prot_S-dermatodea_contig12333.1468.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig12333.1468.1
Unique Nameprot_S-dermatodea_contig12333.1468.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length125
Homology
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BLAST of mRNA_S-dermatodea_contig12333.1468.1 vs. uniprot
Match: D8LE96_ECTSI (Ubiquitin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LE96_ECTSI)

HSP 1 Score: 124 bits (312), Expect = 1.280e-30
Identity = 74/116 (63.79%), Postives = 89/116 (76.72%), Query Frame = 0 
Query:    2 IIFVTGLRGLTGNRAQTLERCVKNVKGGRAVVTSLKVMEAVLQLFRKEASSYERCSRSDVIHDLEAAYGLTELLLRELESYVASSRNA-FPDTSKPLSPAA------PAPLTVSSG 110
            I+ V GLRGL G+RAQTL+RCVKNV+ GRAVVTSLKV+EAVLQ + K+A+SYE  SR DVIH+LEA  GLTELLLRELESYVA SR++  P+ +   S AA      P+P  VS+G
Sbjct:  866 ILPVAGLRGLRGHRAQTLQRCVKNVEEGRAVVTSLKVLEAVLQNYPKDATSYEVLSRRDVIHNLEAESGLTELLLRELESYVAGSRSSTLPEDTSDGSLAADHSNNPPSPSPVSAG 981
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig12333.1468.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LE96_ECTSI1.280e-3063.79Ubiquitin domain-containing protein n=2 Tax=Ectoca... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig12333contigS-dermatodea_contig12333:1890..5113 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig12333.1468.1mRNA_S-dermatodea_contig12333.1468.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig12333 1888..5113 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig12333.1468.1 ID=prot_S-dermatodea_contig12333.1468.1|Name=mRNA_S-dermatodea_contig12333.1468.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=125bp
CIIFVTGLRGLTGNRAQTLERCVKNVKGGRAVVTSLKVMEAVLQLFRKEA
SSYERCSRSDVIHDLEAAYGLTELLLRELESYVASSRNAFPDTSKPLSPA
APAPLTVSSGCDGSISDGDRRPPGG
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