mRNA_S-dermatodea_contig12317.1461.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig12317.1461.1
Unique NamemRNA_S-dermatodea_contig12317.1461.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
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BLAST of mRNA_S-dermatodea_contig12317.1461.1 vs. uniprot
Match: D8LLP2_ECTSI (Protein cereblon n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLP2_ECTSI)

HSP 1 Score: 386 bits (992), Expect = 1.640e-126
Identity = 242/448 (54.02%), Postives = 260/448 (58.04%), Query Frame = 2 
Query:    8 SPVGTTAEIRSGHGGTVGEDAEGLG-------LAVMARGRHRFRLVEDLGWRRGVRYWKVVISPDLCPGPLCAPLPRPFRA------------RCGSRHWAMATPRFVVDANSPGGLAARAASLLREQREPLPTGTAXXXXXXXXXXXXXXXAGREGGE--PGGDAGDGAQVVDFV-ATGEEAVSVAEGTAAGTRSGSGGGGPLAHAEGDWMPGRREKLDPTLFSFWLAANLPLDDDARQELLMLDSVVMRLRLEVKHLEQSRRRALCCAGCGSGIAWEGDVFTLPGAEGVVGAYVNPEGYVHQTVTVRDARNLVLRGPPEVEHSWFPGYAWTTAHCARCPGQGHLGWRFTAVNHGT----------RASL--SPPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXATGRMG----------GGLIRADSDLGPVAFYGLRRPSLVHER 1219
            SPVGTTAE+RSGHGG+  EDA+G G       LA+MARGRHRFRLVEDLGWRRGV YWKVVI PD CPG    P+PR FR             R G  HW MA PRF V ANSP  LAARAASLLREQREPLP G                   R GGE   G   G     VD   A  +E                          G  MP RR KLDPTLFSFWLAANLPLDDDARQELLMLDSVVMRLRLE+KHLEQSRRR LCCA C  G+AWEGDVFTLPGAEGVVGAYVNP GYVHQTVTVRDARNLVL G PE EHSWFPGYAWT  +CA C    HLGWRFTA+  G+          R+ L  S  P                              G +G          GG    + +LGP +F+GLRRP+LV  R
Sbjct:  157 SPVGTTAEVRSGHGGSA-EDADGGGEXXXXGGLAMMARGRHRFRLVEDLGWRRGVLYWKVVICPDHCPGTFRPPVPRAFREFPGTDRRGRRRRRDGGNHWPMAVPRFAVVANSPAVLAARAASLLREQREPLPHGAPSGAPQVEEE------GARNGGEGVSGNVGGXXXXXVDVSSAARDEGXXXXXXXXXXXXXXXXXXXXXXXXXG--MPRRRGKLDPTLFSFWLAANLPLDDDARQELLMLDSVVMRLRLEIKHLEQSRRRELCCASCDRGVAWEGDVFTLPGAEGVVGAYVNPTGYVHQTVTVRDARNLVLVGTPEEEHSWFPGYAWTCVYCAFC--NEHLGWRFTAIRPGSGEQEHRQRQQRSGLLSSGSPSSPRASPHSSSSLLPLPSPVAGGASGSGGRGALGSSRPATTATAGGEGVNEPELGPASFFGLRRPALVTPR 593
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BLAST of mRNA_S-dermatodea_contig12317.1461.1 vs. uniprot
Match: A0A6H5KP54_9PHAE (CULT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP54_9PHAE)

HSP 1 Score: 363 bits (933), Expect = 2.610e-117
Identity = 205/346 (59.25%), Postives = 219/346 (63.29%), Query Frame = 2 
Query:   26 AEIRSGHGGTV------GEDAEGLGLAVMARGRHRFRLVEDLGWRRGVRYWKVVISPDLCPGPLCAPLPRPFRA-----------RCGSRHWAMATPRFVVDANSPGGLAARAASLLREQREPLPTGTAXXXXXXXXXXXXXXXAGREGGEPGGDAGDGAQVVDFVATGEEAVSVAEGTAAGTRSGSGGGGPLAHAEGDWMPGRREKLDPTLFSFWLAANLPLDDDARQELLMLDSVVMRLRLEVKHLEQSRRRALCCAGCGSGIAWEGDVFTLPGAEGVVGAYVNPEGYVHQTVTVRDARNLVLRGPPEVEHSWFPGYAWTTAHCARCPGQGHLGWRFTAVNHGT 1012
            AE+RSG   +       GE  +G GLA+MARGRHRFRLVEDLGWRRGVRYWKVVI  D CPG    P+PR FR            R G  HW MA PRF V ANSP  LAARAASLLREQREPLP G                  G  G   GG                 + +  EG                      MP RR KLDPTLFSFWLAANLPLDD ARQELLMLDSVVMRLR+E+KHLE+SRRR LCCA C  G+AWEGDVFTLPGAEGVVGAYVNP GYVHQTVTVRDARNLVL G PE EHSWFPGYAWT A+CA C    HLGWRFTA+  G+
Sbjct:  222 AEVRSGXXXSAEDAAGGGEGGDGGGLAMMARGRHRFRLVEDLGWRRGVRYWKVVICSDHCPGTFQPPVPRAFREFPGTGRRGRRRRDGGNHWTMAVPRFAVVANSPAVLAARAASLLREQREPLPHGATSGAPQVEEGGARNGGEGVRGNVRGG----------XXXXXVSSAARVEGXXXXXXXXXXXXXXXXXXXXXGMPRRRGKLDPTLFSFWLAANLPLDDVARQELLMLDSVVMRLRVEIKHLEESRRRELCCASCNRGVAWEGDVFTLPGAEGVVGAYVNPTGYVHQTVTVRDARNLVLVGIPEEEHSWFPGYAWTCAYCAFC--MEHLGWRFTAIRPGS 555
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BLAST of mRNA_S-dermatodea_contig12317.1461.1 vs. uniprot
Match: A0A835YMI6_9STRA (Protein cereblon n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMI6_9STRA)

HSP 1 Score: 172 bits (435), Expect = 3.390e-44
Identity = 140/360 (38.89%), Postives = 185/360 (51.39%), Query Frame = 2 
Query:   14 VGTTAEIRSGHGGTVGEDAEGLGLAVMARGRHRFRLVEDLGWRRGVRYWKVVISPDLCPGPLCAPLPRPFRARCGSR-HWAMATPRFVVDANSPGGLAARAASLLREQREPLPTGT-----------------------------AXXXXXXXXXXXXXXXAGREGGEPGGDAGDGAQVVDFVATGEEAVSVAEGTAAGTRSGSGGGGPLAHAEGDWMPGRREKLDPTLFSFWLAANLPLDDDARQELLMLDSVVMRLRLEVKHLEQSRRRALCCAGCGSGIAWEGDVFTLPGAEGVVGAYVNPEGYVHQTVTVRDARNLVLRG-PPEVEHSWFPGYAWTTAHCARCPGQGHLGWRFTAV 1000
            VGT A + SG     G++     + V+ARG  RFR+   LG+R+G  +  V + PDL P P    L +PF A   +   W  + P F   A+ P  L A+A  LL+E    +                                  XXXXXXXXXXXXXXX            G  A+  + +   +    V++  A   R G G     A  EG  + G         FSFWLA++LPL DDARQ LL  +SVV RLR  V+HL+++ +  L CA C + IA     F++PGAEG VGAYVNP G+VHQT+T+R+ARN+ L+  PP    SWFPG+AWT A+C RC    HLGW+FT +
Sbjct:  111 VGTVAAVASG--ARAGDEQ----VVVLARGMRRFRITRLLGFRQGAPWCSVTVLPDLEPHPAHTVLRQPFAASAFNPVAWPSSAPPFAWLASCPALLVAQATRLLQETAAWVALSADDAAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAEARAAELLGLQDRLRGVSDQGAG--RVGGGXXXXAARGEGGGLMGGYAGSSAQEFSFWLASSLPLGDDARQALLETNSVVERLRAGVRHLQRAAKLPLRCAHCNTPIAQPSHAFSVPGAEGAVGAYVNPAGFVHQTITLREARNVRLQAVPPTATDSWFPGFAWTVAYCRRC--DAHLGWKFTPI 460
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BLAST of mRNA_S-dermatodea_contig12317.1461.1 vs. uniprot
Match: UPI0014581C3B (protein cereblon-like n=1 Tax=Pecten maximus TaxID=6579 RepID=UPI0014581C3B)

HSP 1 Score: 144 bits (364), Expect = 4.720e-35
Identity = 72/134 (53.73%), Postives = 87/134 (64.93%), Query Frame = 2 
Query:  599 DPTLFSFWLAANLPLDDDARQELLMLDSVVMRLRLEVKHLEQSRRRALCCAGCGSGIAWEGDVFTLPGAEGVVGAYVNPEGYVHQTVTVRDARNLVLRGPPEVEHSWFPGYAWTTAHCARCPGQGHLGWRFTAV 1000
            DP   S+W+  NLPLDD  R  LL +DS V RLR  +  +E+     LCC GCG  +A + DVF+L   EG +GAYVNP GYVH+T+TV  A NL L G P  EHSWFPGYAWT A C RC    H+GW+FT+ 
Sbjct:  317 DPVELSYWVTQNLPLDDGLRVNLLSIDSAVQRLRCALSIIEKCS--ILCCKGCGCQVANKRDVFSLS-IEGPLGAYVNPGGYVHETMTVHKAHNLNLIGRPSTEHSWFPGYAWTIAQCRRC--NSHMGWKFTST 445
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BLAST of mRNA_S-dermatodea_contig12317.1461.1 vs. uniprot
Match: A0A6P8IV65_ACTTE (Protein cereblon n=2 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8IV65_ACTTE)

HSP 1 Score: 142 bits (359), Expect = 1.460e-34
Identity = 76/153 (49.67%), Postives = 94/153 (61.44%), Query Frame = 2 
Query:  599 DPTLFSFWLAANLPLDDDARQELLMLDSVVMRLRLEVKHLEQSRRRALCCAGCGSGIAWEGDVFTLPGAEGVVGAYVNPEGYVHQTVTVRDARNLVLRGPPEVEHSWFPGYAWTTAHCARCPGQGHLGWRFTAVNHG---------TRASLSP 1030
            DP  FS+W+AANLPLDD  + ELL +DS   RLR E+K +   R   LCC  C + I ++ D+F +   +G + AYVNP G+VH+T+T   A  + LRG P  E+SWFPGYAWT A C  C    HLGWRFTAV  G         TRASL P
Sbjct:  281 DPIDFSYWVAANLPLDDSLKLELLYVDSTTERLRKELKMMY--RCSVLCCGDCNTTICYKNDLFCMS-LDGPLAAYVNPSGWVHETLTFYKATGVRLRGRPTAENSWFPGYAWTIAECMHC--HNHLGWRFTAVKKGLSPSKFWGLTRASLKP 428
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BLAST of mRNA_S-dermatodea_contig12317.1461.1 vs. uniprot
Match: UPI001CF4E721 (protein cereblon-like isoform X1 n=6 Tax=Acropora TaxID=6127 RepID=UPI001CF4E721)

HSP 1 Score: 142 bits (358), Expect = 2.750e-34
Identity = 72/140 (51.43%), Postives = 95/140 (67.86%), Query Frame = 2 
Query:  602 PTLFSFWLAANLPLDDDARQELLMLDSVVMRLRLEVKHLEQSRRRALCCAGCGSGIAWEGDVFTLPGAEGVVGAYVNPEGYVHQTVTVRDARNLVLRGPPEVEHSWFPGYAWTTAHCARCPGQGHLGWRFTAVNHGTRAS 1021
            PT FSFW+AAN+PLDDD R ++L +D    RLR E++ + +    A CC+ C + IA +GD+F++   +G +GAYVNP G VH+T+T   A++  LRG P  E+SWFPGYAWT A CA+C    HLGWRFTAV  G   S
Sbjct:  302 PTEFSFWVAANMPLDDDLRLQVLGIDCPTQRLRRELEIVRKCG--AFCCSECDTKIAEKGDLFSMS-LDGPLGAYVNPNGCVHETLTFYRAKSFRLRGRPTTENSWFPGYAWTIAECAQCGN--HLGWRFTAVKRGLSPS 436
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BLAST of mRNA_S-dermatodea_contig12317.1461.1 vs. uniprot
Match: A0A210QI98_MIZYE (Protein cereblon n=1 Tax=Mizuhopecten yessoensis TaxID=6573 RepID=A0A210QI98_MIZYE)

HSP 1 Score: 142 bits (357), Expect = 4.640e-34
Identity = 69/134 (51.49%), Postives = 87/134 (64.93%), Query Frame = 2 
Query:  599 DPTLFSFWLAANLPLDDDARQELLMLDSVVMRLRLEVKHLEQSRRRALCCAGCGSGIAWEGDVFTLPGAEGVVGAYVNPEGYVHQTVTVRDARNLVLRGPPEVEHSWFPGYAWTTAHCARCPGQGHLGWRFTAV 1000
            DP   S+W+  NLPLDD  R  LL +DS + RLR  +  +   +   LCC GCG  +A + DVF+L   EG +GAYVNP GYVH+T+TV  ++NL L G P  EHSWFPGYAWT A C RC    H+GW+FT+ 
Sbjct:  319 DPVELSYWVTQNLPLDDGLRINLLSIDSAIQRLRCALSII--GKCSVLCCKGCGCQVANKNDVFSLS-IEGPLGAYVNPGGYVHETMTVHKSQNLNLIGRPSTEHSWFPGYAWTIAQCRRC--SSHMGWKFTST 447
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BLAST of mRNA_S-dermatodea_contig12317.1461.1 vs. uniprot
Match: K1QI70_CRAGI (Protein cereblon n=2 Tax=Crassostrea gigas TaxID=29159 RepID=K1QI70_CRAGI)

HSP 1 Score: 141 bits (355), Expect = 6.250e-34
Identity = 74/144 (51.39%), Postives = 94/144 (65.28%), Query Frame = 2 
Query:  602 PTLFSFWLAANLPLDDDARQELLMLDSVVMRLRLEVKHLEQSRRRALCCAGCGSGIAWEGDVFTLPGAEGVVGAYVNPEGYVHQTVTVRDARNLVLRGPPEVEHSWFPGYAWTTAHCARCPGQGHLGWRFTAVNHGTRASLSPP 1033
            P   S+W+  NLPLDDD R  L+ +DS V RLR  +  +++    +LCC  C + IA + DVF+L   EG +GAYVNP+GYVH+T+TV  A+NL L G    EHSWFPGYAWT A C RC    H+GW+FTA    TR  L+PP
Sbjct:  297 PVELSYWVIQNLPLDDDLRLNLMGIDSAVQRLRCSLSIVQKCS--SLCCKECNTNIANKNDVFSLS-VEGPLGAYVNPQGYVHETMTVYKAQNLNLIGRATKEHSWFPGYAWTIAQCRRCAF--HIGWKFTA----TRKDLTPP 431
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BLAST of mRNA_S-dermatodea_contig12317.1461.1 vs. uniprot
Match: UPI00201F19B2 (protein cereblon-like n=2 Tax=Haliotis TaxID=6452 RepID=UPI00201F19B2)

HSP 1 Score: 140 bits (353), Expect = 1.380e-33
Identity = 70/135 (51.85%), Postives = 88/135 (65.19%), Query Frame = 2 
Query:  599 DPTLFSFWLAANLPLDDDARQELLMLDSVVMRLRLEVKHLEQSRRRALCCAGCGSGIAWEGDVFTLPGAEGVVGAYVNPEGYVHQTVTVRDARNLVLRGPPEVEHSWFPGYAWTTAHCARCPGQGHLGWRFTAVN 1003
            DPT  S+W+A NLPLDD  R  LL L+S V RLR E+  +++     LCC  CG+ I  + +VF++   EG +GAYVNP G+VH+T+TV   +NL L G P  EHSWFPGYAWT   C  C    H+GWRFTA N
Sbjct:  305 DPTELSYWVAQNLPLDDSMRLHLLGLNSAVQRLRCELSIIQKCT--VLCCKDCGTQITHKNEVFSMS-MEGPLGAYVNPGGHVHETLTVYKIQNLGLIGRPSTEHSWFPGYAWTIVECKHC--SSHMGWRFTASN 434
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BLAST of mRNA_S-dermatodea_contig12317.1461.1 vs. uniprot
Match: A7S6W7_NEMVE (Protein cereblon (Fragment) n=5 Tax=Nematostella vectensis TaxID=45351 RepID=A7S6W7_NEMVE)

HSP 1 Score: 139 bits (349), Expect = 1.780e-33
Identity = 71/152 (46.71%), Postives = 97/152 (63.82%), Query Frame = 2 
Query:  602 PTLFSFWLAANLPLDDDARQELLMLDSVVMRLRLEVKHLEQSRRRALCCAGCGSGIAWEGDVFTLPGAEGVVGAYVNPEGYVHQTVTVRDARNLVLRGPPEVEHSWFPGYAWTTAHCARCPGQGHLGWRFTAVNHG---------TRASLSP 1030
            PT FSFW+AANLPLDD  R ++L ++    RLR E+  +++     LCC  C S IA++ ++F++   +G +GAYVNP G+VH+T+T   A  + LRG P  E+SWFPGYAWT A C +C    HLGWRF+A+  G         TR+SL P
Sbjct:  246 PTEFSFWIAANLPLDDRLRLQILTINCPTQRLRKELSIMQKCS--VLCCRDCNSTIAYKNELFSMS-LDGPLGAYVNPGGFVHETLTFYKALGIRLRGHPTAENSWFPGYAWTIAECQQC--SNHLGWRFSAIKKGLSPGKFWGLTRSSLKP 392
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig12317.1461.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LLP2_ECTSI1.640e-12654.02Protein cereblon n=1 Tax=Ectocarpus siliculosus Ta... [more]
A0A6H5KP54_9PHAE2.610e-11759.25CULT domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A835YMI6_9STRA3.390e-4438.89Protein cereblon n=1 Tax=Tribonema minus TaxID=303... [more]
UPI0014581C3B4.720e-3553.73protein cereblon-like n=1 Tax=Pecten maximus TaxID... [more]
A0A6P8IV65_ACTTE1.460e-3449.67Protein cereblon n=2 Tax=Actinia tenebrosa TaxID=6... [more]
UPI001CF4E7212.750e-3451.43protein cereblon-like isoform X1 n=6 Tax=Acropora ... [more]
A0A210QI98_MIZYE4.640e-3451.49Protein cereblon n=1 Tax=Mizuhopecten yessoensis T... [more]
K1QI70_CRAGI6.250e-3451.39Protein cereblon n=2 Tax=Crassostrea gigas TaxID=2... [more]
UPI00201F19B21.380e-3351.85protein cereblon-like n=2 Tax=Haliotis TaxID=6452 ... [more]
A7S6W7_NEMVE1.780e-3346.71Protein cereblon (Fragment) n=5 Tax=Nematostella v... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig12317contigS-dermatodea_contig12317:1819..6747 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons6
Model size1221
Cds size645
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924243.5732596-CDS-S-dermatodea_contig12317:1818..19591622924243.5732596-CDS-S-dermatodea_contig12317:1818..1959Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12317 1819..1959 +
1694079119.9707022-CDS-S-dermatodea_contig12317:1818..19591694079119.9707022-CDS-S-dermatodea_contig12317:1818..1959Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12317 1819..1959 +
1622924243.5813797-CDS-S-dermatodea_contig12317:3048..34751622924243.5813797-CDS-S-dermatodea_contig12317:3048..3475Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12317 3049..3475 +
1694079119.9842308-CDS-S-dermatodea_contig12317:3048..34751694079119.9842308-CDS-S-dermatodea_contig12317:3048..3475Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12317 3049..3475 +
1622924243.5887475-CDS-S-dermatodea_contig12317:3676..37531622924243.5887475-CDS-S-dermatodea_contig12317:3676..3753Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12317 3677..3753 +
1694079119.9929855-CDS-S-dermatodea_contig12317:3676..37531694079119.9929855-CDS-S-dermatodea_contig12317:3676..3753Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12317 3677..3753 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924243.5966425-UTR-S-dermatodea_contig12317:3753..38071622924243.5966425-UTR-S-dermatodea_contig12317:3753..3807Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig12317 3754..3807 +
1694079120.0023568-UTR-S-dermatodea_contig12317:3753..38071694079120.0023568-UTR-S-dermatodea_contig12317:3753..3807Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig12317 3754..3807 +
1622924243.6068468-UTR-S-dermatodea_contig12317:4796..49501622924243.6068468-UTR-S-dermatodea_contig12317:4796..4950Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig12317 4797..4950 +
1694079120.0119674-UTR-S-dermatodea_contig12317:4796..49501694079120.0119674-UTR-S-dermatodea_contig12317:4796..4950Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig12317 4797..4950 +
1622924243.617619-UTR-S-dermatodea_contig12317:5650..57071622924243.617619-UTR-S-dermatodea_contig12317:5650..5707Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig12317 5651..5707 +
1694079120.0212975-UTR-S-dermatodea_contig12317:5650..57071694079120.0212975-UTR-S-dermatodea_contig12317:5650..5707Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig12317 5651..5707 +
1622924243.6274662-UTR-S-dermatodea_contig12317:6438..67471622924243.6274662-UTR-S-dermatodea_contig12317:6438..6747Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig12317 6439..6747 +
1694079120.0304651-UTR-S-dermatodea_contig12317:6438..67471694079120.0304651-UTR-S-dermatodea_contig12317:6438..6747Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig12317 6439..6747 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig12317.1461.1prot_S-dermatodea_contig12317.1461.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig12317 1819..3753 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig12317.1461.1

>prot_S-dermatodea_contig12317.1461.1 ID=prot_S-dermatodea_contig12317.1461.1|Name=mRNA_S-dermatodea_contig12317.1461.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=215bp
ENVACRHHGRDTLGPRRHGRRRRGGVGFGGHGPRETPISTRRGFGLETGR
PLLEGGHQPRPLPGAALRPSPPPFSRPLRQPPLGDGDATLRRGRQLSRRL
GGKGGLAPQRAKRASADRHRNVIARGGGGGASASAGGKGGGRTRRGRRRR
GAGCGFCCNRRRGCERGRGDGGRDQERERWWGATCPRRRRLDARAKGEAG
PHAVLVLVGGEPAA*
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mRNA from alignment at S-dermatodea_contig12317:1819..6747+

Legend: CDSpolypeptideUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig12317.1461.1 ID=mRNA_S-dermatodea_contig12317.1461.1|Name=mRNA_S-dermatodea_contig12317.1461.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=4929bp|location=Sequence derived from alignment at S-dermatodea_contig12317:1819..6747+ (Saccorhiza dermatodea SderLu1190fm monoicous)
GAGAACGTCGCCTGTCGGCACCACGGCCGAGATACGCTCGGGCCACGGCG
GCACGGTCGGCGAAGACGCGGAGGGGTTGGGTTTGGCGGTCATGGCCCGC
GGGAGACACCGATTTCGACTCGTCGAGGATTTGGGCTGGAGGTGCGTATA
GGGGCGCTTCGAGAGCGATTCCTGCTGCTCTGAACACAGGTTAATGACAC
ATTCCTCTACGTGGCAAGCAGGAGTCGACCGAGGGCTGGGGGGCCGAAGG
CATGACTGATAGATGGCGATAGCTGCGCTTGTCGTTGTTGGGGCGTTCCT
CGTAAGGCATATTCGAGCAACGCAACGCCCGCCATCGCCAGGAGAAAGGG
GGAGAGTAGGGGGAGGGGGGGGGGGTGGTAGAATGGTGCGCAATAATGCA
CCTGATGGCCACAGGAATCTTCGTTCATGAGAATCTTCGTTCATGAGCAG
CGCTTTCCGCGTTTATTTGTAGGGGTATGATATAGAGTAGGCTCCTCTTG
GGTATTTTTTTATGGGACGAATGGCGTAGGCATTTTGAAGCTTTTGGAAC
CCCCCCCCCCCCCCCCCTCACCCCCCTGCTTTTTTTCATGGGCCACATAA
TGCCATACAGTCACCACTTTTCCTACCAACGCACACCTCGCCGGCGTAGC
CTTGTGGCTACCTATTAATAGTATTCTATAGTCACGTCATACACCCATGA
GCGACCAAATGCCAGCATGCACAATTCGCGACGCCTTCCACACACTATAA
CACACCTCTGTGTCTCCACTTGCCTCTTACGCTTCCAACCATAACCCCCC
CCCCCCCCCCCCCCCCCCCCCCCCCCAACCCCCCGCCCCCCCCCCCCCCG
GAGGGAGGGCGGGTGGCTCAGACTGGGCATAACAGACACACAAATACCGG
CTTTGTAGGGATGCGAGGTCTATGGTCTAACGACTACGGCATGCACGATC
AATGAGTACACCCTCCCCCACTGAATGCGCATCGTTTAGTTGCCCGGTAC
GTCTAATCAATCCATGGCATATCGTTTGGTGTCGCAAACGCAAGGATGAT
GACCAGCAGCTGGTATCATCATTATCCTTGTGAAGAGCAGCCTCCCGGCC
GGCGAAAAACTGGCAGATCGACTCCGTCCCGGCGTTGTTGGGGCGCGCGG
TCTATGTCAGTTTGGATACGACATGCATTTAACATAAGTACCCCCCCCTC
CCCCTCCCGCCTGTCCGACACCACCACAAGACGGGGCGTCCGCTATTGGA
AGGTGGTCATCAGCCCCGACCTCTGCCCGGGGCCGCTCTGCGCCCCTCTC
CCCCGCCCTTTTCGCGCCCGCTGCGGCAGCCGCCACTGGGCGATGGCGAC
GCCACGCTTCGTCGTGGACGCCAACTCTCCAGGCGGCTTGGCGGCAAGGG
CGGCCTCGCTCCTCAGAGAGCAAAGAGAGCCTCTGCCGACAGGCACCGCA
ACGTCATCGCCCGAGGCGGAGGCGGCGGCGCCAGCGCCAGCGCCGGCGGG
AAGGGAGGGGGGAGAACCAGGCGGGGACGCCGGCGACGGGGCGCAGGTTG
TGGATTTTGTTGCAACCGGCGAAGAGGCTGTGAGCGTGGCAGAGGGGACG
GCGGCAGGGACCAGGAGCGGGAGCGGTGGTGGGGGGCCACTTGCCCACGC
CGAAGGAGTCGCAGCGGCGACGGGGGCGGCGGCGGCGGCAGAGGTAGAAA
CCGCGGTCGAGGAGGACGGGCACGAGTCAGGCGGGGTAGTTCCGCGAATG
ACGAGTGCGGCGAAAATACCGCCGAGGCGGGGGAGGGACGGGGCTGGCAA
GGGGCGCGGGGACGAGGAAGAGGGAGGGGGGGAGGGGGAGGAGGGGGTGA
AGGGGGAGGACTGGATGCCCGGGCGAAGGGAGAAGCTGGACCCCACGCTG
TTCTCGTTTTGGTTGGCGGCGAACCTGCCGCTTGATGACGACGCGCGGCA
GGAGCTTCTCATGCTCGATTCCGTCGTGATGCGTCTCCGGTGAGACACGC
AGGGGGGGGACGCAGGCACACGCGCGCTCGCGACGATTTGTTTTGTTTTT
GTTTTGTTTTGTTTTTTACGTTTTTTTTTGTTTCTTGTTTCTTGTTTCCG
GATCCGCTTTGACGGGCGCGCGTGGCGCTGATGCTCTCGTGATTTCCAGA
AAACGGTATTGTGTGTGACACCTTTCGTGTGTAGTATCATATCATACACG
CTTTGAAGAGCGCGATATTTATATTCAAGTCAAACGATTCCACGCGCGAA
AACAGTTTTTTATTATATTTTTTTGCGGCTGCCTCTCTTCCCCGGTTGAA
ACCAGGATATTGCTCCAACAAGACAAAGGCACTTGTACCATATCCATATA
AGATCATACATGACATGAAACCATAGCATCATCACCCATACGTGACAAGT
GAGCAGACCCCACAAAGGTACTTGTAGAGACCTTGGACCATCCTATATTT
TTGCCAAAGGTGGGACCCCAACTCTGCTCGCTCTGCACATGTCTTCCAAT
TCATTTTATTTTGTTTTTGGTGGGGGGAGATGGTCATACGGCTAACTAAC
TCTACCGAGATTCATTAACGTTGGGTATGATACTACTATGGGATCGTTGT
GGAAACGACTACTTGTGCTACCCCCCCCCCCTCCCCCCCACCCCCAGTGC
CGTCGTGTATATTGTGTGCTTGCGATGCTTGTGCATGCGCACGGTGATCA
AAGTCCCGTTGCGGTACGTGGAGTATAGTCACGCCTACTGAACGTGCAAC
ATTTGGTCGCCCGGTATGTCCAATCAACCCATGGCATATCGTTTGGCGTC
GCAAACGCATGGATGATGGCTAGCAGGTGGTGTCATCCTATTAATTGTGA
AACGCAGCCGGCGAAAGCCAACCCGGCGTATCGCTCAGTCCCGGCATTGT
TGGGACGCGTGGTCTATGTCCGTCTGGATACGACATGCGATTAACACAAC
TACACCCCCCCAACCCCTGCCCCTAAAGACTGGAGGTAAAGCACTTGGAG
CAGTCAAGACGAAGGGCACTGTGCTGCGCGGGGTGCGGTTCGGGCATTGC
GTGGGAGGGAGACGTGTTTACTCTTCCCGGGGCGGAGGGAGTGGTCGGCG
CCTACGTCAACCCCGAGGGCTATGTTCACCAGGTGGGGTTTCGGTTATTG
TTCTGCTTCCTTGCGTCGGAGGCGCGCGAGCGTTTCGGATTTGATTTTGG
GGTTTTACACGTGTGCTTTGGCTTTTCCGGGAAAGGGTCCACGATTTAAG
ATTCCAACGGTTGTTTAACCGAAATCCGGACCGCCGGCCAGCGCGAAATC
ATTTGCGGAAAATCTCGACTACTTCGTTGATTGCCGCTGTCTTTGTCGCA
GATGCTGATGCTGATGCTGCTGCCGCTGCTGCTGCTGCTGCTGCTATGCG
TGTGTGTGTGTGTGTGTGTGTGTGGTTTTTAGCTGGTCGTATAAAGAAAA
CTACCCACAGCCGATTGGGATACCCACCGAAGAGTGAGGACGATGGTGCT
CGTGTTAATTGGCAAAGCGTCAAATCGTGGCACTGAATATAGCTCGTCAA
GGTTTAGCGCCAGCTCGCACTTTGTAGAGGTAAAAAGTCGTCCGCCTTTT
GTTTTTTGTCCTTACATAAGCAGTAGCCTATACAAGCATAATACAACGAA
GTATCATACAACGGGCAGGCCCGTTAGGCTCTCTCCGCCAAACAATCGCC
CGGAGCTTGAATGCGCGCTGACTCGTCTCGGTACCGTACGCCTCCCCTTT
TCTCCCCACCCCCCCGCCCGCCCCCCACACCCATCTGTGCGAACAAAACG
TCGGGGGGGGGGGGGGGGGGTTCTCGCCGCAGACCGTCACCGTACGCGAC
GCCCGCAATCTTGTTCTCAGGGGTCCACCGGAAGTTGAGGTGAGCGGCTG
TTTTTGCGCTTTTTTTCGGTTGTGCACCTGCGCTCGATCGATCGCTCGGC
TACCCATACGCACGGTGAGGAAACCCTCCACAGCAGTATATTCCATACCT
TACGTTTGTTTGTTGTTCTATACATAGGGCAGGAGCAGCAGCAGCAGCGG
GGAAAGGGTGGGTGGCTTCGGTTTGGTAAAAAAAGGTGCGGCAGGGTGCG
AGTATGTTTATGTGTATGTGTGTTTGTATTTTGCTGCGCCCTCTTTGTGT
TTTGGGAGGGTTTTGCAGATAGCAGAGAGAGCATGCACCACGTTTTTTTT
TTTTTTTTTTGTGGTATTGCAAAGCGCTTGCTCCTTGTTCCTGGAAGGCG
AAGGTGGCGGAATCATTGTTCCGATCTCGAGAGTTGCGTTTGTAAGCGCG
CGGGCGGTGGCGGCAATCGATGCGCGCGTCCGCCCTGGCGAGCAGCACGC
CATTCACACGCGCGGAGGGGTAATATGACGAGTCCGTGCTGCCGCGTAAC
GCGCGCCTAGGCGGCAAGCTTCTCCCTGCGACCGCAAAAACAGTTTTAGT
CTCGGCGGTACGATGTGCACCGGCCCACTGCCCTACGTTCTCACTCTCAA
GTCTCGAGACATGTGTTACTTCATCGTTTACCTGTTTCGGTGTTTGTTAC
CAGCCCGACCCCCCCCTCCCACCCCCCCCCCCTCGCCCGTCCCCAACGTC
GCACGGTTCTTGACCGAAAGCACTCGTGGTTTCCCGGCTACGCGTGGACA
ACGGCGCACTGCGCGCGTTGTCCAGGTCAAGGTCACCTTGGGTGGCGGTT
CACGGCGGTGAATCACGGAACACGCGCCTCTCTGTCGCCGCCCCCCGCGC
CCTCGTCCGCCCCCGCCCCCGCTGGAGGAGTTTTTTCGCCTTCGCGATCT
CGGGGCGGCGGCGGCGGCGGCGGCGGTGGCGCTACAGGTAGAATGGGCGG
GGGGCTCATTCGTGCTGACAGCGACCTGGGCCCGGTGGCGTTTTACGGGC
TGCGCAGGCCCTCCCTGGTGCATGAGCGC
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Coding sequence (CDS) from alignment at S-dermatodea_contig12317:1819..6747+

>mRNA_S-dermatodea_contig12317.1461.1 ID=mRNA_S-dermatodea_contig12317.1461.1|Name=mRNA_S-dermatodea_contig12317.1461.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1290bp|location=Sequence derived from alignment at S-dermatodea_contig12317:1819..6747+ (Saccorhiza dermatodea SderLu1190fm monoicous)
GAGAACGTCGCCTGTCGGCACCACGGCCGAGATACGCTCGGGCCACGGCG
GCACGGTCGGCGAAGACGCGGAGGGGTTGGGTTTGGCGGTCATGGCCCGC
GGGAGACACCGATTTCGACTCGTCGAGGATTTGGGCTGGAGGAGAACGTC
GCCTGTCGGCACCACGGCCGAGATACGCTCGGGCCACGGCGGCACGGTCG
GCGAAGACGCGGAGGGGTTGGGTTTGGCGGTCATGGCCCGCGGGAGACAC
CGATTTCGACTCGTCGAGGATTTGGGCTGGAGACGGGGCGTCCGCTATTG
GAAGGTGGTCATCAGCCCCGACCTCTGCCCGGGGCCGCTCTGCGCCCCTC
TCCCCCGCCCTTTTCGCGCCCGCTGCGGCAGCCGCCACTGGGCGATGGCG
ACGCCACGCTTCGTCGTGGACGCCAACTCTCCAGGCGGCTTGGCGGCAAG
GGCGGCCTCGCTCCTCAGAGAGCAAAGAGAGCCTCTGCCGACAGGCACCG
CAACGTCATCGCCCGAGGCGGAGGCGGCGGCGCCAGCGCCAGCGCCGGCG
GGAAGGGAGGGGGGAGAACCAGGCGGGGACGCCGGCGACGGGGCGCAGGT
TGTGGATTTTGTTGCAACCGGCGAAGAGGCTGTGAGCGTGGCAGAGGGGA
CGGCGGCAGGGACCAGGAGCGGGAGCGGTGGTGGGGGGCCACTTGCCCAC
GCCGAAGGAACGGGGCGTCCGCTATTGGAAGGTGGTCATCAGCCCCGACC
TCTGCCCGGGGCCGCTCTGCGCCCCTCTCCCCCGCCCTTTTCGCGCCCGC
TGCGGCAGCCGCCACTGGGCGATGGCGACGCCACGCTTCGTCGTGGACGC
CAACTCTCCAGGCGGCTTGGCGGCAAGGGCGGCCTCGCTCCTCAGAGAGC
AAAGAGAGCCTCTGCCGACAGGCACCGCAACGTCATCGCCCGAGGCGGAG
GCGGCGGCGCCAGCGCCAGCGCCGGCGGGAAGGGAGGGGGGAGAACCAGG
CGGGGACGCCGGCGACGGGGCGCAGGTTGTGGATTTTGTTGCAACCGGCG
AAGAGGCTGTGAGCGTGGCAGAGGGGACGGCGGCAGGGACCAGGAGCGGG
AGCGGTGGTGGGGGGCCACTTGCCCACGCCGAAGGAGACTGGATGCCCGG
GCGAAGGGAGAAGCTGGACCCCACGCTGTTCTCGTTTTGGTTGGCGGCGA
ACCTGCCGCTTGAGACTGGATGCCCGGGCGAAGGGAGAAGCTGGACCCCA
CGCTGTTCTCGTTTTGGTTGGCGGCGAACCTGCCGCTTGA
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