prot_S-dermatodea_contig12321.1463.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig12321.1463.1
Unique Nameprot_S-dermatodea_contig12321.1463.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length124
Homology
BLAST of mRNA_S-dermatodea_contig12321.1463.1 vs. uniprot
Match: A0A6H5JYA8_9PHAE (Sm domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JYA8_9PHAE)

HSP 1 Score: 73.9 bits (180), Expect = 2.890e-14
Identity = 35/36 (97.22%), Postives = 35/36 (97.22%), Query Frame = 0
Query:   89 APAQTAGGKRSPSDFLKTVLGRPVVVKLNSGIDYRG 124
            APAQT GGKRSPSDFLKTVLGRPVVVKLNSGIDYRG
Sbjct:   63 APAQTGGGKRSPSDFLKTVLGRPVVVKLNSGIDYRG 98          
BLAST of mRNA_S-dermatodea_contig12321.1463.1 vs. uniprot
Match: A0A448Z717_9STRA (Sm domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z717_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 2.670e-9
Identity = 27/33 (81.82%), Postives = 30/33 (90.91%), Query Frame = 0
Query:   92 QTAGGKRSPSDFLKTVLGRPVVVKLNSGIDYRG 124
            QT G KRSPSDFLK+VLGRP +VKLNSGI+YRG
Sbjct:   20 QTGGKKRSPSDFLKSVLGRPAIVKLNSGIEYRG 52          
BLAST of mRNA_S-dermatodea_contig12321.1463.1 vs. uniprot
Match: A0A7S2IZG2_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2IZG2_9EUKA)

HSP 1 Score: 58.2 bits (139), Expect = 1.530e-8
Identity = 30/39 (76.92%), Postives = 32/39 (82.05%), Query Frame = 0
Query:   86 AVAAPAQTAGGKRSPSDFLKTVLGRPVVVKLNSGIDYRG 124
            A AAPA     K +PSDFLKTVLGRPVVVKLNSG+DYRG
Sbjct:   23 APAAPA----AKSNPSDFLKTVLGRPVVVKLNSGVDYRG 57          
BLAST of mRNA_S-dermatodea_contig12321.1463.1 vs. uniprot
Match: A9T4B1_PHYPA (Predicted protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A9T4B1_PHYPA)

HSP 1 Score: 57.4 bits (137), Expect = 2.190e-8
Identity = 25/37 (67.57%), Postives = 31/37 (83.78%), Query Frame = 0
Query:   88 AAPAQTAGGKRSPSDFLKTVLGRPVVVKLNSGIDYRG 124
            AA AQ  G  ++P+DFLK++ GRPVVVKLNSG+DYRG
Sbjct:    5 AASAQPTGSAKTPNDFLKSIKGRPVVVKLNSGVDYRG 41          
BLAST of mRNA_S-dermatodea_contig12321.1463.1 vs. uniprot
Match: A0A1E7EU50_9STRA (Lsm6 protein-like protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EU50_9STRA)

HSP 1 Score: 55.8 bits (133), Expect = 1.090e-7
Identity = 28/37 (75.68%), Postives = 31/37 (83.78%), Query Frame = 0
Query:   88 AAPAQTAGGKRSPSDFLKTVLGRPVVVKLNSGIDYRG 124
            AAP  T   KR+PSDFLK+VLGRP VVKLNSGI+YRG
Sbjct:   16 AAPEDT---KRTPSDFLKSVLGRPAVVKLNSGIEYRG 49          
BLAST of mRNA_S-dermatodea_contig12321.1463.1 vs. uniprot
Match: A0A0L8G189_OCTBM (Sm domain-containing protein n=2 Tax=Octopus TaxID=6643 RepID=A0A0L8G189_OCTBM)

HSP 1 Score: 55.1 bits (131), Expect = 1.330e-7
Identity = 23/31 (74.19%), Postives = 29/31 (93.55%), Query Frame = 0
Query:   94 AGGKRSPSDFLKTVLGRPVVVKLNSGIDYRG 124
            +G K++PSDFLK ++GRPVVVKLNSG+DYRG
Sbjct:    2 SGRKQTPSDFLKQIIGRPVVVKLNSGVDYRG 32          
BLAST of mRNA_S-dermatodea_contig12321.1463.1 vs. uniprot
Match: A0A194YPW9_SORBI (Sm domain-containing protein n=1 Tax=Sorghum bicolor TaxID=4558 RepID=A0A194YPW9_SORBI)

HSP 1 Score: 55.5 bits (132), Expect = 1.410e-7
Identity = 26/36 (72.22%), Postives = 31/36 (86.11%), Query Frame = 0
Query:   90 PAQTAGGK-RSPSDFLKTVLGRPVVVKLNSGIDYRG 124
            PA  AGG  ++PSDFLK++ GRPVVVKLNSG+DYRG
Sbjct:   11 PASGAGGTVKTPSDFLKSIRGRPVVVKLNSGVDYRG 46          
BLAST of mRNA_S-dermatodea_contig12321.1463.1 vs. uniprot
Match: A0A0G4IMQ5_PLABS (Sm domain-containing protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IMQ5_PLABS)

HSP 1 Score: 54.7 bits (130), Expect = 1.790e-7
Identity = 24/28 (85.71%), Postives = 27/28 (96.43%), Query Frame = 0
Query:   97 KRSPSDFLKTVLGRPVVVKLNSGIDYRG 124
            KRSP+DFLKTVLGRPV VKLNSG++YRG
Sbjct:    3 KRSPADFLKTVLGRPVYVKLNSGVEYRG 30          
BLAST of mRNA_S-dermatodea_contig12321.1463.1 vs. uniprot
Match: A0A8J9X496_PHATR (Hypothetical protein (Fragment) n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9X496_PHATR)

HSP 1 Score: 54.3 bits (129), Expect = 1.900e-7
Identity = 25/28 (89.29%), Postives = 27/28 (96.43%), Query Frame = 0
Query:   97 KRSPSDFLKTVLGRPVVVKLNSGIDYRG 124
            KRSPSDFLK+VLGRPV VKLNSGI+YRG
Sbjct:    2 KRSPSDFLKSVLGRPVQVKLNSGIEYRG 29          
BLAST of mRNA_S-dermatodea_contig12321.1463.1 vs. uniprot
Match: A0A7S0FIP0_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FIP0_9STRA)

HSP 1 Score: 55.1 bits (131), Expect = 2.270e-7
Identity = 28/40 (70.00%), Postives = 31/40 (77.50%), Query Frame = 0
Query:   86 AVAAPA-QTAGGKRSPSDFLKTVLGRPVVVKLNSGIDYRG 124
            A A PA + A  KRSPSDFLK VLGRPV V+LNSG DY+G
Sbjct:   18 AAAVPADEAATNKRSPSDFLKAVLGRPVNVRLNSGTDYKG 57          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig12321.1463.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JYA8_9PHAE2.890e-1497.22Sm domain-containing protein n=2 Tax=Ectocarpus Ta... [more]
A0A448Z717_9STRA2.670e-981.82Sm domain-containing protein n=1 Tax=Pseudo-nitzsc... [more]
A0A7S2IZG2_9EUKA1.530e-876.92Hypothetical protein n=1 Tax=Haptolina brevifila T... [more]
A9T4B1_PHYPA2.190e-867.57Predicted protein n=2 Tax=Physcomitrium patens Tax... [more]
A0A1E7EU50_9STRA1.090e-775.68Lsm6 protein-like protein n=1 Tax=Fragilariopsis c... [more]
A0A0L8G189_OCTBM1.330e-774.19Sm domain-containing protein n=2 Tax=Octopus TaxID... [more]
A0A194YPW9_SORBI1.410e-772.22Sm domain-containing protein n=1 Tax=Sorghum bicol... [more]
A0A0G4IMQ5_PLABS1.790e-785.71Sm domain-containing protein n=1 Tax=Plasmodiophor... [more]
A0A8J9X496_PHATR1.900e-789.29Hypothetical protein (Fragment) n=2 Tax=Phaeodacty... [more]
A0A7S0FIP0_9STRA2.270e-770.00Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.30.30.100coord: 91..124
e-value: 6.5E-6
score: 27.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig12321contigS-dermatodea_contig12321:5653..6024 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig12321.1463.1mRNA_S-dermatodea_contig12321.1463.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig12321 5653..6024 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig12321.1463.1 ID=prot_S-dermatodea_contig12321.1463.1|Name=mRNA_S-dermatodea_contig12321.1463.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=124bp
TQPANCDTNTAKTNLDPCTRHYSSSTGPPAMTDSTVPPPPPPPKDDAVAA
AAKDAEGDEEGDEGEDVPMTTASAAAPPAATVAAVAVAAPAQTAGGKRSP
SDFLKTVLGRPVVVKLNSGIDYRG
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