mRNA_S-dermatodea_contig1234.1473.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig1234.1473.1
Unique NamemRNA_S-dermatodea_contig1234.1473.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
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BLAST of mRNA_S-dermatodea_contig1234.1473.1 vs. uniprot
Match: D8LC14_ECTSI (RF_PROK_I domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC14_ECTSI)

HSP 1 Score: 234 bits (596), Expect = 9.880e-70
Identity = 121/158 (76.58%), Postives = 136/158 (86.08%), Query Frame = 1 
Query:   13 GRGP-ARGMHDSGPY--KPDRVGEIPEDQLQMSFTRSSGAGGQNVNKLSTKVELRFVVGEAEWLPHDVRLRLARHQSGRVNGRGELVITCQEFRTQKQNRSAALQKLRAMINEAWEPAKERKMRTGISRAGKEIRKADKRHRSQVKAGRSKLGSRDFD 477
            GRG  ARG+HD  PY  +P   GE+PEDQLQ+SFTR+SGAGGQNVNK+STKVE+RFVV EAEWLP+DVRLRLAR + GR+N +GELV+T QEFRTQKQNRS AL KLR MINEAWEPAKERKMRTGIS+ GK IRK DK HRS+VKAGRSKL SRD+D
Sbjct:   93 GRGTIARGLHDRRPYTPRPKSFGEVPEDQLQVSFTRASGAGGQNVNKVSTKVEMRFVVSEAEWLPYDVRLRLARQEKGRMNNKGELVVTAQEFRTQKQNRSQALAKLREMINEAWEPAKERKMRTGISKKGKAIRKQDKLHRSKVKAGRSKLSSRDYD 250
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BLAST of mRNA_S-dermatodea_contig1234.1473.1 vs. uniprot
Match: A0A1Z5KFY9_FISSO (Peptidyl-tRNA hydrolase ICT1 n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KFY9_FISSO)

HSP 1 Score: 136 bits (342), Expect = 3.580e-33
Identity = 75/141 (53.19%), Postives = 97/141 (68.79%), Query Frame = 1 
Query:   37 HDSGPYKPDRVGEIPEDQLQMSFTRSSGAGGQNVNKLSTKVELRFVVGEAEWLPHDVRLRLARHQSGRVNGRGELVITCQEFRTQKQNRSAALQKLRAMINEAWEPAKERKMRTGISRAGKEIRKADKRHRSQVKAGRSKL 459
            HD+  +K     +IPE+ L  SF RSSGAGGQNVNK++++V+LR  V EA W+P++VR RL + Q+ R++  G L I  QE RTQ  NR AA+QKLR M+ +AW   KER++R GIS   KE RK  KR RS VKAGR K+
Sbjct:   88 HDN--WKVPEYIDIPEENLDFSFVRSSGAGGQNVNKVNSQVQLRLNVNEAYWIPYEVRQRLMQQQANRISKEGVLTIAAQEHRTQVANRKAAIQKLRDMLLQAWPRPKERRIRQGISIKTKEQRKEFKRRRSDVKAGRKKV 226
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BLAST of mRNA_S-dermatodea_contig1234.1473.1 vs. uniprot
Match: A0A7S2PK85_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PK85_9STRA)

HSP 1 Score: 134 bits (338), Expect = 2.640e-32
Identity = 67/134 (50.00%), Postives = 96/134 (71.64%), Query Frame = 1 
Query:   58 PDRVGEIPEDQLQMSFTRSSGAGGQNVNKLSTKVELRFVVGEAEWLPHDVRLRLARHQSGRVNGRGELVITCQEFRTQKQNRSAALQKLRAMINEAWEPAKERKMRTGISRAGKEIRKADKRHRSQVKAGRSKL 459
            PD +  IPEDQ+Q+SF R+SGAGGQNVNK++TKVELRF +  A W+P +VR RL  +++GR+N  G   ITCQE RTQ QNR  A++KL+ ++  +W+  K RK+R G+++  KE R+ +K+  SQ K  R ++
Sbjct:  121 PDHI-LIPEDQIQLSFARASGAGGQNVNKVNTKVELRFHIDSANWIPREVRDRLKTNEAGRINNEGYFAITCQENRTQVQNRKEAIKKLQDILKSSWDRPKVRKLRKGLTKKAKENRRENKKKISQKKENRRRV 253
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BLAST of mRNA_S-dermatodea_contig1234.1473.1 vs. uniprot
Match: A0A1Z5KKA6_FISSO (Peptidyl-tRNA hydrolase ICT1 n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KKA6_FISSO)

HSP 1 Score: 132 bits (331), Expect = 1.210e-31
Identity = 73/141 (51.77%), Postives = 96/141 (68.09%), Query Frame = 1 
Query:   37 HDSGPYKPDRVGEIPEDQLQMSFTRSSGAGGQNVNKLSTKVELRFVVGEAEWLPHDVRLRLARHQSGRVNGRGELVITCQEFRTQKQNRSAALQKLRAMINEAWEPAKERKMRTGISRAGKEIRKADKRHRSQVKAGRSKL 459
            HD+  +K     +IPE+ L  SF RSSGAGGQNVNK++++V++R  V EA W+P++VR RL + Q+ R++  G L I  QE RTQ  NR AA+QKL+ M+ +AW   KER+MR GIS   KE RK  KR RS VK GR K+
Sbjct:   87 HDN--WKVPEYIDIPEENLDFSFVRSSGAGGQNVNKVNSQVQVRLNVHEAYWIPYEVRQRLLQQQANRISKEGVLTIAAQEHRTQVANRKAAVQKLQNMLLQAWPRPKERRMRQGISIKTKEQRKEFKRRRSDVKEGRKKV 225
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BLAST of mRNA_S-dermatodea_contig1234.1473.1 vs. uniprot
Match: B8C3Q8_THAPS (RF_PROK_I domain-containing protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C3Q8_THAPS)

HSP 1 Score: 124 bits (311), Expect = 5.050e-30
Identity = 66/125 (52.80%), Postives = 85/125 (68.00%), Query Frame = 1 
Query:   76 IPEDQLQMSFTRSSGAGGQNVNKLSTKVELRFVVGEAEWLPHDVRLRLARHQSGRVNGRGELVITCQEFRTQKQNRSAALQKLRAMINEAWEPAKERKMRTGISRAGKEIRKADKRHRSQVKAGR 450
            IPEDQ+Q SF RSSGAGGQNVNK+ TKVELRF +  A W+P +VR RL  +++ R+N  G + +  QE+RTQ QNR  AL+KL  ++  +W   K RKMR G+S   KE R+  K+  SQ KA R
Sbjct:    3 IPEDQIQTSFARSSGAGGQNVNKVETKVELRFHLDSASWIPAEVRERLKTNEANRINNDGFMSVNSQEYRTQVQNRKDALKKLEDILRNSWARPKVRKMRKGLSAKTKENRREMKKKISQKKANR 127
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BLAST of mRNA_S-dermatodea_contig1234.1473.1 vs. uniprot
Match: K0R9L2_THAOC (RF_PROK_I domain-containing protein n=2 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R9L2_THAOC)

HSP 1 Score: 123 bits (308), Expect = 3.900e-28
Identity = 65/140 (46.43%), Postives = 93/140 (66.43%), Query Frame = 1 
Query:   40 DSGPYKPDRVGEIPEDQLQMSFTRSSGAGGQNVNKLSTKVELRFVVGEAEWLPHDVRLRLARHQSGRVNGRGELVITCQEFRTQKQNRSAALQKLRAMINEAWEPAKERKMRTGISRAGKEIRKADKRHRSQVKAGRSKL 459
            DSG +K      IPE++LQ++F R+SGAGGQNVNK++TKVE+RF +  AEW+P +VR RL  +++ R+N  G + IT QE RTQ QNR  A++KL+ ++  +W   K RK R G +R  KE R  +K+  S  K  R ++
Sbjct:  115 DSGEWKVPEHIAIPENELQITFARASGAGGQNVNKVNTKVEMRFHLPSAEWIPSEVRDRLQNNEANRINNEGYMSITSQEHRTQMQNRKDAMKKLQDIVRNSWARPKVRKTRKGPTRKAKEKRLENKKKNSLKKQSRGRV 254
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BLAST of mRNA_S-dermatodea_contig1234.1473.1 vs. uniprot
Match: A0A1E7F9H8_9STRA (Class I peptide chain release factor (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F9H8_9STRA)

HSP 1 Score: 118 bits (295), Expect = 8.300e-28
Identity = 66/128 (51.56%), Postives = 83/128 (64.84%), Query Frame = 1 
Query:   76 IPEDQLQMSFTRSSGAGGQNVNKLSTKVELRFVVG---EAEWLPHDVRLRLARHQSGRVNGRGELVITCQEFRTQKQNRSAALQKLRAMINEAWEPAKERKMRTGISRAGKEIRKADKRHRSQVKAGR 450
            I E++L +SF RSSGAGGQNVNKLSTK E+R  V     + WLP +VR RL   QS R++  G L + CQE RTQ  N++ AL+KL+ MI EAW   K R  RTG+S+A K   K  K+ RS+ K  R
Sbjct:    3 IKEEELNISFVRSSGAGGQNVNKLSTKCEIRMDVNLKSSSSWLPDEVRRRLIEQQSNRISKEGILTLNCQENRTQGMNKATALKKLKDMIKEAWVRPKIRNQRTGVSKATKRRNKEFKKARSETKNNR 130
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BLAST of mRNA_S-dermatodea_contig1234.1473.1 vs. uniprot
Match: A0A8J5Y1J9_DIALT (RF_PROK_I domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5Y1J9_DIALT)

HSP 1 Score: 118 bits (296), Expect = 1.480e-27
Identity = 61/128 (47.66%), Postives = 89/128 (69.53%), Query Frame = 1 
Query:   76 IPEDQLQMSFTRSSGAGGQNVNKLSTKVELRFVVGEAEWLPHDVRLRLARHQSGRVNGRGELVITCQEFRTQKQNRSAALQKLRAMINEAWEPAKERKMRTGISRAGKEIRKADKRHRSQVKAGRSKL 459
            +P+ ++Q++ +RSSG GGQNVNK++TKVELRF V  A+WLP DV+ RL    S R+N  GEL++T  E R+Q  N  +AL+K++ +++ A  P KER+MR G+S   K  R  DKR  ++VK  RS++
Sbjct:   33 VPKAKMQIAHSRSSGPGGQNVNKVNTKVELRFNVRAADWLPADVKARLIDDNSNRMNKEGELIVTASESRSQSANMDSALRKVQELVDVACIPPKEREMRVGLSAVTKRQRVEDKRRTAKVKQSRSRV 160
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BLAST of mRNA_S-dermatodea_contig1234.1473.1 vs. uniprot
Match: W7T6I3_9STRA (Peptidyl-trna hydrolase mitochondrial-like protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T6I3_9STRA)

HSP 1 Score: 119 bits (299), Expect = 2.360e-27
Identity = 65/133 (48.87%), Postives = 86/133 (64.66%), Query Frame = 1 
Query:   73 EIPEDQLQMSFTRSSGAGGQNVNKLSTKVELRFVVGEAEWLPHDVRLRLARHQSGRVNGRGELVITCQEFRTQKQNRSAALQKLRAMINEAWEPAKERKMRTGISRAGKEIRKADKRHRSQVKAGRSKLGSRD 471
            EIP D+L  S++RSSG GGQNVNKL+T+VELRF V +A+W+P D+R R    Q  RVN  GE V++ QE RTQ +NR   ++KL   +  A    K R MRTG++   KE R  +K+ RS+ KA R + G  D
Sbjct:   81 EIPHDRLDFSYSRSSGPGGQNVNKLNTRVELRFHVEDADWIPEDMRHRFLEQQRHRVNKLGEFVLSSQEHRTQLKNREECVRKLEEALTRAAVVPKRRNMRTGLTEWEKENRLREKKKRSEKKASRRRNGKWD 213
[Close]
BLAST of mRNA_S-dermatodea_contig1234.1473.1 vs. uniprot
Match: A0A8J9S3S9_PHATR (Hypothetical protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9S3S9_PHATR)

HSP 1 Score: 115 bits (289), Expect = 5.800e-27
Identity = 65/125 (52.00%), Postives = 81/125 (64.80%), Query Frame = 1 
Query:   76 IPEDQLQMSFTRSSGAGGQNVNKLSTKVELRFVVGEAEWLPHDVRLRLARHQSGRVNGRGELVITCQEFRTQKQNRSAALQKLRAMINEAWEPAKERKMRTGISRAGKEIRKADKRHRSQVKAGR 450
            +PE QL+ SF RS GAGGQNVNK++T V+++  +    W+P +VR RL + Q  RV+    LV+   E RTQ  NR  A+ KLR MI +AWE  KER +RTGIS   KE RK  KR RS VK GR
Sbjct:    3 VPESQLEFSFIRSGGAGGQNVNKVNTCVQIKLYLPGMTWVPTEVRQRLEQQQRHRVSKEQYLVMQVSEHRTQSANRKTAVDKLRNMIRQAWERPKERSIRTGISVKTKEQRKDFKRKRSLVKQGR 127
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1234.1473.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LC14_ECTSI9.880e-7076.58RF_PROK_I domain-containing protein n=1 Tax=Ectoca... [more]
A0A1Z5KFY9_FISSO3.580e-3353.19Peptidyl-tRNA hydrolase ICT1 n=1 Tax=Fistulifera s... [more]
A0A7S2PK85_9STRA2.640e-3250.00Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A1Z5KKA6_FISSO1.210e-3151.77Peptidyl-tRNA hydrolase ICT1 n=1 Tax=Fistulifera s... [more]
B8C3Q8_THAPS5.050e-3052.80RF_PROK_I domain-containing protein (Fragment) n=1... [more]
K0R9L2_THAOC3.900e-2846.43RF_PROK_I domain-containing protein n=2 Tax=Thalas... [more]
A0A1E7F9H8_9STRA8.300e-2851.56Class I peptide chain release factor (Fragment) n=... [more]
A0A8J5Y1J9_DIALT1.480e-2747.66RF_PROK_I domain-containing protein n=1 Tax=Diacro... [more]
W7T6I3_9STRA2.360e-2748.87Peptidyl-trna hydrolase mitochondrial-like protein... [more]
A0A8J9S3S9_PHATR5.800e-2752.00Hypothetical protein n=2 Tax=Phaeodactylum tricorn... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig1234contigS-dermatodea_contig1234:10921..17237 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score229.2
Seed ortholog evalue1.3e-57
Seed eggNOG ortholog2880.D8LC14
KEGG rclassRC01263
KEGG koko:K04121,ko:K15033
KEGG ReactionR05092
KEGG Pathwayko00904,ko01100,ko01110,map00904,map01100,map01110
GOsGO:0000313,GO:0000315,GO:0003674,GO:0003676,GO:0003723,GO:0003747,GO:0003824,GO:0004045,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0005761,GO:0005762,GO:0005840,GO:0006412,GO:0006414,GO:0006415,GO:0006417,GO:0006518,GO:0006807,GO:0008079,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010608,GO:0015934,GO:0016043,GO:0016150,GO:0016787,GO:0016788,GO:0019222,GO:0019538,GO:0022411,GO:0031323,GO:0031326,GO:0031974,GO:0032268,GO:0032543,GO:0032984,GO:0032991,GO:0034248,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0050789,GO:0050794,GO:0051171,GO:0051246,GO:0052689,GO:0060255,GO:0065007,GO:0070013,GO:0070126,GO:0071704,GO:0071840,GO:0072344,GO:0080090,GO:0097159,GO:0098798,GO:0140053,GO:0140098,GO:0140101,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904,GO:2000112
EggNOG free text desc.translation release factor activity, codon nonspecific
EggNOG OGsCOG1186@1,KOG3429@2759
EC3.1.1.29,4.2.3.19
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03012
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionPeptide chain release factor class I/class II
Ec32 orthologEc-20_004060.1
Exons5
Model size1686
Cds size447
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924244.3943796-UTR-S-dermatodea_contig1234:10920..109511622924244.3943796-UTR-S-dermatodea_contig1234:10920..10951Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig1234 10921..10951 +
1694079120.495512-UTR-S-dermatodea_contig1234:10920..109511694079120.495512-UTR-S-dermatodea_contig1234:10920..10951Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig1234 10921..10951 +
1622924244.404334-UTR-S-dermatodea_contig1234:12206..122081622924244.404334-UTR-S-dermatodea_contig1234:12206..12208Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig1234 12207..12208 +
1694079120.5106103-UTR-S-dermatodea_contig1234:12206..122081694079120.5106103-UTR-S-dermatodea_contig1234:12206..12208Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig1234 12207..12208 +
1622924244.4547296-UTR-S-dermatodea_contig1234:16031..172371622924244.4547296-UTR-S-dermatodea_contig1234:16031..17237Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig1234 16032..17237 +
1694079120.5743048-UTR-S-dermatodea_contig1234:16031..172371694079120.5743048-UTR-S-dermatodea_contig1234:16031..17237Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig1234 16032..17237 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924244.41551-CDS-S-dermatodea_contig1234:12208..122851622924244.41551-CDS-S-dermatodea_contig1234:12208..12285Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1234 12209..12285 +
1694079120.5256267-CDS-S-dermatodea_contig1234:12208..122851694079120.5256267-CDS-S-dermatodea_contig1234:12208..12285Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1234 12209..12285 +
1622924244.4237359-CDS-S-dermatodea_contig1234:13685..138591622924244.4237359-CDS-S-dermatodea_contig1234:13685..13859Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1234 13686..13859 +
1694079120.5359883-CDS-S-dermatodea_contig1234:13685..138591694079120.5359883-CDS-S-dermatodea_contig1234:13685..13859Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1234 13686..13859 +
1622924244.432457-CDS-S-dermatodea_contig1234:15284..154351622924244.432457-CDS-S-dermatodea_contig1234:15284..15435Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1234 15285..15435 +
1694079120.548175-CDS-S-dermatodea_contig1234:15284..154351694079120.548175-CDS-S-dermatodea_contig1234:15284..15435Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1234 15285..15435 +
1622924244.4430702-CDS-S-dermatodea_contig1234:15986..160311622924244.4430702-CDS-S-dermatodea_contig1234:15986..16031Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1234 15987..16031 +
1694079120.5590477-CDS-S-dermatodea_contig1234:15986..160311694079120.5590477-CDS-S-dermatodea_contig1234:15986..16031Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1234 15987..16031 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig1234.1473.1prot_S-dermatodea_contig1234.1473.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig1234 12209..16031 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig1234.1473.1

>prot_S-dermatodea_contig1234.1473.1 ID=prot_S-dermatodea_contig1234.1473.1|Name=mRNA_S-dermatodea_contig1234.1473.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=149bp
MHDSGPYKPDRVGEIPEDQLQMSFTRSSGAGGQNVNKLSTKVELRFVVGE
AEWLPHDVRLRLARHQSGRVNGRGELVITCQEFRTQKQNRSAALQKLRAM
INEAWEPAKERKMRTGISRAGKEIRKADKRHRSQVKAGRSKLGSRDFD*
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mRNA from alignment at S-dermatodea_contig1234:10921..17237+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig1234.1473.1 ID=mRNA_S-dermatodea_contig1234.1473.1|Name=mRNA_S-dermatodea_contig1234.1473.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=6317bp|location=Sequence derived from alignment at S-dermatodea_contig1234:10921..17237+ (Saccorhiza dermatodea SderLu1190fm monoicous)
GCTGCGGCGGCGGGCCGCGGCCCTGCTAGAGGTGAGGAGAGGAGGGGGCG
GGGGGGGGGCTTTTGCATCGCGCACGCCGCGAGAGGTGTCGGGGGTGCGT
ACGGTTCATGAGCTCGTGCGCTGCGAGAGACGGAGAGAAGCTGTGTGTAA
AGGGGTTGGTATTAGGTCGCCTGACTTGCGCCGGTGTTGCCTTGGGTTGC
AACTGAATGGAAGTGATCGCCTCGCCACTCTCGTGACGTGCATGCTCTCT
ATAGTACTTGTACTTGAAGTTGGTTTTCGTGTTTGGAGGGGTTGTTTGCT
TACGAGCGGACCTTCGCCCCTCTTCTGTGCGTGTGTCTTGGCCCATCCTG
TAATCATGATCACCATACCATACTTGTACAAGCACTGCTGACCAGGTCTA
TGCATATATGTAGTAGGCCTCGCTTGTCGTTGGAGATACATGGCCCGTGA
TTGCTGAGGGATTAGTCGCCGCCGAACACAGGCGTGATCGGATCACACTA
CAAACTCCACAACACTGCCTACACTGAAACACAAAATCGGACCAAAATAT
CACTGTTACTGTATACTTGTACAGGATGATTTAATCGCTACTACAAGACT
ACTCTGTGTATGTACATAGTACACCAGTATAATACTACTGTAATACTCGA
GTAGTATGATATACTACTGATACTGCCTGTAATATGCATTCATCGAAACA
AGTTCCTCCTCCTTGTTCAGCCATGGACATTTCGTGTTTCAGCAATCGAT
ACGGCAGTAATCGATCGCTTCTATCATACAAGTAATATTATAGAACACAC
ATACTTGTAGAGGCACACGTATTTTGATAATACGCAACCAGCAGTGCCAC
GGCGGCATCTGTGTACAAGTAGTTGTAGGGGTTCTGTTCTGCGAAAGCTG
AAAGCTGTCTGTTCAAAGGCAAGTAATATCCCGCGGCACACGCGCAGGTT
GCCACATAACAATCCGCAACATGCCTGCGAACAACAAACATTATCTACTA
TATCTATACATTGATTTCGAAAACTTTTAGAAAAGGGAAGATGGTCCAAG
CTCCACCTATGGAGGCTTACATTGCGTGTGATGCTATGGTTTCATGTCAT
GTATGATGTTACAGTATACTTGTAGGGATATGATTTCAAGTGTTTATGTC
CTGAGCGATGTCCTGGTGGTGCAGCTTTGACGTGCATTGTGTGCCGAGAA
GATTTGTCTCTACTGCATAACATACAAACATCCTCCCTCCCCCCTTTCGC
CCCTGTCTGGGCTTTTTGTGTGGCGTGGTGGCGCAGGGATGCACGACAGC
GGACCCTACAAGCCCGACCGTGTGGGGGAGATTCCCGAGGATCAGCTGCA
GATGTCCTTTACGCGGTGGGTTGCCAAACTCCCCCCGTGAACGTATTTAG
ACCCGGCTGTGTTTTCTGCAGCACAGCGCCTGTACTGGGTTCTTCGATCC
CGATTTGGAGGTTCCATTTGAAAGTTGCCGCTGATGGTGGCGTAGACACG
GCTGTTTCCTGCAGGTAGCAGCGAACACTCCTCAAAGCTAACCTATCTTT
CTTTGCGCGCTCGTATGAACGCCTGCGGGCTCGCGCGCGTTGCAGACGAT
GCCTAATTGTGGCGATGCGAACGGGCAATTGATGTTTCTTCGGCTGTTGA
ATCCTTTACCGCAACGCCGTTGTAAATTGATCTCTTTAATACGCGGTTGT
TGGCGGGTGGCTCTCGAGGCTCAAGACTTGGTTGATCGTGTCTTGATTTT
AATTTTTTGAGGTTCACACGGGTGAGGCCGTGCCAGTAGTCCAGCCCGGT
TCGTGGTGATATGAGGAAAACATGTATAAAAGTCACCATAGTCACACTCT
CAGATTATTTCCCATCTACACATCGTTACGGCAGTATACCAGAGAGAAAA
TTGTCACATTCCGACCCGCGGCCATTTCTCCCATGCACAACAAGGCTAAA
TTTTAGGGTTGGGTACTGGACCAGTACGTACTGGCAGTGTACTGGTGCTG
GCCAGCACATAAGTCCTGGCTGAGGGGGCTGCCAGTACCAGTACATGCAC
TTGTACTTACGTACGTCCTACATAACGCCTCATTGTTTAACGGAACCCAT
CGAATTGCGCCGCGCCGCGTTGATAGAGGGAGGGAGAGAGTACGCACGCA
CGCACACCTAGGAAACAATTATCAATGCATGTGTCGCCGCGATTCCGGAG
CTAATCGGCATCGCACTTTGTCTGGTGTGTGGCATATGGATTATTGTGAG
GCATATTCAATATTTGTTCCCGAGTTTATGCCTTTACACATGGTCGAAAA
TCACAAATTACATATCGTCTAGTGAAGCCAAACCGCGTATTAATGCGCCT
CCAGCCCTCCGGGGGCGCCTCCGGCGGGGCGCGGCTTCGCCCCGACCAGT
ACCCAACCCTACAAATAGGAAGTATGCACGTTATTTGATTTTTTCCAGAA
TCAGTGTTGTCAGTGCGACAGGTACCGTTACGCAGAACGCGACGGGATCG
ATGCGGCGGTCGTGGTGCCACCCTTGCAAACAACTGAGACAAAAAAAACT
GCGTTACTGAAAAACAGTATCGCACTAGAGGGCAAATCCTCCACCATACC
GATGAACCCGCAATTGCCCCGCGAGCGAGCTATCTAGACCTCTGTCGGCA
TCGCCTCATATCAGACCCTCAGTTTCGCTAACATTGCGCCTAGATTGACA
AAGCGCTCACTCTTCCTATAACGTCCTCACGGGATCTGCGACCGCTTCCC
TGCTGCGCGCCGCAGGTCCTCTGGCGCCGGAGGGCAAAACGTGAACAAGC
TCAGCACCAAGGTGGAGTTGCGCTTCGTTGTCGGAGAGGCCGAATGGCTG
CCGCACGACGTGCGCCTGCGGCTGGCGAGGCATCAGAGCGGTCGGGTAAA
CGGGCGAGGGGAGCTTGTCATCACGTGTCAGGAATTCAGGCGCGTGTGCT
TCGTCTGGATTGGTTTTCCGGTGGAGACAGGGAGAGAGGGGCGGGGGGCG
GGGGCACGCCGGGGGGGGTGTAGTTATGTTTAACGCATGTATCCAAACAG
ACATAGGCCACGCATCCCAATACAATGCCGGGACAGAGCGATATGCCGGT
TTTTTTCCGGTCAGGCTGCGTTTCGCAAGGATAATACCAGTTGCTAGCCA
CCATCCTTGCGTTTGCGACGCTCAACCGATTCGCCATGGGTTGATTGGAC
ACCCCGGGCAACCAAATGGTGCACATCAGTTAGGCGTCCATATACCCCAA
GTTTCGTCAAGGGACTTGTATCTCGGCGAAACGCACAAGCACCGCACGCA
CACAACACACACGACGGTACATGTGTGATACGCCCAAGACTATAATCTAC
TCATGAGTACACCTGGCGGAATACCACTCAAAAGTCAATGGTTGCTCTAG
CGCTTTCGAAGTATCAATTGTTCAACAGGCATCCTCTACTTGTAGGACAT
GACGTGCTTCCCCCCTTTGGAGAGATACAAGACTCTTGACCGAGGTCTCT
GAGCTCGCAGGACACATTGCATGAACTCCCCCATGCCCTGTATATAGCGG
GTTTTCAGAGGGGGGGGTGTACCCATTGATCGTGCATGCCGTAGTCGTTA
GACCATAGACCTCGCATCCCTACAAAGCCGNNNNNNNNNNTCCCTCCTGC
TGTCCTTGTCCTGCGTTTGTTTGTGTTGGGTGCGGGTCTGGCGCTCTTTC
GTGGGGGGTGTTGGGGTTACTATCCAATGTGCCGCCTCCATACATATTTT
AACACATACTTCCTCTTCAATCAGGCAGTATTCTACTTATATCTCATACT
CCATACTTGTATTATAGGGTGGCCTGGGCAGGCCCCTTTTCTCCATCCAA
CCAGAAGGATGGATCGCACAGATACCTCACTTAATATTTTGGGGACATTT
TTGCGTGTCTTTCCTATATACTTCAGTATGGTGTTACTATCATACTTGTA
TTATTCTCTCTTGTGCTATAGTAAGTACTGGGGACGGTATTGCTGTATTT
GCAGAAGTAAATTTATGGATTTGTTTTTGTACTCCTTGACTCTTTGCGCA
TCTGACCACAAGCCGGGTCGGACTTATCAGATCGGCTGTACGTGTGTGCT
ATTCCAACAAAACCAATGAAAAATCAAGTGGGGCACGCGGCACCTTGCCT
TTATTTTACCGCGACGTTCGACATTTCGGCTACCTCGAATTGTTTTCGCG
AAAAGATGGCACCCTGTTTTGTCTACGGTAGTATTCCAGATGATGCGCTT
GAGAGCTAAATTGCTCGTGATGTTGCCCGAACGCTCGCTAGTGTTCTCAC
ATTTTCTGCGCCGTTGCTTTTTGGTTGGCGCGTTATGTGTGTTTTCGGCG
ACGACGCGCTACAGAACGCAGAAGCAAAACCGGTCTGCGGCGCTGCAGAA
GCTGCGAGCGATGATCAACGAAGCGTGGGAGCCCGCGAAGGAAAGAAAAA
TGCGCACCGGCATCAGCAGGGCGGGAAAAGAGATCCGCAAGGCAGATAAG
CGGCACCGCTCTCAGGCAAGGGTCTTGCGCCTTGTGTCGGGCACGCCTTC
TTTTGTGCTGGTATGCAGCAGCTGCTTGGCTGGCTTTGATGCGATCTCAT
GGAAGTTTTTTGCTGTTGTTGATCTCGCGCCGGATGTCTGGAAGGAACCG
CCATTGCTGCCGTCCGGTAAGGCGTTCTCAAACATACATTTTTAGGAGTG
TATTTTTAACAATGATACCGGGGATAAGAGAGATGGGATGGTCCCTTGTG
ACCACAGACGGACGTTGGGAAAAAAAATGGTCGTTTCGCTGAAAATCGCT
CCGAGCTAACGCCTGAGAGCGCTTGCAGCACTCCAATCGGCAAGCACGTT
GCACATCACTGCTAAGGTTCCTTCCCCTCCCCCCTTCCCTGAAGCCGAAA
TATTTTTACTTGCACGAATGGAACGAAACACTGGTGTTAAAAAACGTGTA
TTTACTCGTAGGCCGAAGGGATCCACCCCAACGTGCGACAACGGTGAGCT
TTTAACCATCGCCCCCCCCTGTACCCTCTGCCGCCGTTATTGCCGACGCC
TCCACCACTACAACAGGTCAAGGCGGGTCGCAGCAAATTAGGCTCGAGAG
ATTTCGACTAGGATTTATTTGTTTTTCTGGTTGCCGTTTTCTTGCCTGAA
GTGCCTAGCGCTTGTACGCGACGCAAGATACTTGGAAGGGACAAGTTTTT
GTGTGATGTTACAATCACAGCTACACAACAACAGAGCAGTCAATGTGATT
TACGGGGAGCGCTGGTCTGAACGCAAACGCCTCTCCCGGGCGGAGAGCAT
GCGATGTCGTCCATCCCTGTCTAGCTAGGATCGGAGAAGTTGTTAGCGGT
CAGTGCTCGCTAGGTAGCCCGCGAGACAGCAGCTACAGTACAGCCGCACT
GCGCTGCTGAGGTGTAGTTGTATCGTGTTGCACGGCATGGTTTCGTTGTG
GCCTATGTATGTAGTAGCTGTTTCAGCCCGGTCGGTCGCGAATATTCAGC
AAGTGTGACACCACGGTAAGCGTGTGCTAACCCTGCCTGTCCTGTGGTCT
CTTTAGTGTGATGGCGTTGCAGCCCGTGGAGAGAGGGCGTGTGTTTGTGT
GTGCGCGTGTATGTATTCTTTGACGAATTTTGGGGTGTTCCCCCCAGCAT
GTTGGTTACCCGCGCCTCGCGGTGCGCGTCGTTGGTGGGAGCGACGTGGG
CGTGTGACAAGAAGCATTCGACAGCGAGCGCTTCTTGGTCACAGCATGTT
ATTGACTGTTGGAGGAGTTTGTGGGCACGCTCTCCTGACCCTTCCTTCTT
TTGTCACAACGGTCTTCGAGCCACGGGGGACGGCGCCTGGAGAACGGGCG
ATGAGGGAGACTCGGAGTGGGTTTGTTGCTGTGCCTCTNNNNNNNNNNTT
GTTTGTTATTTGTCCTCGGCCTGGGCTACCACTCTCACTTCCCGCGCTCG
TTGCTGAAGGTGTGTCTTTCTTTTTCATGTGTGTCTTTAGTCTATTTTAT
TTCTGTTTGCGTAACGGTTGCCAGACCCGCGGGTGCGCTGTGCCTTCCCT
GCTGTAGGAGAGGGGTTCGTTCTTCTCCTCTCTGTATTTTTTTGTTTTCT
TTCCTTAGCAGGTCCAAGTTCCGAGGCATGCCCCCCTCTGTTTCCGAGAG
TTAGTTGATGACATTTCCTTCTTTGTATGTACTATTATATAACGATACAG
GTAATGCCGTGTTTTTTTTTCCGATCTCTCGATTTTTCTTATGTGACGAC
GAGCGGGATCGGCAACCATTGGTGGGCCGGTCGGTTGTATGTGTGATACT
CATAATCATACTGTAAT
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Coding sequence (CDS) from alignment at S-dermatodea_contig1234:10921..17237+

>mRNA_S-dermatodea_contig1234.1473.1 ID=mRNA_S-dermatodea_contig1234.1473.1|Name=mRNA_S-dermatodea_contig1234.1473.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=894bp|location=Sequence derived from alignment at S-dermatodea_contig1234:10921..17237+ (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGCACGACAGCGGACCCTACAAGCCCGACCGTGTGGGGGAGATTCCCGA
GGATCAGCTGCAGATGTCCTTTACGCGATGCACGACAGCGGACCCTACAA
GCCCGACCGTGTGGGGGAGATTCCCGAGGATCAGCTGCAGATGTCCTTTA
CGCGGTCCTCTGGCGCCGGAGGGCAAAACGTGAACAAGCTCAGCACCAAG
GTGGAGTTGCGCTTCGTTGTCGGAGAGGCCGAATGGCTGCCGCACGACGT
GCGCCTGCGGCTGGCGAGGCATCAGAGCGGTCGGGTAAACGGGCGAGGGG
AGCTTGTCATCACGTGTCAGGAATTCAGGTCCTCTGGCGCCGGAGGGCAA
AACGTGAACAAGCTCAGCACCAAGGTGGAGTTGCGCTTCGTTGTCGGAGA
GGCCGAATGGCTGCCGCACGACGTGCGCCTGCGGCTGGCGAGGCATCAGA
GCGGTCGGGTAAACGGGCGAGGGGAGCTTGTCATCACGTGTCAGGAATTC
AGAACGCAGAAGCAAAACCGGTCTGCGGCGCTGCAGAAGCTGCGAGCGAT
GATCAACGAAGCGTGGGAGCCCGCGAAGGAAAGAAAAATGCGCACCGGCA
TCAGCAGGGCGGGAAAAGAGATCCGCAAGGCAGATAAGCGGCACCGCTCT
CAGAACGCAGAAGCAAAACCGGTCTGCGGCGCTGCAGAAGCTGCGAGCGA
TGATCAACGAAGCGTGGGAGCCCGCGAAGGAAAGAAAAATGCGCACCGGC
ATCAGCAGGGCGGGAAAAGAGATCCGCAAGGCAGATAAGCGGCACCGCTC
TCAGGTCAAGGCGGGTCGCAGCAAATTAGGCTCGAGAGATTTCGACTAGG
TCAAGGCGGGTCGCAGCAAATTAGGCTCGAGAGATTTCGACTAG
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