prot_S-dermatodea_contig1234.1473.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig1234.1473.1
Unique Nameprot_S-dermatodea_contig1234.1473.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length149
Homology
BLAST of mRNA_S-dermatodea_contig1234.1473.1 vs. uniprot
Match: D8LC14_ECTSI (RF_PROK_I domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC14_ECTSI)

HSP 1 Score: 228 bits (580), Expect = 4.970e-73
Identity = 115/150 (76.67%), Postives = 130/150 (86.67%), Query Frame = 0
Query:    1 MHDSGPY--KPDRVGEIPEDQLQMSFTRSSGAGGQNVNKLSTKVELRFVVGEAEWLPHDVRLRLARHQSGRVNGRGELVITCQEFRTQKQNRSAALQKLRAMINEAWEPAKERKMRTGISRAGKEIRKADKRHRSQVKAGRSKLGSRDFD 148
            +HD  PY  +P   GE+PEDQLQ+SFTR+SGAGGQNVNK+STKVE+RFVV EAEWLP+DVRLRLAR + GR+N +GELV+T QEFRTQKQNRS AL KLR MINEAWEPAKERKMRTGIS+ GK IRK DK HRS+VKAGRSKL SRD+D
Sbjct:  101 LHDRRPYTPRPKSFGEVPEDQLQVSFTRASGAGGQNVNKVSTKVEMRFVVSEAEWLPYDVRLRLARQEKGRMNNKGELVVTAQEFRTQKQNRSQALAKLREMINEAWEPAKERKMRTGISKKGKAIRKQDKLHRSKVKAGRSKLSSRDYD 250          
BLAST of mRNA_S-dermatodea_contig1234.1473.1 vs. uniprot
Match: A0A1Z5KFY9_FISSO (Peptidyl-tRNA hydrolase ICT1 n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KFY9_FISSO)

HSP 1 Score: 135 bits (341), Expect = 3.830e-37
Identity = 72/129 (55.81%), Postives = 92/129 (71.32%), Query Frame = 0
Query:   14 EIPEDQLQMSFTRSSGAGGQNVNKLSTKVELRFVVGEAEWLPHDVRLRLARHQSGRVNGRGELVITCQEFRTQKQNRSAALQKLRAMINEAWEPAKERKMRTGISRAGKEIRKADKRHRSQVKAGRSKL 142
            +IPE+ L  SF RSSGAGGQNVNK++++V+LR  V EA W+P++VR RL + Q+ R++  G L I  QE RTQ  NR AA+QKLR M+ +AW   KER++R GIS   KE RK  KR RS VKAGR K+
Sbjct:   98 DIPEENLDFSFVRSSGAGGQNVNKVNSQVQLRLNVNEAYWIPYEVRQRLMQQQANRISKEGVLTIAAQEHRTQVANRKAAIQKLRDMLLQAWPRPKERRIRQGISIKTKEQRKEFKRRRSDVKAGRKKV 226          
BLAST of mRNA_S-dermatodea_contig1234.1473.1 vs. uniprot
Match: A0A7S2PK85_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PK85_9STRA)

HSP 1 Score: 134 bits (337), Expect = 3.090e-36
Identity = 65/128 (50.78%), Postives = 93/128 (72.66%), Query Frame = 0
Query:   15 IPEDQLQMSFTRSSGAGGQNVNKLSTKVELRFVVGEAEWLPHDVRLRLARHQSGRVNGRGELVITCQEFRTQKQNRSAALQKLRAMINEAWEPAKERKMRTGISRAGKEIRKADKRHRSQVKAGRSKL 142
            IPEDQ+Q+SF R+SGAGGQNVNK++TKVELRF +  A W+P +VR RL  +++GR+N  G   ITCQE RTQ QNR  A++KL+ ++  +W+  K RK+R G+++  KE R+ +K+  SQ K  R ++
Sbjct:  126 IPEDQIQLSFARASGAGGQNVNKVNTKVELRFHIDSANWIPREVRDRLKTNEAGRINNEGYFAITCQENRTQVQNRKEAIKKLQDILKSSWDRPKVRKLRKGLTKKAKENRRENKKKISQKKENRRRV 253          
BLAST of mRNA_S-dermatodea_contig1234.1473.1 vs. uniprot
Match: A0A1Z5KKA6_FISSO (Peptidyl-tRNA hydrolase ICT1 n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KKA6_FISSO)

HSP 1 Score: 131 bits (330), Expect = 1.690e-35
Identity = 70/129 (54.26%), Postives = 91/129 (70.54%), Query Frame = 0
Query:   14 EIPEDQLQMSFTRSSGAGGQNVNKLSTKVELRFVVGEAEWLPHDVRLRLARHQSGRVNGRGELVITCQEFRTQKQNRSAALQKLRAMINEAWEPAKERKMRTGISRAGKEIRKADKRHRSQVKAGRSKL 142
            +IPE+ L  SF RSSGAGGQNVNK++++V++R  V EA W+P++VR RL + Q+ R++  G L I  QE RTQ  NR AA+QKL+ M+ +AW   KER+MR GIS   KE RK  KR RS VK GR K+
Sbjct:   97 DIPEENLDFSFVRSSGAGGQNVNKVNSQVQVRLNVHEAYWIPYEVRQRLLQQQANRISKEGVLTIAAQEHRTQVANRKAAVQKLQNMLLQAWPRPKERRMRQGISIKTKEQRKEFKRRRSDVKEGRKKV 225          
BLAST of mRNA_S-dermatodea_contig1234.1473.1 vs. uniprot
Match: B8C3Q8_THAPS (RF_PROK_I domain-containing protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C3Q8_THAPS)

HSP 1 Score: 124 bits (311), Expect = 8.540e-34
Identity = 66/125 (52.80%), Postives = 85/125 (68.00%), Query Frame = 0
Query:   15 IPEDQLQMSFTRSSGAGGQNVNKLSTKVELRFVVGEAEWLPHDVRLRLARHQSGRVNGRGELVITCQEFRTQKQNRSAALQKLRAMINEAWEPAKERKMRTGISRAGKEIRKADKRHRSQVKAGR 139
            IPEDQ+Q SF RSSGAGGQNVNK+ TKVELRF +  A W+P +VR RL  +++ R+N  G + +  QE+RTQ QNR  AL+KL  ++  +W   K RKMR G+S   KE R+  K+  SQ KA R
Sbjct:    3 IPEDQIQTSFARSSGAGGQNVNKVETKVELRFHLDSASWIPAEVRERLKTNEANRINNDGFMSVNSQEYRTQVQNRKDALKKLEDILRNSWARPKVRKMRKGLSAKTKENRREMKKKISQKKANR 127          
BLAST of mRNA_S-dermatodea_contig1234.1473.1 vs. uniprot
Match: K0R9L2_THAOC (RF_PROK_I domain-containing protein n=2 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R9L2_THAOC)

HSP 1 Score: 122 bits (307), Expect = 9.780e-32
Identity = 65/140 (46.43%), Postives = 93/140 (66.43%), Query Frame = 0
Query:    3 DSGPYKPDRVGEIPEDQLQMSFTRSSGAGGQNVNKLSTKVELRFVVGEAEWLPHDVRLRLARHQSGRVNGRGELVITCQEFRTQKQNRSAALQKLRAMINEAWEPAKERKMRTGISRAGKEIRKADKRHRSQVKAGRSKL 142
            DSG +K      IPE++LQ++F R+SGAGGQNVNK++TKVE+RF +  AEW+P +VR RL  +++ R+N  G + IT QE RTQ QNR  A++KL+ ++  +W   K RK R G +R  KE R  +K+  S  K  R ++
Sbjct:  115 DSGEWKVPEHIAIPENELQITFARASGAGGQNVNKVNTKVEMRFHLPSAEWIPSEVRDRLQNNEANRINNEGYMSITSQEHRTQMQNRKDAMKKLQDIVRNSWARPKVRKTRKGPTRKAKEKRLENKKKNSLKKQSRGRV 254          
BLAST of mRNA_S-dermatodea_contig1234.1473.1 vs. uniprot
Match: A0A1E7F9H8_9STRA (Class I peptide chain release factor (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F9H8_9STRA)

HSP 1 Score: 118 bits (295), Expect = 2.200e-31
Identity = 66/128 (51.56%), Postives = 83/128 (64.84%), Query Frame = 0
Query:   15 IPEDQLQMSFTRSSGAGGQNVNKLSTKVELRFVVG---EAEWLPHDVRLRLARHQSGRVNGRGELVITCQEFRTQKQNRSAALQKLRAMINEAWEPAKERKMRTGISRAGKEIRKADKRHRSQVKAGR 139
            I E++L +SF RSSGAGGQNVNKLSTK E+R  V     + WLP +VR RL   QS R++  G L + CQE RTQ  N++ AL+KL+ MI EAW   K R  RTG+S+A K   K  K+ RS+ K  R
Sbjct:    3 IKEEELNISFVRSSGAGGQNVNKLSTKCEIRMDVNLKSSSSWLPDEVRRRLIEQQSNRISKEGILTLNCQENRTQGMNKATALKKLKDMIKEAWVRPKIRNQRTGVSKATKRRNKEFKKARSETKNNR 130          
BLAST of mRNA_S-dermatodea_contig1234.1473.1 vs. uniprot
Match: A0A8J5Y1J9_DIALT (RF_PROK_I domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5Y1J9_DIALT)

HSP 1 Score: 118 bits (296), Expect = 3.790e-31
Identity = 61/128 (47.66%), Postives = 89/128 (69.53%), Query Frame = 0
Query:   15 IPEDQLQMSFTRSSGAGGQNVNKLSTKVELRFVVGEAEWLPHDVRLRLARHQSGRVNGRGELVITCQEFRTQKQNRSAALQKLRAMINEAWEPAKERKMRTGISRAGKEIRKADKRHRSQVKAGRSKL 142
            +P+ ++Q++ +RSSG GGQNVNK++TKVELRF V  A+WLP DV+ RL    S R+N  GEL++T  E R+Q  N  +AL+K++ +++ A  P KER+MR G+S   K  R  DKR  ++VK  RS++
Sbjct:   33 VPKAKMQIAHSRSSGPGGQNVNKVNTKVELRFNVRAADWLPADVKARLIDDNSNRMNKEGELIVTASESRSQSANMDSALRKVQELVDVACIPPKEREMRVGLSAVTKRQRVEDKRRTAKVKQSRSRV 160          
BLAST of mRNA_S-dermatodea_contig1234.1473.1 vs. uniprot
Match: W7T6I3_9STRA (Peptidyl-trna hydrolase mitochondrial-like protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T6I3_9STRA)

HSP 1 Score: 119 bits (298), Expect = 7.720e-31
Identity = 65/133 (48.87%), Postives = 86/133 (64.66%), Query Frame = 0
Query:   14 EIPEDQLQMSFTRSSGAGGQNVNKLSTKVELRFVVGEAEWLPHDVRLRLARHQSGRVNGRGELVITCQEFRTQKQNRSAALQKLRAMINEAWEPAKERKMRTGISRAGKEIRKADKRHRSQVKAGRSKLGSRD 146
            EIP D+L  S++RSSG GGQNVNKL+T+VELRF V +A+W+P D+R R    Q  RVN  GE V++ QE RTQ +NR   ++KL   +  A    K R MRTG++   KE R  +K+ RS+ KA R + G  D
Sbjct:   81 EIPHDRLDFSYSRSSGPGGQNVNKLNTRVELRFHVEDADWIPEDMRHRFLEQQRHRVNKLGEFVLSSQEHRTQLKNREECVRKLEEALTRAAVVPKRRNMRTGLTEWEKENRLREKKKRSEKKASRRRNGKWD 213          
BLAST of mRNA_S-dermatodea_contig1234.1473.1 vs. uniprot
Match: A0A7S1D533_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D533_CYCTE)

HSP 1 Score: 120 bits (300), Expect = 1.370e-30
Identity = 64/129 (49.61%), Postives = 86/129 (66.67%), Query Frame = 0
Query:   14 EIPEDQLQMSFTRSSGAGGQNVNKLSTKVELRFVVGEAEWLPHDVRLRLARHQSGRVNGRGELVITCQEFRTQKQNRSAALQKLRAMINEAWEPAKERKMRTGISRAGKEIRKADKRHRSQVKAGRSKL 142
            EIPED++ +SF+RS G+GGQNVNK++TKVELRF + +A+WLP +VR R+      R+N  G   I   E RTQ+QNR AA  KL+ ++  A+   K RK+R GIS+  KE    DK+ R QVKA R  +
Sbjct:  133 EIPEDRVDISFSRSGGSGGQNVNKVNTKVELRFKLDDADWLPDEVRDRIREQAPNRINKDGVFNIQSSENRTQQQNRRAAFTKLQEIVLRAYPRPKVRKLRKGISKKAKERNLEDKKRRGQVKANRKSV 261          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1234.1473.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LC14_ECTSI4.970e-7376.67RF_PROK_I domain-containing protein n=1 Tax=Ectoca... [more]
A0A1Z5KFY9_FISSO3.830e-3755.81Peptidyl-tRNA hydrolase ICT1 n=1 Tax=Fistulifera s... [more]
A0A7S2PK85_9STRA3.090e-3650.78Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A1Z5KKA6_FISSO1.690e-3554.26Peptidyl-tRNA hydrolase ICT1 n=1 Tax=Fistulifera s... [more]
B8C3Q8_THAPS8.540e-3452.80RF_PROK_I domain-containing protein (Fragment) n=1... [more]
K0R9L2_THAOC9.780e-3246.43RF_PROK_I domain-containing protein n=2 Tax=Thalas... [more]
A0A1E7F9H8_9STRA2.200e-3151.56Class I peptide chain release factor (Fragment) n=... [more]
A0A8J5Y1J9_DIALT3.790e-3147.66RF_PROK_I domain-containing protein n=1 Tax=Diacro... [more]
W7T6I3_9STRA7.720e-3148.87Peptidyl-trna hydrolase mitochondrial-like protein... [more]
A0A7S1D533_CYCTE1.370e-3049.61Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.160.20coord: 10..145
e-value: 2.6E-42
score: 145.9
NoneNo IPR availablePANTHERPTHR11075:SF54PEPTIDYL-TRNA HYDROLASE ICT1, MITOCHONDRIALcoord: 12..141
NoneNo IPR availablePANTHERPTHR11075PEPTIDE CHAIN RELEASE FACTORcoord: 12..141
NoneNo IPR availableSUPERFAMILY110916Peptidyl-tRNA hydrolase domain-likecoord: 4..108
IPR000352Peptide chain release factor class IPFAMPF00472RF-1coord: 14..139
e-value: 1.8E-25
score: 89.1
IPR000352Peptide chain release factor class IPROSITEPS00745RF_PROK_Icoord: 26..42

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig1234contigS-dermatodea_contig1234:12209..16031 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig1234.1473.1mRNA_S-dermatodea_contig1234.1473.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig1234 10921..17237 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig1234.1473.1 ID=prot_S-dermatodea_contig1234.1473.1|Name=mRNA_S-dermatodea_contig1234.1473.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=149bp
MHDSGPYKPDRVGEIPEDQLQMSFTRSSGAGGQNVNKLSTKVELRFVVGE
AEWLPHDVRLRLARHQSGRVNGRGELVITCQEFRTQKQNRSAALQKLRAM
INEAWEPAKERKMRTGISRAGKEIRKADKRHRSQVKAGRSKLGSRDFD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000352Pep_chain_release_fac_I