mRNA_S-dermatodea_contig12334.1469.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig12334.1469.1
Unique NamemRNA_S-dermatodea_contig12334.1469.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
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BLAST of mRNA_S-dermatodea_contig12334.1469.1 vs. uniprot
Match: D7G6D9_ECTSI (Arginyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6D9_ECTSI)

HSP 1 Score: 326 bits (835), Expect = 8.540e-98
Identity = 233/537 (43.39%), Postives = 288/537 (53.63%), Query Frame = 2 
Query:  104 LELKSLVEICGTYKSKCGYCKAESKTSVSFGVFARRLTCADYQALIDRGWRRSGTYIYKPVMHETCCPQYTIRLDATLFKPNKGQRQLRNKLRRYLASDTNRTTNSXXXXXXXXXXXSGQHKPDSREAFVSVPAGNGCRN-PKTEKRDSSQRRSSSGHRENSQRLEELSGRVTDAAIAAVEGGVVSGSGLGTEWLPDVAGWSQVRPIRSKNCKLSGGGFYTTVALSIASAARKRGWKRTGGAGGAVAIAEAIAGRVREAGAGGREGSAVVSGVTVAPNGFINFAAASGPSAEATQPPHSXXXXXXXXXXXXXXXXXXXXXXXXXXXXALDARKNLAPATERLLPLPPRDAMKRGSRDIAPDDRPASAAA----------------RXXXXXXXXXXSGSDGVSTDAVPARFAMGSS--VGAVCTGGNVPVGQVGVMEERGGAVAGAGLGEAAAVXXXAASMDWTNRLENGAGAMDVEVGTET--FGAAAAGGSGAITGLASLPPLDTGLASHQITVTTVPARVSDEVFRLYMKYQVS 1651
            +E +SLVEICGTY++KCGYCK ++KTSVS+G+ A+RLTCADYQ LIDRGWRRSGT++YKPVMHETCCPQYTIRLD T FK  KGQR + N+LRRYL  D +  +++            G           +       RN P+  +R      +    RENS+RL  LS  +  AA+AA+E G VSG G   E   +V GWSQVRPIR K+   SGGGF +TVAL IASAARK+GW   GG   AVAIAEA A ++R A +GG +G  V+S + VAPNGFINF A   PS  +    H+                             L AR + +P      P PP          + P+  P   A+                           SGS+    D  PA+  + SS    A+ T G V +GQ            G G   AAA    AA M+W  R  N  GAMDVE       F      GSG+ TGLASLP LD  + SH++TV+TVPARV+DEVFRLY+KYQVS
Sbjct:    1 MESRSLVEICGTYRTKCGYCKPDTKTSVSYGLLAKRLTCADYQELIDRGWRRSGTFVYKPVMHETCCPQYTIRLDVTRFKHTKGQRHVLNRLRRYLDGDKDAGSSTDAANG------QGDAXXXXXXXXXATNGRKKKRNLPQEAQRGKGVSENGDARRENSERLGALSEHIAVAALAAMESGAVSGLGFEPELRSEVLGWSQVRPIRIKSVLASGGGFCSTVALRIASAARKQGWHGVGGGXXAVAIAEATAEKLRVAASGGDKGL-VLSAIAVAPNGFINFEAGFAPSCTSASQNHAQLPPPNAL---------------------LQARASGSPTPPATPPSPPAPGFA-----LPPNIPPVGGASVRGAVASRSTVKPMPMEGDKPEGGDRSSGSETTGGDVNPAKAVLSSSGEAAALPTEG-VRLGQTRTTTGH----EGDGPFTAAAA---AARMEWIERQGNNEGAMDVEAAAAPNGFTPQTPSGSGSRTGLASLPRLDPAVESHRMTVSTVPARVTDEVFRLYVKYQVS 496
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BLAST of mRNA_S-dermatodea_contig12334.1469.1 vs. uniprot
Match: A0A0L0SYS0_ALLM3 (Arginyl-tRNA--protein transferase 1 n=1 Tax=Allomyces macrogynus (strain ATCC 38327) TaxID=578462 RepID=A0A0L0SYS0_ALLM3)

HSP 1 Score: 130 bits (327), Expect = 5.920e-29
Identity = 57/92 (61.96%), Postives = 72/92 (78.26%), Query Frame = 2 
Query:  116 SLVEICGTYKSKCGYCKAESKTSVSFGVFARRLTCADYQALIDRGWRRSGTYIYKPVMHETCCPQYTIRLDATLFKPNKGQRQLRNKLRRYL 391
            S++   G    +CGYCK+   TS+S+G +A  LTC DYQALIDRGWRRSG Y+YKP+MH+TCCPQYTI+LDA  F+P+K  RQ+ NKLRR+L
Sbjct:    5 SILSPLGADPHECGYCKSGRDTSISYGAWAHNLTCDDYQALIDRGWRRSGKYLYKPLMHKTCCPQYTIKLDALAFRPSKQHRQVLNKLRRFL 96
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BLAST of mRNA_S-dermatodea_contig12334.1469.1 vs. uniprot
Match: A0A0L0SNX1_ALLM3 (Arginyl-tRNA--protein transferase 1 n=1 Tax=Allomyces macrogynus (strain ATCC 38327) TaxID=578462 RepID=A0A0L0SNX1_ALLM3)

HSP 1 Score: 130 bits (326), Expect = 7.950e-29
Identity = 57/92 (61.96%), Postives = 72/92 (78.26%), Query Frame = 2 
Query:  116 SLVEICGTYKSKCGYCKAESKTSVSFGVFARRLTCADYQALIDRGWRRSGTYIYKPVMHETCCPQYTIRLDATLFKPNKGQRQLRNKLRRYL 391
            S++   G    +CGYCK+ + TS+S+G +A  LTC DYQALIDRGWRRSG Y+YKP+MH+TCCPQYTI+LDA  F+P K  RQ+ NKLRR+L
Sbjct:    5 SILSPLGADPHECGYCKSGADTSISYGAWAHNLTCDDYQALIDRGWRRSGKYLYKPLMHKTCCPQYTIKLDALAFRPAKQHRQVLNKLRRFL 96
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BLAST of mRNA_S-dermatodea_contig12334.1469.1 vs. uniprot
Match: W7TI13_9STRA (Arginine-trna-protein transferase 1 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TI13_9STRA)

HSP 1 Score: 120 bits (300), Expect = 1.660e-27
Identity = 57/103 (55.34%), Postives = 74/103 (71.84%), Query Frame = 2 
Query:  116 SLVEICGTYKSKCGYCKAESK-----TSVSFGVFARRLTCADYQALIDRGWRRSGTYIYKPVMHETCCPQYTIRLDATLFKPNKGQRQLRNKLRRYLASDTNR 409
            S+VE+CG +  +CGYC+++ +     TSVSFG+ A+RL C DYQALID GWRRSGTY+Y+PV  ETCCP YTIRL    FKP++ QR++   L R +A  T R
Sbjct:   35 SVVELCGRHVGRCGYCQSKGRKGQKYTSVSFGLSAQRLLCEDYQALIDLGWRRSGTYLYRPVNEETCCPCYTIRLRVDDFKPSRSQRKVAAHLHRLMALGTER 137
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BLAST of mRNA_S-dermatodea_contig12334.1469.1 vs. uniprot
Match: A0A397GK44_9GLOM (Arginyl-tRNA--protein transferase 1 n=1 Tax=Diversispora epigaea TaxID=1348612 RepID=A0A397GK44_9GLOM)

HSP 1 Score: 125 bits (313), Expect = 1.660e-27
Identity = 57/93 (61.29%), Postives = 68/93 (73.12%), Query Frame = 2 
Query:  113 KSLVEICGTYKSKCGYCKAESKTSVSFGVFARRLTCADYQALIDRGWRRSGTYIYKPVMHETCCPQYTIRLDATLFKPNKGQRQLRNKLRRYL 391
            +S V   G   S CGYC +E  TS  FG+ A  L C DYQALIDRGWRRSGTYIYKP +H++CCPQYTIRLDA  F+P+K QR+L N+  RY+
Sbjct:    4 QSFVRSYGFNGSSCGYCASEEATSHKFGISADTLLCQDYQALIDRGWRRSGTYIYKPFLHDSCCPQYTIRLDAMKFQPSKSQRKLINRFNRYV 96
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BLAST of mRNA_S-dermatodea_contig12334.1469.1 vs. uniprot
Match: A0A8H4AIN0_GIGMA (Arginyl-tRNA--protein transferase 1 n=2 Tax=Gigaspora margarita TaxID=4874 RepID=A0A8H4AIN0_GIGMA)

HSP 1 Score: 124 bits (310), Expect = 3.780e-27
Identity = 61/104 (58.65%), Postives = 73/104 (70.19%), Query Frame = 2 
Query:  116 SLVEICGTYKSKCGYCKAESKTSVSFGVFARRLTCADYQALIDRGWRRSGTYIYKPVMHETCCPQYTIRLDATLFKPNKGQRQLRNKLRR-----YLASDTNRT 412
            S V+  G+Y S+CGYC +   TS  FG+ A RLTC DYQ LIDRGWRRSGT+IYKP + ++CCPQYTIRLDAT F  +K QRQL N+  R     Y+ SD N T
Sbjct:    8 SFVQSHGSYASECGYCNSGEDTSHKFGLSAIRLTCQDYQDLIDRGWRRSGTFIYKPNLRDSCCPQYTIRLDATKFHASKSQRQLINRFNRFLEGTYVPSDANDT 111
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BLAST of mRNA_S-dermatodea_contig12334.1469.1 vs. uniprot
Match: A0A397V580_9GLOM (Arginyl-tRNA--protein transferase 1 n=1 Tax=Gigaspora rosea TaxID=44941 RepID=A0A397V580_9GLOM)

HSP 1 Score: 124 bits (310), Expect = 3.780e-27
Identity = 61/104 (58.65%), Postives = 73/104 (70.19%), Query Frame = 2 
Query:  116 SLVEICGTYKSKCGYCKAESKTSVSFGVFARRLTCADYQALIDRGWRRSGTYIYKPVMHETCCPQYTIRLDATLFKPNKGQRQLRNKLRR-----YLASDTNRT 412
            S V+  G+Y S+CGYC +   TS  FG+ A RLTC DYQ LIDRGWRRSGT+IYKP + ++CCPQYTIRLDAT F  +K QRQL N+  R     Y+ SD N T
Sbjct:    8 SFVQSHGSYASECGYCNSGEDTSHKFGLSAIRLTCQDYQDLIDRGWRRSGTFIYKPNLRDSCCPQYTIRLDATKFHASKSQRQLINRFNRFLEGTYVPSDANDT 111
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BLAST of mRNA_S-dermatodea_contig12334.1469.1 vs. uniprot
Match: A0A433DMI6_9FUNG (Arginyl-tRNA--protein transferase 1 n=1 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433DMI6_9FUNG)

HSP 1 Score: 122 bits (306), Expect = 2.250e-26
Identity = 57/92 (61.96%), Postives = 70/92 (76.09%), Query Frame = 2 
Query:  116 SLVEICGTYKSKCGYCKAESKTSVSFGVFARRLTCADYQALIDRGWRRSGTYIYKPVMHETCCPQYTIRLDATLFKPNKGQRQLRNKLRRYL 391
            SLV  CG   S CGYCK+   TS +FG++A  LTC DYQ LIDRGWRRSG Y+YKP + ++CCPQYTIRLDAT FKP+K QR++ +K  RY+
Sbjct:    9 SLVVNCGFNVSNCGYCKS-GDTSHTFGIWAHLLTCRDYQDLIDRGWRRSGHYVYKPNLRKSCCPQYTIRLDATQFKPSKSQRKIISKFNRYI 99
[Close]
BLAST of mRNA_S-dermatodea_contig12334.1469.1 vs. uniprot
Match: A0A1X2IG00_9FUNG (Arginyl-tRNA--protein transferase 1 n=1 Tax=Absidia repens TaxID=90262 RepID=A0A1X2IG00_9FUNG)

HSP 1 Score: 120 bits (302), Expect = 5.460e-26
Identity = 55/95 (57.89%), Postives = 68/95 (71.58%), Query Frame = 2 
Query:  116 SLVEICGTYKSKCGYCKAESKTSVSFGVFARRLTCADYQALIDRGWRRSGTYIYKPVMHETCCPQYTIRLDATLFKPNKGQRQLRNKLRRYLASD 400
            S+V I G   S CGYC  +  TS +FG++A  L+C DYQALIDRGWRRSG Y+YKP +  +CCPQYTIRLDAT FK  K QR++ +K  RY+  D
Sbjct:    8 SIVSIVGNNTSDCGYCNQDD-TSYTFGIWAHALSCTDYQALIDRGWRRSGKYVYKPDLRRSCCPQYTIRLDATEFKTTKSQRKILHKFNRYIHGD 101
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BLAST of mRNA_S-dermatodea_contig12334.1469.1 vs. uniprot
Match: A0A1J3CWP3_NOCCA (Arginyl-tRNA--protein transferase 1 (Fragment) n=1 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3CWP3_NOCCA)

HSP 1 Score: 112 bits (281), Expect = 7.300e-26
Identity = 49/93 (52.69%), Postives = 69/93 (74.19%), Query Frame = 2 
Query:  113 KSLVEICGTYKSKCGYCKAESKTSVSFGVFARRLTCADYQALIDRGWRRSGTYIYKPVMHETCCPQYTIRLDATLFKPNKGQRQLRNKLRRYL 391
            +S+V  CG   + CGYCK+ + +S+S G++   LT  DYQAL+DRGWRRSG ++YKP M +TCCP YTIRL A+ F P+K Q+++R +L RY+
Sbjct:   23 ESIVADCGRNTNTCGYCKSPTSSSISHGLWTESLTVNDYQALLDRGWRRSGCFLYKPEMDKTCCPAYTIRLKASDFVPSKEQQRVRRRLERYI 115
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig12334.1469.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6D9_ECTSI8.540e-9843.39Arginyltransferase n=2 Tax=Ectocarpus TaxID=2879 R... [more]
A0A0L0SYS0_ALLM35.920e-2961.96Arginyl-tRNA--protein transferase 1 n=1 Tax=Allomy... [more]
A0A0L0SNX1_ALLM37.950e-2961.96Arginyl-tRNA--protein transferase 1 n=1 Tax=Allomy... [more]
W7TI13_9STRA1.660e-2755.34Arginine-trna-protein transferase 1 n=1 Tax=Nannoc... [more]
A0A397GK44_9GLOM1.660e-2761.29Arginyl-tRNA--protein transferase 1 n=1 Tax=Divers... [more]
A0A8H4AIN0_GIGMA3.780e-2758.65Arginyl-tRNA--protein transferase 1 n=2 Tax=Gigasp... [more]
A0A397V580_9GLOM3.780e-2758.65Arginyl-tRNA--protein transferase 1 n=1 Tax=Gigasp... [more]
A0A433DMI6_9FUNG2.250e-2661.96Arginyl-tRNA--protein transferase 1 n=1 Tax=Jimger... [more]
A0A1X2IG00_9FUNG5.460e-2657.89Arginyl-tRNA--protein transferase 1 n=1 Tax=Absidi... [more]
A0A1J3CWP3_NOCCA7.300e-2652.69Arginyl-tRNA--protein transferase 1 (Fragment) n=1... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig12334contigS-dermatodea_contig12334:468..6186 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score330.1
Seed ortholog evalue2e-87
Seed eggNOG ortholog2880.D7G6D9
Preferred nameate-1
KEGG rclassRC00055,RC00064
KEGG koko:K00685
KEGG ReactionR03862
GOsGO:0001101,GO:0003674,GO:0003824,GO:0004057,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0006950,GO:0006952,GO:0007275,GO:0007568,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009605,GO:0009607,GO:0009620,GO:0009719,GO:0009725,GO:0009737,GO:0009894,GO:0009987,GO:0010029,GO:0010033,GO:0010150,GO:0016598,GO:0016740,GO:0016746,GO:0016755,GO:0019216,GO:0019222,GO:0019538,GO:0019941,GO:0030163,GO:0032501,GO:0032502,GO:0033993,GO:0036211,GO:0042221,GO:0043170,GO:0043207,GO:0043412,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044464,GO:0048366,GO:0048367,GO:0048580,GO:0048731,GO:0048827,GO:0048856,GO:0050789,GO:0050793,GO:0050832,GO:0050896,GO:0050994,GO:0051239,GO:0051603,GO:0051704,GO:0051707,GO:0065007,GO:0071704,GO:0080090,GO:0090693,GO:0097305,GO:0098542,GO:0099402,GO:0140096,GO:1900140,GO:1901564,GO:1901565,GO:1901575,GO:1901700,GO:2000026
EggNOG free text desc.arginyltransferase activity
EggNOG OGsCOG2935@1,KOG1193@2759
EC2.3.2.8
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03016
Hectar predicted targeting categoryother localisation
Exons6
Model size1651
Cds size1635
Stop0
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924244.1125138-UTR-S-dermatodea_contig12334:467..4831622924244.1125138-UTR-S-dermatodea_contig12334:467..483Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig12334 468..483 +
1694079120.297415-UTR-S-dermatodea_contig12334:467..4831694079120.297415-UTR-S-dermatodea_contig12334:467..483Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig12334 468..483 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924244.1230764-CDS-S-dermatodea_contig12334:483..6221622924244.1230764-CDS-S-dermatodea_contig12334:483..622Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12334 484..622 +
1694079120.30979-CDS-S-dermatodea_contig12334:483..6221694079120.30979-CDS-S-dermatodea_contig12334:483..622Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12334 484..622 +
1622924244.131917-CDS-S-dermatodea_contig12334:1257..13821622924244.131917-CDS-S-dermatodea_contig12334:1257..1382Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12334 1258..1382 +
1694079120.3173163-CDS-S-dermatodea_contig12334:1257..13821694079120.3173163-CDS-S-dermatodea_contig12334:1257..1382Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12334 1258..1382 +
1622924244.1423209-CDS-S-dermatodea_contig12334:3436..38651622924244.1423209-CDS-S-dermatodea_contig12334:3436..3865Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12334 3437..3865 +
1694079120.325118-CDS-S-dermatodea_contig12334:3436..38651694079120.325118-CDS-S-dermatodea_contig12334:3436..3865Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12334 3437..3865 +
1622924244.151964-CDS-S-dermatodea_contig12334:4382..46491622924244.151964-CDS-S-dermatodea_contig12334:4382..4649Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12334 4383..4649 +
1694079120.3330133-CDS-S-dermatodea_contig12334:4382..46491694079120.3330133-CDS-S-dermatodea_contig12334:4382..4649Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12334 4383..4649 +
1622924244.1632574-CDS-S-dermatodea_contig12334:5086..56041622924244.1632574-CDS-S-dermatodea_contig12334:5086..5604Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12334 5087..5604 +
1694079120.3489873-CDS-S-dermatodea_contig12334:5086..56041694079120.3489873-CDS-S-dermatodea_contig12334:5086..5604Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12334 5087..5604 +
1622924244.174674-CDS-S-dermatodea_contig12334:6029..61861622924244.174674-CDS-S-dermatodea_contig12334:6029..6186Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12334 6030..6186 +
1694079120.3608544-CDS-S-dermatodea_contig12334:6029..61861694079120.3608544-CDS-S-dermatodea_contig12334:6029..6186Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12334 6030..6186 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig12334.1469.1prot_S-dermatodea_contig12334.1469.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig12334 484..6186 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig12334.1469.1

>prot_S-dermatodea_contig12334.1469.1 ID=prot_S-dermatodea_contig12334.1469.1|Name=mRNA_S-dermatodea_contig12334.1469.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=545bp
MATPQHGRQRPRAANGLRQSRPSIPECLDLELKSLVEICGTYKSKCGYCK
AESKTSVSFGVFARRLTCADYQALIDRGWRRSGTYIYKPVMHETCCPQYT
IRLDATLFKPNKGQRQLRNKLRRYLASDTNRTTNSSSSSSSASASASGQH
KPDSREAFVSVPAGNGCRNPKTEKRDSSQRRSSSGHRENSQRLEELSGRV
TDAAIAAVEGGVVSGSGLGTEWLPDVAGWSQVRPIRSKNCKLSGGGFYTT
VALSIASAARKRGWKRTGGAGGAVAIAEAIAGRVREAGAGGREGSAVVSG
VTVAPNGFINFAAASGPSAEATQPPHSPPHAESAPAAAEAATPPATPPPP
PTPPPALDARKNLAPATERLLPLPPRDAMKRGSRDIAPDDRPASAAARVG
ARGGSQGGSGSDGVSTDAVPARFAMGSSVGAVCTGGNVPVGQVGVMEERG
GAVAGAGLGEAAAVAAAAASMDWTNRLENGAGAMDVEVGTETFGAAAAGG
SGAITGLASLPPLDTGLASHQITVTTVPARVSDEVFRLYMKYQVS
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mRNA from alignment at S-dermatodea_contig12334:468..6186+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig12334.1469.1 ID=mRNA_S-dermatodea_contig12334.1469.1|Name=mRNA_S-dermatodea_contig12334.1469.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=5719bp|location=Sequence derived from alignment at S-dermatodea_contig12334:468..6186+ (Saccorhiza dermatodea SderLu1190fm monoicous)
GCCGGGGATCAGGACAATGGCGACACCACAGCACGGCAGGCAGCGTCCAA
GAGCAGCCAATGGATTACGTCAGTCACGCCCTTCGATTCCGGAGTGCTTG
GACTTGGAATTGAAGTCGCTTGTGGAGATATGCGGGACTTACAAGTCCAA
GTGCGGTAAGCAAAGAGCAAGAAATAACAATATATACTCTCTGTATTTAC
ATACAATTAATGTGCCATTCATTGTTTTCTTGCTGTATTTCATTTCGGAA
TGCTGCCGAGCCTCTGCAGAGCAGAGGAGGTGCTCCGGGCTGTAGCGCTA
TTATAATGCCAAGACTAACTGTGCTCTCGCATCTGAGACCCCCCAGAGAT
GGCCATGCATGCCAACCCTCGGTATTCTTCGCCAACTAAAGCGGGTTCCG
CTTTGCAAACACCGGCCTTGTGTTCCACCCCCTGTCCGCTGGGTGAGCAG
CACACCCAGCACCATTTCCTCCGCTGTTCAGACTACAGCAGTATCATACT
GTTGTAGAAGTATGAATACACAGCAGTGTAGAAATTATCCCGATGACAGG
TGTATCTGTGTATGATATGATACATACCAGTTACCTCGCAAGACTGGCGG
CCGCAATCCCCTGAAACCGTGGGATCGCAGGAGGCGTTTAACCCGACACC
GCCCTGACGTGCCTGTGTTCGCATCTGCCGCTCGTCTCCGTGGTTTGTTT
TGCTCTGCTGCTTTTTCGTTTCGCAATCGGCTGGCTGACTGACTGGCTGT
CTGACTGGCTTGCCTGGCTGGCTTGCCTGGCCGCACGCAGGGTATTGCAA
GGCCGAGAGCAAGACATCGGTGTCGTTCGGCGTGTTCGCGAGACGGCTGA
CCTGCGCTGATTACCAGGCGCTAATCGACAGAGGCTGGCGGCGTTCGGGG
ACCTACATCTACAAGGTGGAGACACGCTGGATTTGATTCCATATTTTGTA
TTTTCGCAAAGCTTATCTGTTATGTTCGGTCGACATGATTGATGTCTTGC
GTTTTTTTTTCAAATTGCTCTATCATACGACCGGGGTGTTTTGACTGATT
GATTTTGATTGATTGATTGATTGATTTGCACACGTATAGCCGATCGGCAT
AATNNNNNNNNNNACTAATCAGAATTCTACTTCTACTATACACCGTACCG
CCCCTGATACTTGCTATGGTAAAAGAAATAGGACTACGTACAATTAATAC
TGACTCCTTCGTATACACAAAAACATTTTTCGTGTGGTGGGCGCCAAAAT
AAGCTTCCAAGTACAGTACTACAGAGTTACAGTAATTTGTACCTGGTACC
GATTTTGGTATTATAGCAGACACCACCTGTTCTCCTACTAAATATAGACT
GCTGTCGCTTTTATTAATAGTGTGGTTGTTCGATGAAGTACTAAATTTGA
CGTCGCGCGGATGCTTCCCGACGTACGGTACACACGAGACTCTCACGAAA
GTCTGGCAACCAGCAGGATACGTACACACTCTACCGATACAGATGCCGTG
CCAGGTGCTTGCTGTGCGGCCCGGCCCGACTTGGCTGTGATTTGCGCAGG
ATTTGTTAGTTTCTGGGTATCATGTGATAGAGACAATTGCTTCTATTACA
GTAGTATTAATATAATAGTACATGTTATATGATACAGATTGCCGAAATGG
TGAGCCCGTCCTCTCGCGCGGGGTTCCCTTTGTTTTCATACATACCGTGG
GCGGCGCTAATAGGCACTTCTCTCTTCTTTACCGCGGGCGCTTTGCTCCT
TCAACTTAATTATATAGCCGCGAACCGAAGTGGTAATCGGAAGATATGTT
ATATTATACCTATTTATTATATTATACTGCTGTACAGTACTAGTACACAA
CAAGTGCAAGTACAAGAGTACAACTATGAAACATTCACATTCGGCACGAT
AGCGACGAATACACCGGTCGCCAGCACACACACCAGCCCAGCGGTATTAA
TATTTCAGAGGTATTGATACTACAGCTGTAGAAAAAGTATTATACATATA
ATATTACGGAGGTAAATATTGTAGTAATAGTAATAGTAATGAGGACCAAA
TACCACTACCATGAATGCCCAGCCGTTCCGGCCATGAACAGTAACAGTTG
GAGTACCTCATGAAAACAAAAACGTGAGGTTTGGCCTATATATTACAGAT
TATGTCATCATCGACCATGAATGAATACCCAATAATTTCTGGCCTATACG
CTTTTTTCGGTGGTATCATACGTAATGACGAATTTGGACCTGATAACTCT
GTTCCCCTACGTAATACTGTAGTATAGTCAGGACCAAATGTGCCAAGCAG
TATGCCCAACATTCAGAAAAATCGTAAATCAACCTCTGACCTTGTCTGGC
CTTGCAACATCTGCGATCGATCTTCTGGCCTGAAATGTCACTCTAAACCC
CAACAAAATCTTGAAAGGTATTCGGGCCAAAGTCTTTAGAACCAGGATTT
GACTACTGTACGTTATTTCAGCACAATTTTGGTCCTGATTACTGTTTACC
TCTGTAATAGTATAGTATATTATATACCAGGTACGTGAGTACTGTCTGTG
GTACCGCGCGCCCCGTGGTTGAACTGGTTGACCATCAGCCCAGTAGGCGG
AGGACCCGGGTTCAAATCCCGGCACAGTCGATATGTATGTTACATTTATT
TTCTCTCACCTCCGCTGCGGAAAGCGCTATTAATAGAGCGTGAGTAACGC
AAAAAATACAAAACACGAGAAATCGGCGAGCTGAGGAAGTGCCGAACCCA
ACGCGCGATAAAAATCAAAGGTGAGAACTGGGGATAAGAGAGATGGGATG
ATCCCTTGTGACCACAGACGGACCTCGGAAAAGAAAGTCTATATATAATA
TGTGTGCCAACATCAACAACAGCAACAACAACAAATGTATATGTGACGAC
TTCCCCCTTTTCCCTACAACCCACCGCGCTCCTGCCCCTTCACCCTGGTG
TCGTTGCCGCCGGGTACAGCCCGTGATGCACGAGACTTGCTGCCCTCAGT
ACACCATCCGTCTCGACGCCACCCTCTTCAAGCCCAACAAGGGGCAGCGT
CAACTGCGCAACAAGTTGAGACGATACCTCGCCAGCGACACCAACAGAAC
CACCAACAGCAGCAGCAGCAGCAGCAGCGCCAGCGCCAGCGCCAGTGGCC
AACATAAGCCGGACTCCCGAGAAGCATTTGTCTCTGTGCCCGCCGGAAAT
GGCTGTAGAAACCCGAAAACCGAGAAACGCGATTCTTCCCAGAGGCGCAG
CAGTAGTGGGCATCGGGAGAACTCACAGAGACTGGAAGAGTTGAGCGGGA
GGGTGACGGATGCCGCGATCGCCGCGGTGGAAGGCGGGGTGGTATCTGGG
TCGGGGCTGGGAACGGAATGGCTGCCTGATGTTGCCGGTTGGTCGCAGGT
AAGCGGGGTGAGGCGTGTGGACCTTGTTTTTGTCGGGGGGGGGGGGTGGG
GGGGGTGATGGCGGGGTGTTGGCTGGCTCTCTCTCGCGTGGTGCGCGCTT
CGCAGAGGATGCGCGTTTGTTCGTGGGTCCCTTGCGGATTGACGTGCGTC
ATGTTATGCCTTGGGCCCCAGGAGGTTCTAACGGCATATCCCACTTTTGC
GCATATTGTCGAATTCGAATGAACCAACCCTTCGTGTTGTTAATACAAGT
GTCGAAAAGGAAAGAGCGAACAGCTCGAACACTCGTCTACTTCAGGATAA
TACCCGAGTTTCTACTTGACAGCAGAATCCATTCGCAACAAGGCCATCCC
GCTGTTAGGTAGGTAGGTACCAGTAAAGGTGTGTAGCTGTGCTCTTTACG
CTACCCTCTGTCCCCTCCCTCTGGCAAATCAATCACAAACTCGAACCGAG
CACGAAGTGAAATGCTCTTCCTGCCGTGGCTCCTTCCCTCTACCGCTATC
GATCCCTGTACCAAGGTGAGACCCATTCGAAGCAAGAACTGCAAATTGTC
GGGCGGAGGCTTCTACACCACCGTGGCGCTCAGTATCGCCTCTGCCGCGC
GGAAAAGAGGCTGGAAGAGAACCGGAGGCGCCGGTGGGGCCGTGGCCATC
GCCGAAGCCATCGCAGGGCGCGTAAGAGAAGCAGGGGCGGGGGGAAGAGA
AGGCAGCGCGGTGGTGTCTGGTGTCACCGTCGCGCCCAACGGCTTCATCA
ACTTCGCGGCGGCCTCTGGGCCCTCCGCAGAGGTGAGGAATCGTGCCCCA
AGAGCACGCCGTACCGCGCGCTGTGTACATGCCCCGCACTGCATCGATGC
AATGCGCGCATGTAAGCCGTCGAACCGAGCGACTGCACTCTGCATTAGCC
CCAGCCGTGTCCGACCGAAACACGTGGCACGGAAGCGGTTTTTTGCCTTA
CACGACCCCTCCAGATGATGGGTCCCGCCGGTTCATGTGGCTCTCCCCAT
GGTCTTTCTCCCCGTGCAGACCTGCGGTGACGGTCGGATGCAACGGCTGC
ATCGAAAAAGAACCGGCGCATCGGCGACGGTATCCCCCCCTCCCCCCTCT
TGACCACGTCCGTCCCGTGCCAAGTTGAGTTGTGCGGGCTTGCCCACCAG
CTCACGCCCTGAGCCATCCCCGCCGCACTTTGCTATCCACGCGCGCCGCC
TTGGTGTCGCTCAACACAGGCTACCCAGCCGCCGCACTCCCCGCCTCACG
CGGAGAGCGCTCCCGCGGCAGCAGAAGCCGCAACGCCCCCGGCAACGCCT
CCCCCGCCTCCAACACCCCCCCCGGCCCTCGACGCGCGGAAGAACCTAGC
ACCCGCGACGGAGCGCCTCCTTCCGCTCCCACCTCGTGACGCGATGAAAC
GCGGCAGCCGCGATATCGCCCCTGATGACAGGCCCGCGTCGGCGGCGGCG
AGGGTTGGAGCAAGGGGAGGGAGCCAAGGTGGCTCGGGGTCTGACGGTGT
AAGCACGGACGCTGTACCGGCGCGATTTGCGATGGGTTCTTCGGTGGGGG
CGGTGTGTACAGGCGGCAATGTCCCCGTGGGGCAGGTGGGAGTGATGGAG
GAACGAGGCGGCGCGGTTGCTGGGGCCGGGCTGGGAGAGGCGGCGGCGGT
GGCGGCGGCGGCGGCATCGATGGATTGGACCAATCGGCTGGAAAACGGCG
CGGGCGCGATGGACGTCGAGGTCGGTACAGAAACATTGTTTAGGGGGTTA
TAGGTGGCGGTGTTGATTGTGTTCGGGCGGGAAATGGGGGAACGGGACCA
GAGGGGTATGATGGGGTTTGAGTGAAGTAGGTTGGGAACATAGTCAGACC
GGGTGCGTAAATTTTGGTGTTTTTGTGGCAAGTGGCGTGGAACGAGAGAG
TCGACTCTGTCGCGATTTGTTGGAGACCTGCTGCAGCCGCGGACGGCAGC
AGCTGTATCTTAACCGCTGCTGAAGCAAACCGTGGGTCGGCACTCGACGT
GGCCTCCGACGCCTCCACGTGAACGCCAATCGACGAAGCAACAAGCTTCC
CCCGCCGCCGCAACCCCCTCTCCCTTAGCGCATGGCTTGTCCTAACGTTT
TTTTCTTCCACTGACCCATGCCTGCCTTTCGAACCGCTCTTTGGATAGTC
CCCTTTGGCGAGTGGGGCTGCAGCAGCCGGAGGGTCGGGGGCGATTACAG
GACTGGCTAGCTTGCCACCTCTTGATACAGGACTCGCGTCGCACCAAATC
ACTGTTACGACGGTGCCTGCGCGTGTCTCCGACGAAGTTTTTCGTCTGTA
CATGAAATACCAGGTCAGT
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Coding sequence (CDS) from alignment at S-dermatodea_contig12334:468..6186+

>mRNA_S-dermatodea_contig12334.1469.1 ID=mRNA_S-dermatodea_contig12334.1469.1|Name=mRNA_S-dermatodea_contig12334.1469.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=3270bp|location=Sequence derived from alignment at S-dermatodea_contig12334:468..6186+ (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGGCGACACCACAGCACGGCAGGCAGCGTCCAAGAGCAGCCAATGGATT
ACGTCAGTCACGCCCTTCGATTCCGGAGTGCTTGGACTTGGAATTGAAGT
CGCTTGTGGAGATATGCGGGACTTACAAGTCCAAGTGCGATGGCGACACC
ACAGCACGGCAGGCAGCGTCCAAGAGCAGCCAATGGATTACGTCAGTCAC
GCCCTTCGATTCCGGAGTGCTTGGACTTGGAATTGAAGTCGCTTGTGGAG
ATATGCGGGACTTACAAGTCCAAGTGCGGGTATTGCAAGGCCGAGAGCAA
GACATCGGTGTCGTTCGGCGTGTTCGCGAGACGGCTGACCTGCGCTGATT
ACCAGGCGCTAATCGACAGAGGCTGGCGGCGTTCGGGGACCTACATCTAC
AAGGGTATTGCAAGGCCGAGAGCAAGACATCGGTGTCGTTCGGCGTGTTC
GCGAGACGGCTGACCTGCGCTGATTACCAGGCGCTAATCGACAGAGGCTG
GCGGCGTTCGGGGACCTACATCTACAAGCCCGTGATGCACGAGACTTGCT
GCCCTCAGTACACCATCCGTCTCGACGCCACCCTCTTCAAGCCCAACAAG
GGGCAGCGTCAACTGCGCAACAAGTTGAGACGATACCTCGCCAGCGACAC
CAACAGAACCACCAACAGCAGCAGCAGCAGCAGCAGCGCCAGCGCCAGCG
CCAGTGGCCAACATAAGCCGGACTCCCGAGAAGCATTTGTCTCTGTGCCC
GCCGGAAATGGCTGTAGAAACCCGAAAACCGAGAAACGCGATTCTTCCCA
GAGGCGCAGCAGTAGTGGGCATCGGGAGAACTCACAGAGACTGGAAGAGT
TGAGCGGGAGGGTGACGGATGCCGCGATCGCCGCGGTGGAAGGCGGGGTG
GTATCTGGGTCGGGGCTGGGAACGGAATGGCTGCCTGATGTTGCCGGTTG
GTCGCAGCCCGTGATGCACGAGACTTGCTGCCCTCAGTACACCATCCGTC
TCGACGCCACCCTCTTCAAGCCCAACAAGGGGCAGCGTCAACTGCGCAAC
AAGTTGAGACGATACCTCGCCAGCGACACCAACAGAACCACCAACAGCAG
CAGCAGCAGCAGCAGCGCCAGCGCCAGCGCCAGTGGCCAACATAAGCCGG
ACTCCCGAGAAGCATTTGTCTCTGTGCCCGCCGGAAATGGCTGTAGAAAC
CCGAAAACCGAGAAACGCGATTCTTCCCAGAGGCGCAGCAGTAGTGGGCA
TCGGGAGAACTCACAGAGACTGGAAGAGTTGAGCGGGAGGGTGACGGATG
CCGCGATCGCCGCGGTGGAAGGCGGGGTGGTATCTGGGTCGGGGCTGGGA
ACGGAATGGCTGCCTGATGTTGCCGGTTGGTCGCAGGTGAGACCCATTCG
AAGCAAGAACTGCAAATTGTCGGGCGGAGGCTTCTACACCACCGTGGCGC
TCAGTATCGCCTCTGCCGCGCGGAAAAGAGGCTGGAAGAGAACCGGAGGC
GCCGGTGGGGCCGTGGCCATCGCCGAAGCCATCGCAGGGCGCGTAAGAGA
AGCAGGGGCGGGGGGAAGAGAAGGCAGCGCGGTGGTGTCTGGTGTCACCG
TCGCGCCCAACGGCTTCATCAACTTCGCGGCGGCCTCTGGGCCCTCCGCA
GAGGTGAGACCCATTCGAAGCAAGAACTGCAAATTGTCGGGCGGAGGCTT
CTACACCACCGTGGCGCTCAGTATCGCCTCTGCCGCGCGGAAAAGAGGCT
GGAAGAGAACCGGAGGCGCCGGTGGGGCCGTGGCCATCGCCGAAGCCATC
GCAGGGCGCGTAAGAGAAGCAGGGGCGGGGGGAAGAGAAGGCAGCGCGGT
GGTGTCTGGTGTCACCGTCGCGCCCAACGGCTTCATCAACTTCGCGGCGG
CCTCTGGGCCCTCCGCAGAGGCTACCCAGCCGCCGCACTCCCCGCCTCAC
GCGGAGAGCGCTCCCGCGGCAGCAGAAGCCGCAACGCCCCCGGCAACGCC
TCCCCCGCCTCCAACACCCCCCCCGGCCCTCGACGCGCGGAAGAACCTAG
CACCCGCGACGGAGCGCCTCCTTCCGCTCCCACCTCGTGACGCGATGAAA
CGCGGCAGCCGCGATATCGCCCCTGATGACAGGCCCGCGTCGGCGGCGGC
GAGGGTTGGAGCAAGGGGAGGGAGCCAAGGTGGCTCGGGGTCTGACGGTG
TAAGCACGGACGCTGTACCGGCGCGATTTGCGATGGGTTCTTCGGTGGGG
GCGGTGTGTACAGGCGGCAATGTCCCCGTGGGGCAGGTGGGAGTGATGGA
GGAACGAGGCGGCGCGGTTGCTGGGGCCGGGCTGGGAGAGGCGGCGGCGG
TGGCGGCGGCGGCGGCATCGATGGATTGGACCAATCGGCTGGAAAACGGC
GCGGGCGCGATGGACGTCGAGGTCGGTACAGAAACATTGCTACCCAGCCG
CCGCACTCCCCGCCTCACGCGGAGAGCGCTCCCGCGGCAGCAGAAGCCGC
AACGCCCCCGGCAACGCCTCCCCCGCCTCCAACACCCCCCCCGGCCCTCG
ACGCGCGGAAGAACCTAGCACCCGCGACGGAGCGCCTCCTTCCGCTCCCA
CCTCGTGACGCGATGAAACGCGGCAGCCGCGATATCGCCCCTGATGACAG
GCCCGCGTCGGCGGCGGCGAGGGTTGGAGCAAGGGGAGGGAGCCAAGGTG
GCTCGGGGTCTGACGGTGTAAGCACGGACGCTGTACCGGCGCGATTTGCG
ATGGGTTCTTCGGTGGGGGCGGTGTGTACAGGCGGCAATGTCCCCGTGGG
GCAGGTGGGAGTGATGGAGGAACGAGGCGGCGCGGTTGCTGGGGCCGGGC
TGGGAGAGGCGGCGGCGGTGGCGGCGGCGGCGGCATCGATGGATTGGACC
AATCGGCTGGAAAACGGCGCGGGCGCGATGGACGTCGAGGTCGGTACAGA
AACATTTGGGGCTGCAGCAGCCGGAGGGTCGGGGGCGATTACAGGACTGG
CTAGCTTGCCACCTCTTGATACAGGACTCGCGTCGCACCAAATCACTGTT
ACGACGGTGCCTGCGCGTGTCTCCGACGAAGTTTTTCGTCTGTACATGAA
ATACCAGGTCAGTTGGGGCTGCAGCAGCCGGAGGGTCGGGGGCGATTACA
GGACTGGCTAGCTTGCCACCTCTTGATACAGGACTCGCGTCGCACCAAAT
CACTGTTACGACGGTGCCTGCGCGTGTCTCCGACGAAGTTTTTCGTCTGT
ACATGAAATACCAGGTCAGT
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