prot_S-dermatodea_contig12338.1470.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig12338.1470.1
Unique Nameprot_S-dermatodea_contig12338.1470.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length107
Homology
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BLAST of mRNA_S-dermatodea_contig12338.1470.1 vs. uniprot
Match: A0A7S3K2A4_9STRA (Hypothetical protein (Fragment) n=2 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K2A4_9STRA)

HSP 1 Score: 50.4 bits (119), Expect = 8.640e-6
Identity = 23/43 (53.49%), Postives = 31/43 (72.09%), Query Frame = 0 
Query:    7 GAEHPEVATRLNSLALLLASDGRVEEAEDLHRRALDIARKVYG 49
            G  HP VAT L++LALLL++ G  +EA+ L+ RA+DI  K YG
Sbjct:    1 GPNHPNVATTLSNLALLLSAQGNYDEAKPLYERAIDIDEKTYG 43
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig12338.1470.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A7S3K2A4_9STRA8.640e-653.49Hypothetical protein (Fragment) n=2 Tax=Aureoumbra... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002151Kinesin light chainPRINTSPR00381KINESINLIGHTcoord: 89..106
score: 30.45
coord: 54..74
score: 50.95
coord: 10..27
score: 48.89
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 14..47
e-value: 1.7
score: 17.6
coord: 56..89
e-value: 39.0
score: 9.8
NoneNo IPR availablePFAMPF13424TPR_12coord: 16..87
e-value: 1.2E-18
score: 67.2
NoneNo IPR availablePANTHERPTHR45783:SF3KINESIN LIGHT CHAINcoord: 6..105
NoneNo IPR availablePANTHERPTHR45783FAMILY NOT NAMEDcoord: 6..105
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 2..106
e-value: 4.2E-35
score: 123.2
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 9..104

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig12338contigS-dermatodea_contig12338:4426..5818 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig12338.1470.1mRNA_S-dermatodea_contig12338.1470.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig12338 4426..5820 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig12338.1470.1 ID=prot_S-dermatodea_contig12338.1470.1|Name=mRNA_S-dermatodea_contig12338.1470.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=107bp
MSVDSQGAEHPEVATRLNSLALLLASDGRVEEAEDLHRRALDIARKVYGP
EHADVATYLNNLARVLKAQDKLAEAEPLQRAALAIGERMLGTNHSDVATY
YNNLSR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002151Kinesin_light
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf