHAATEGGAGHAQAEEAAAGGASGAAGESDXXXXXXXXXXXXXXXXXXXXXXDE--------VWPGPEEALWKLRRRLPVAAQPKLEGARVGSVKPRPRRGRAAGSIEERLPRRPAARSVVYLRTFKDTAKRGFLHPFVRRKRG 294          
BLAST of mRNA_S-dermatodea_contig7974.16164.1 vs. uniprot
Match: D7FMZ2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMZ2_ECTSI)

HSP 1 Score: 108 bits (269), Expect = 3.110e-25
Identity = 64/111 (57.66%), Postives = 76/111 (68.47%), Query Frame = 0
Query:  217 QEGVRPGPEEALWKMRR-PPVAPQPKSEGARVGSVKPRPRRGRAAGSMEERLPRRPAVRSVLYLRAFEDIVIPGFLHPFVWRKRGVRR----PRSPREQGREWHQTLVATA 322
            ++ V PGPEE LWK+RR PPVAP+ + EGAR+GS+KPRPRRG  AG MEERL RRP  RSV+Y RAFE +        F+ R  G R     P + REQGR+WH T VATA
Sbjct:   21 EKWVGPGPEEPLWKLRRTPPVAPRRELEGARLGSIKPRPRRGPVAGRMEERLSRRPVTRSVVYRRAFEGLA-------FITRSCGGRGLFGVPATLREQGRQWHATSVATA 124          
BLAST of mRNA_S-dermatodea_contig7974.16164.1 vs. uniprot
Match: A0A6H5KEJ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEJ2_9PHAE)

HSP 1 Score: 112 bits (279), Expect = 1.980e-24
Identity = 60/65 (92.31%), Postives = 61/65 (93.85%), Query Frame = 0
Query:  220 VRPGPEEALWKMRR-PPVAPQPKSEGARVGSVKPRPRRGRAAGSMEERLPRRPAVRSVLYLRAFE 283
            V PGPEEALWK+RR PPVAPQPKSEGARVGSVKPRPRRGRAAGSMEERLPRRPAVRSVLY R FE
Sbjct:  266 VGPGPEEALWKLRRRPPVAPQPKSEGARVGSVKPRPRRGRAAGSMEERLPRRPAVRSVLYGRTFE 330          
BLAST of mRNA_S-dermatodea_contig7974.16164.1 vs. uniprot
Match: A0A6H5L0N7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0N7_9PHAE)

HSP 1 Score: 97.4 bits (241), Expect = 4.570e-21
Identity = 60/84 (71.43%), Postives = 65/84 (77.38%), Query Frame = 0
Query:  243 EGARVGSVKPRPRRGRAAGSMEERLPRRPAVRSVLYLRAFEDIVIPGFLHPFVWRKRG----VRRPRSPREQGREWHQTLVATA 322
            E ARVGSVKPRPRRG AAGSMEERLPRRP VRS+L+LRA ED+ +PG    F  R  G    VRR RSPREQGRE H+TLVATA
Sbjct:   51 EAARVGSVKPRPRRGGAAGSMEERLPRRPVVRSMLHLRASEDM-LPG--RAFFARSCGGRGVVRRTRSPREQGREGHETLVATA 131          
BLAST of mRNA_S-dermatodea_contig7974.16164.1 vs. uniprot
Match: A0A6H5JF72_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF72_9PHAE)

HSP 1 Score: 75.1 bits (183), Expect = 2.790e-11
Identity = 39/50 (78.00%), Postives = 43/50 (86.00%), Query Frame = 0
Query:  234 PPVAPQPKSEGARVGSVKPRPRRGRAAGSMEERLPRRPAVRSVLYLRAFE 283
            PP+ P+PKS+GARV SVKPRPRRGRA G  EERLPRRPA RSV+Y RAFE
Sbjct:    3 PPMEPRPKSKGARVESVKPRPRRGRAEGCTEERLPRRPAARSVVYQRAFE 52          
BLAST of mRNA_S-dermatodea_contig7974.16164.1 vs. uniprot
Match: A0A6H5JP41_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP41_9PHAE)

HSP 1 Score: 68.2 bits (165), Expect = 1.100e-10
Identity = 36/50 (72.00%), Postives = 39/50 (78.00%), Query Frame = 0
Query:  234 PPVAPQPKSEGARVGSVKPRPRRGRAAGSMEERLPRRPAVRSVLYLRAFE 283
            PPV P+P  E  R   V P+PRRGRAAGSMEER PRRP VRSVLY+RAFE
Sbjct:    3 PPVEPRPPPERTRAEPVMPKPRRGRAAGSMEERHPRRPVVRSVLYMRAFE 52          
BLAST of mRNA_S-dermatodea_contig7974.16164.1 vs. uniprot
Match: A0A6H5JP68_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP68_9PHAE)

HSP 1 Score: 63.9 bits (154), Expect = 7.740e-8
Identity = 39/65 (60.00%), Postives = 40/65 (61.54%), Query Frame = 0
Query:  238 PQPKSEGARVGSVKPRPRRGRAAGSMEERLP-------------------RRPAVRSVLYLRAFE 283
            PQPKSEGARVGSVKP PR GRA GSMEERLP                   RRPA R V+Y RAFE
Sbjct:  211 PQPKSEGARVGSVKPEPRMGRAVGSMEERLPLRPVAEEGAGGGLHGGGLLRRPAARIVIYRRAFE 275          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig7974.16164.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D7FUQ1_ECTSI1.770e-12782.39Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FMZ2_ECTSI3.110e-2557.66Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KEJ2_9PHAE1.980e-2492.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L0N7_9PHAE4.570e-2171.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JF72_9PHAE2.790e-1178.00Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JP41_9PHAE1.100e-1072.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JP68_9PHAE7.740e-860.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig7974contigS-dermatodea_contig7974:4813..6834 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig7974.16164.1mRNA_S-dermatodea_contig7974.16164.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig7974 4811..6834 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig7974.16164.1 ID=prot_S-dermatodea_contig7974.16164.1|Name=mRNA_S-dermatodea_contig7974.16164.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=322bp
VTVPPKGEIFHAPTEDTERAVVTMKNNGVIPSDVSVRMWLEVVEETCRRD
EARVQQAIAVEWGKRQSGQQQHQPPQEQVVAGNAPPAVSSNGAEPQVEQE
EKDDATSNGEPRASAPAAAAAAPAAPAAPADMTLAQQHREQRRQLQQLLG
EELQLKLSMAATEGGAGHAQAEEAAAGGASGAAGESEGGAGQAQAEEAAA
AAGESEGGHAQAEPTDQEGVRPGPEEALWKMRRPPVAPQPKSEGARVGSV
KPRPRRGRAAGSMEERLPRRPAVRSVLYLRAFEDIVIPGFLHPFVWRKRG
VRRPRSPREQGREWHQTLVATA
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