prot_S-dermatodea_contig12339.1471.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig12339.1471.1
Unique Nameprot_S-dermatodea_contig12339.1471.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length421
Homology
BLAST of mRNA_S-dermatodea_contig12339.1471.1 vs. uniprot
Match: D7FI05_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI05_ECTSI)

HSP 1 Score: 504 bits (1298), Expect = 1.560e-163
Identity = 290/424 (68.40%), Postives = 323/424 (76.18%), Query Frame = 0
Query:    1 CAPPLCFQGECVYNGVHEGYGCQAQPSGVTWRGDAYRYFQQVVDRADPVEQAAFLSEVQAAHKLSAVTMADDLPVENHAWGTEFPIFGTKYKDICISPNGVLLVPPLQNVASRGLSAVSPGTEALLPVLKADWNPGDSWASSSVLVLIEEGQFSVLYQDVFLFKRSASATPSTFSTTVFPDGSLRYRYIRIGDRADWVAGVSGNSFVSPTIRHRHVRQAEFIKMDHNGLPAAAASQSLDGPSPPLXXXXXXXXXXXXXXXXXXXXSDTA-ASXXXXXXXXXXXXXXXXXXPKVGQGSAALCRAPTVACLGRACGKAGSEVAVLWEGFGCRAVAPLNVTFACRFGGLEVPAVSLRG--FSSSSMIADGGWDGGETDSWGPGWVGEERGEGGVEEGLVCEVPRLEWVEFGQEQAVMVPVEVLWSLP 421
            C+   C +G CV+ GV EGYGCQAQP   TWRGD YRYFQ +VDRADPVEQA F++EV+A +KLS+VT ADD PVE H W  EFP++GTKY+D+ ISPNG L VPPLQ V   GLSAVSP TEA  PVLKADWNP DS A+SSVLV+IEE QFSVLYQDVFLFKRSASATPSTFSTTVFPDGSLRYRY+RIGD+ADW AGVSGNSFVSPTIR+RHVRQ++FI+MD NGLP+AAA       +P  XXXXXXXXXXXXXXXXXXXX D +                      + G     LCRAPT+ACL RACGKAGSEV VLWEG GCRA A LNVTF+CR GGLEVPAVSL G   +SSS    GG+   E ++WGP WVG   GEGG   GLVCEVPRLEW E GQ++AVMVPVEVLWSLP
Sbjct:  494 CSFDACVEGSCVHTGVQEGYGCQAQPVHATWRGDTYRYFQ-IVDRADPVEQAEFVAEVRAQNKLSSVTFADDYPVEFHNW-REFPVYGTKYEDVYISPNGALFVPPLQTVVPGGLSAVSPSTEAYFPVLKADWNPSDSRAASSVLVMIEEDQFSVLYQDVFLFKRSASATPSTFSTTVFPDGSLRYRYMRIGDKADWTAGVSGNSFVSPTIRNRHVRQSQFIQMDENGLPSAAAPSEAFSATPTXXXXXXXXXXXXXXXXXXXXXDDASEVQGEGGGSAVTIIANGDGAEEEDGDTEVTLCRAPTLACLARACGKAGSEVPVLWEGVGCRAAASLNVTFSCRIGGLEVPAVSLEGGATASSSGSLAGGF---EEEAWGPDWVG---GEGGG--GLVCEVPRLEWAEAGQDEAVMVPVEVLWSLP 907          
BLAST of mRNA_S-dermatodea_contig12339.1471.1 vs. uniprot
Match: A0A6H5LLL6_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LLL6_9PHAE)

HSP 1 Score: 449 bits (1156), Expect = 1.140e-146
Identity = 242/383 (63.19%), Postives = 274/383 (71.54%), Query Frame = 0
Query:   41 QVVDRADPVEQAAFLSEVQAAHKLSAVTMADDLPVENHAWGTEFPIFGTKYKDICISPNGVLLVPPLQNVASRGLSAVSPGTEALLPVLKADWNPGDSWASSSVLVLIEEGQFSVLYQDVFLFKRSASATPSTFSTTVFPDGSLRYRYIRIGDRADWVAGVSGNSFVSPTIRHRHVRQAEFIKMDHNGLPAAAASQSLDGPSPPLXXXXXXXXXXXXXXXXXXXXSDTA-ASXXXXXXXXXXXXXXXXXXPKVGQGSAALCRAPTVACLGRACGKAGSEVAVLWEGFGCRAVAPLNVTFACRFGGLEVPAVSLRGFSSSSMIADGGWDGG-ETDSWGPGWVGEERGEGGVEEGLVCEVPRLEWVEFGQEQAVMVPVEVLWSLP 421
            Q+VDRADPVEQA F++EV+A +KLS+VT ADD PVE H W  EFP++GTKY+D+ ISPNG L VPPLQ V   GLSAVSP TEA  PVLKADWNP DS A+SSVLV+IEE QFSVLYQDVFLFKRSASATPSTFSTTVFPDGSLRYRY+RIGD+ADW AGVSGNSFVSPTIR+RHVRQ++FI+MD NGLP+AAA       +P L                     D++                      +       LCRAPT+ACL RACGKAGSEV VLWEG GCRA A LNVTF+CR GGLEVPAV L G +++S  + G W GG E ++WGP W G E G G     LVCEVPRLEW E GQE+AVMVPVEVLWSLP
Sbjct:   18 QIVDRADPVEQAEFVAEVRAQNKLSSVTFADDYPVEFHNW-REFPVYGTKYEDVYISPNGALFVPPLQTVVPGGLSAVSPSTEAYFPVLKADWNPSDSRAASSVLVVIEEDQFSVLYQDVFLFKRSASATPSTFSTTVFPDGSLRYRYMRIGDKADWTAGVSGNSFVSPTIRNRHVRQSQFIQMDENGLPSAAAPPEAFSATPTLPPSPGAPVSTASNSSDSTSGDDSSEVQQWGEGEAVTIIANGDGAEEEDADTEVTLCRAPTLACLARACGKAGSEVPVLWEGVGCRAAASLNVTFSCRIGGLEVPAVGLGGETTTS--SSGSWAGGFEEEAWGPYWAGGEVGGG-----LVCEVPRLEWAEAGQEEAVMVPVEVLWSLP 392          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig12339.1471.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FI05_ECTSI1.560e-16368.40RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5LLL6_9PHAE1.140e-14663.19RING-type domain-containing protein n=1 Tax=Ectoca... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig12339contigS-dermatodea_contig12339:1924..6304 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig12339.1471.1mRNA_S-dermatodea_contig12339.1471.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig12339 1924..6304 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig12339.1471.1 ID=prot_S-dermatodea_contig12339.1471.1|Name=mRNA_S-dermatodea_contig12339.1471.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=421bp
CAPPLCFQGECVYNGVHEGYGCQAQPSGVTWRGDAYRYFQQVVDRADPVE
QAAFLSEVQAAHKLSAVTMADDLPVENHAWGTEFPIFGTKYKDICISPNG
VLLVPPLQNVASRGLSAVSPGTEALLPVLKADWNPGDSWASSSVLVLIEE
GQFSVLYQDVFLFKRSASATPSTFSTTVFPDGSLRYRYIRIGDRADWVAG
VSGNSFVSPTIRHRHVRQAEFIKMDHNGLPAAAASQSLDGPSPPLPSPDA
PASSSSSSSNSNASASDTAASSTRRPSSSDSAAGGGGGGPKVGQGSAALC
RAPTVACLGRACGKAGSEVAVLWEGFGCRAVAPLNVTFACRFGGLEVPAV
SLRGFSSSSMIADGGWDGGETDSWGPGWVGEERGEGGVEEGLVCEVPRLE
WVEFGQEQAVMVPVEVLWSLP
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