mRNA_S-dermatodea_contig12345.1475.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig12345.1475.1 vs. uniprot
Match: D7G818_ECTSI (Ubiquitin-protein ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G818_ECTSI) HSP 1 Score: 236 bits (603), Expect = 2.780e-68 Identity = 133/241 (55.19%), Postives = 150/241 (62.24%), Query Frame = 1
Query: 1 PGWEKLYTADGVPFWTNHNEQTTSWDPP---------ESTVGVVSEAQGLRQPSM--ESSTFESNDKPGVA--------AVMGVSVSPAEP-RQHLGADGRPLPEGWEMQTTDQGVVYYVDHINKRTSWDPPLMSNGGMSVLDTQLPDIRNSETHAPPMAPXXXXXXXXXXXXXXXXXXXXXXXXARAGAPLAPS-----LGADLLNRFFTSWTGDTQGKSPLEAARNVIVTYLTGPGLKV 648
PGWEKLYT +GVPFWTNHNE+TTSWDPP + V VVSE +G+RQ S+ ES FES D G A A GV V + ++LGADGRPLPEGWEMQTTDQG+ YYVDH+NKRTSWDPP+MS+GGMSV+ ++LPDI PP A L P +GADLLNRFF SW GD QGKSPLEAARNVIVTYLTGPGLKV
Sbjct: 784 PGWEKLYTEEGVPFWTNHNERTTSWDPPVPAPAPAATPTVVSVVSEVKGMRQESLGAESELFESVDGGGAAEATEAAEAAATGVPVEGTQQVSRNLGADGRPLPEGWEMQTTDQGIPYYVDHLNKRTSWDPPMMSSGGMSVIASELPDI-------PP-------------------------------AELVPDSADLYMGADLLNRFFGSWMGDAQGKSPLEAARNVIVTYLTGPGLKV 986
BLAST of mRNA_S-dermatodea_contig12345.1475.1 vs. uniprot
Match: A0A6H5JUP4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUP4_9PHAE) HSP 1 Score: 236 bits (602), Expect = 3.900e-68 Identity = 133/236 (56.36%), Postives = 149/236 (63.14%), Query Frame = 1
Query: 1 PGWEKLYTADGVPFWTNHNEQTTSWDPP-------ESTVGVVSEAQGLRQPSM--ESSTFESNDKPG-----VAAVMGVSVSPAEP-RQHLGADGRPLPEGWEMQTTDQGVVYYVDHINKRTSWDPPLMSNGGMSVLDTQLPDIRNSETHAPPMAPXXXXXXXXXXXXXXXXXXXXXXXXARAGAPLAPS-----LGADLLNRFFTSWTGDTQGKSPLEAARNVIVTYLTGPGLKV 648
PGWEKLYT GVPFWTNHNE+TTSWDPP + VGVVSEA+G+RQ S+ ES FES D G AA GV V + ++LGADGRPLPEGWEMQTTDQG+ YYVDH+NKRTSWDPP+MS+GGMSV+ ++ PDI PP A L P +GADLLNRFF SW GD QGKSPLEAARNVIV YLTGPGLKV
Sbjct: 744 PGWEKLYTEGGVPFWTNHNERTTSWDPPVPAPAATPTMVGVVSEAKGMRQESLGAESEVFESVDGDGDGGAVEAAATGVPVEGTQQVSRNLGADGRPLPEGWEMQTTDQGIPYYVDHMNKRTSWDPPMMSSGGMSVIASERPDI-------PP-------------------------------AELVPDSADLYMGADLLNRFFGSWMGDNQGKSPLEAARNVIVAYLTGPGLKV 941
BLAST of mRNA_S-dermatodea_contig12345.1475.1 vs. uniprot
Match: B3MDX2_DROAN (Uncharacterized protein n=6 Tax=ananassae subgroup TaxID=32347 RepID=B3MDX2_DROAN) HSP 1 Score: 75.1 bits (183), Expect = 3.180e-12 Identity = 41/123 (33.33%), Postives = 63/123 (51.22%), Query Frame = 1
Query: 1 PGWEKLYTADGVPFWTNHNEQTTSWDPPESTVGVVSEAQGLRQPSMESSTFESNDKPGVAAVMGVSVSPAEPRQHLGADGRPLPEGWEMQTTDQGVVYYVDHINKRTSWDPPLMSNGGMSVLD 369
PGWE+ T DG ++ NH +TT W+ P Q +Q ++ + + ND S +LG PLP+GWE T+ G +Y+++HI++ TSW+ P M +G +SVLD
Sbjct: 268 PGWEQAKTNDGQIYYLNHTTKTTQWEDPR--------IQFRQQQNLMAERIKQNDVLQTTKQTTTSAI----ANNLG----PLPDGWEQAVTETGDIYFINHIDRTTSWNDPRMQSG-LSVLD 373
BLAST of mRNA_S-dermatodea_contig12345.1475.1 vs. uniprot
Match: H2LLU5_ORYLA (Transcriptional coactivator YAP1 n=7 Tax=Oryzias TaxID=8089 RepID=H2LLU5_ORYLA) HSP 1 Score: 74.3 bits (181), Expect = 5.140e-12 Identity = 47/142 (33.10%), Postives = 68/142 (47.89%), Query Frame = 1
Query: 1 PGWEKLYTADGVPFWTNHNEQTTSWDPPESTVGVVSEAQGLRQPSMESSTFESNDKPGVAAVMGVSVSPAEPRQHLGADGRPLPEGWEMQTTDQGVVYYVDHINKRTSW-DPPL---MSNGGMSVLDTQLPDIRNSETHAPP 414
PGWE T G ++ NH ++TT+W P +S+ Q + P + + SV+P + PLPEGWE T +G +YY+DHINK T+W DP L MS G +S+ + +R + APP
Sbjct: 115 PGWEMAKTPAGQRYFLNHLDKTTTWLDPR-----LSQLQSAQHPIANAPVHSHSFSNPAPTTQAQSVNP---------ESGPLPEGWEQAVTPEGEMYYIDHINKTTTWVDPRLAQKMSPGVLSLAMQRQEKLRCKQG-APP 241
BLAST of mRNA_S-dermatodea_contig12345.1475.1 vs. uniprot
Match: UPI001FB74F37 (transcriptional coactivator YAP1-like isoform X1 n=2 Tax=Mugil cephalus TaxID=48193 RepID=UPI001FB74F37) HSP 1 Score: 74.3 bits (181), Expect = 5.370e-12 Identity = 43/134 (32.09%), Postives = 59/134 (44.03%), Query Frame = 1
Query: 1 PGWEKLYTADGVPFWTNHNEQTTSWDPPESTVGVVSEAQGLRQPSMESSTFESNDKPGVAAVMGVSVSPAEPRQHLGADGRPLPEGWEMQTTDQGVVYYVDHINKRTSW-DPPLMSNGGMSVLDTQLPDIRNSE 399
PGWE T G ++ NH ++TT+W P L Q + P A + S +P Q++ + PLPEGWE T G VYY+DHINK T+W DP L +L + + E
Sbjct: 118 PGWEMAKTPTGQRYFLNHRDKTTTWHDPR-----------LSQLQSAVPQHPISGAPVHAHSLSNSAPTTQP-QNINPETGPLPEGWEQAVTADGEVYYIDHINKTTTWVDPRLAQKMNTGILGLAMQQRQEKE 239
BLAST of mRNA_S-dermatodea_contig12345.1475.1 vs. uniprot
Match: B4MQR3_DROWI (GK21386 n=2 Tax=Drosophila willistoni TaxID=7260 RepID=B4MQR3_DROWI) HSP 1 Score: 74.3 bits (181), Expect = 5.430e-12 Identity = 40/123 (32.52%), Postives = 63/123 (51.22%), Query Frame = 1
Query: 1 PGWEKLYTADGVPFWTNHNEQTTSWDPPESTVGVVSEAQGLRQPSMESSTFESNDKPGVAAVMGVSVSPAEPRQHLGADGRPLPEGWEMQTTDQGVVYYVDHINKRTSWDPPLMSNGGMSVLD 369
PGWE+ T DG ++ NH +TT W+ P + +Q + + ND V +P + +G PLP+GWE T+ G +Y+++HI++ TSW+ P M +G +SVLD
Sbjct: 249 PGWEQAKTNDGQIYYLNHTTKTTQWEDPRIQLRQ-------QQHRAMAERIKQND---------VLQTPKQTATTIG----PLPDGWEQAVTESGDIYFINHIDRTTSWNDPRMQSG-LSVLD 350
BLAST of mRNA_S-dermatodea_contig12345.1475.1 vs. uniprot
Match: A0A0X3NRX2_SCHSO (Uncharacterized protein (Fragment) n=1 Tax=Schistocephalus solidus TaxID=70667 RepID=A0A0X3NRX2_SCHSO) HSP 1 Score: 74.7 bits (182), Expect = 5.670e-12 Identity = 42/123 (34.15%), Postives = 60/123 (48.78%), Query Frame = 1
Query: 1 PGWEKLYTADGVPFWTNHNEQTTSWDPPESTVGVVSEAQGLRQPSMESSTFESNDKPGV-AAVMGVSVSPAEPRQHLGADGRPLPEGWEMQTTDQGVVYYVDHINKRTSW-DPPLMSNGGMSV 363
PGW+ TA+G PF+ NHN+QTT+WD P ++P ++S N P A SV ++H PLP GWE + G ++Y++H + T W DP L GG +V
Sbjct: 616 PGWQMALTANGRPFFINHNDQTTTWDDPR------------KRPRTKASRDRENSTPASETAASAPSVLAGAVQKHSIPALGPLPPGWEERVHTNGRIFYINHNARTTQWEDPRLERLGGPAV 726
BLAST of mRNA_S-dermatodea_contig12345.1475.1 vs. uniprot
Match: I4YJN4_WALMC (E3 ubiquitin-protein ligase n=2 Tax=Wallemia mellicola TaxID=1708541 RepID=I4YJN4_WALMC) HSP 1 Score: 74.7 bits (182), Expect = 5.710e-12 Identity = 42/129 (32.56%), Postives = 61/129 (47.29%), Query Frame = 1
Query: 4 GWEKLYTADGVPFWTNHNEQTTSWDPPESTVGVVSEAQGLRQPSMESSTFESNDKPGVAAVMGVSVSPAEPRQHLGADGRPLPEGWEMQTTDQGVVYYVDHINKRTSWDPPLMSNGGMSVLDTQLPDIR 390
GWE+ YTA+G P++ +HN +TT+W P RQ + V+G + + +QH + PLP GWEM+ T VY+VDH K T+WD P + S LD +P +
Sbjct: 308 GWEQRYTAEGRPYFVDHNTRTTTWVDPR------------RQQLLR--------------VLGPNGNNLSVQQHTVSQLGPLPSGWEMRLTSTARVYFVDHNTKTTTWDDPRLP----SSLDQNVPQYK 406
BLAST of mRNA_S-dermatodea_contig12345.1475.1 vs. uniprot
Match: UPI00147225FA (transcriptional coactivator YAP1-like isoform X1 n=2 Tax=Thalassophryne amazonica TaxID=390379 RepID=UPI00147225FA) HSP 1 Score: 73.9 bits (180), Expect = 7.320e-12 Identity = 43/134 (32.09%), Postives = 63/134 (47.01%), Query Frame = 1
Query: 4 GWEKLYTADGVPFWTNHNEQTTSW-DPPESTVGVVSEAQGLRQPSMESSTFESNDKPGVAAVMGVSVSPAEPRQHLGADGRPLPEGWEMQTTDQGVVYYVDHINKRTSW-DPPLMSNGGMSVLDTQLPDIRNSE 399
GWE TA G ++ NH ++TT+W DP S + + + + S T S +P +Q + + PLPEGWE T +G VYY+DHINK T+W DP L +++ L + E
Sbjct: 121 GWEMAKTATGQRYFLNHLDKTTTWHDPRLSQLQSAAAQHPISNTPVHSLT---------------STAPPAQQQSINPETGPLPEGWEQAVTAEGEVYYIDHINKTTTWVDPRLGQKINPAIIGMALQQRQEKE 239
BLAST of mRNA_S-dermatodea_contig12345.1475.1 vs. uniprot
Match: UPI001BD35130 (transcriptional coactivator YAP1-like isoform X1 n=2 Tax=Cheilinus undulatus TaxID=241271 RepID=UPI001BD35130) HSP 1 Score: 73.6 bits (179), Expect = 1.000e-11 Identity = 50/147 (34.01%), Postives = 68/147 (46.26%), Query Frame = 1
Query: 4 GWEKLYTADGVPFWTNHNEQTTSWDPPESTVGVVSEAQGLRQPSMESSTFESNDKPGVAAVMGVSVSPAEPRQHLGADGRPLPEGWEMQTTDQGVVYYVDHINKRTSW-DP---PLMSNG--GMSVLDTQLPD-IRNSETHAPPMAP 423
GWE T G ++ NH ++TT+W P + + A Q S S P +P Q + D PLPEGWE T G VYY+DHINK T+W DP P M+ G G+++ Q D +R + AP + P
Sbjct: 121 GWEMAKTPTGQRYFLNHVDKTTTWHDPR--LSQLQSAAAQHQISAAPVHAHSLSNP----------APTSQPQSISQDPGPLPEGWEQAVTADGEVYYIDHINKNTTWVDPRLAPKMNPGLLGLALQQRQEKDRLRCKQGLAPQITP 255 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig12345.1475.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig12345.1475.1 >prot_S-dermatodea_contig12345.1475.1 ID=prot_S-dermatodea_contig12345.1475.1|Name=mRNA_S-dermatodea_contig12345.1475.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=216bp PGWEKLYTADGVPFWTNHNEQTTSWDPPESTVGVVSEAQGLRQPSMESSTback to top mRNA from alignment at S-dermatodea_contig12345:3514..5658+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig12345.1475.1 ID=mRNA_S-dermatodea_contig12345.1475.1|Name=mRNA_S-dermatodea_contig12345.1475.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=2145bp|location=Sequence derived from alignment at S-dermatodea_contig12345:3514..5658+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig12345:3514..5658+ >mRNA_S-dermatodea_contig12345.1475.1 ID=mRNA_S-dermatodea_contig12345.1475.1|Name=mRNA_S-dermatodea_contig12345.1475.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1296bp|location=Sequence derived from alignment at S-dermatodea_contig12345:3514..5658+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |