prot_S-dermatodea_contig123.1443.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig123.1443.1
Unique Nameprot_S-dermatodea_contig123.1443.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length511
Homology
BLAST of mRNA_S-dermatodea_contig123.1443.1 vs. uniprot
Match: D7FRA1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRA1_ECTSI)

HSP 1 Score: 223 bits (569), Expect = 9.590e-60
Identity = 187/471 (39.70%), Postives = 231/471 (49.04%), Query Frame = 0
Query:   30 ELTDVAELSHREPDASVTPPRSNALTEDGSVFSLAEGVAGFGDAGFPSPGTTLGLKSSAQQNRNYHRPRKWPAKIMRQNGPFPRSPGSAGGPSPPLDTPRLRLGASTPASPADAAGPASTSPPMSDFGMELAQPSTSGALTGSAAALHGVGS--RSSSFGAGSGKGLFMQEEPLLGDAALAAQLGPGDIGKNLGSSGEYP-ALESADTGFVPGARSRSGTDIWRNSLQSCASCAADELAEDSSGDSGESSVGHLSRHNAAVATGDGNRELASVWALMADAADKDVFAGKDHPGKESV-GVRAQAVWKSTGPRLIEIIFRHFETIGDPQMLASMACVLGSASGPDACVGIVPKGEDSMATYDRYMTSYAEQLYQWGALGARTEIVNHQTETIQQPRDLQINGRPSSSEHAAPPPVCERGGHKRQGRMDCSLCGTPVRGEHLACGFCGHGGHALHMESWYAQETECAWLGCRC 496
            EL  VAEL    P  +VTPPR  A+   G            G++G  SPG T+   SSA  +R   R  K      RQ+  F RSP S    S   D   LRLG   P SPAD  GPASTSPPMSDFGM+L Q S S          HG  +  RS SF AG+   L   E   +GD  LAAQLG    G +  SS + P A  +A  G  P +         R    SC + A ++  E         +VG L RHN  VA      ELASVWAL+A+AA +   A +++ G  S+   R    W+++   L   I  H E+  DPQ LAS+A V+GS S    C G +P+G D  A+ DRY+ SYAE+  QWGA G R E V+HQTE    P         S  +H     V  R  H     + CS+CGT VRG  L C  CGHGGH+ H+  W+  E EC    CRC
Sbjct:  840 ELEHVAELPLDGPSVNVTPPR--AIPGAG------------GESGVLSPGATM-KPSSAHGHRTRQRLGK-----RRQHQQFARSPAS----SVDFDALYLRLGTLAPTSPADTVGPASTSPPMSDFGMDLGQSSAS----------HGQATVNRSRSFSAGTS--LLFGER--VGDGQLAAQLGLSGRGHH--SSTDSPTAFHAAGVGVRPRS--------LRGDPSSCMAIAEEDKVE-------IPTVGQLCRHNVRVAAARNCAELASVWALLAEAAARGESARRENSGLGSLLDARRLPRWETSSSLLTSRILTHHESCADPQTLASVASVVGSGSRDGGCAGGLPQGGDHTASCDRYIESYAERCCQWGAEGERAETVSHQTEPCDHPA--------SGVQH-----VGARHPHDTANPV-CSVCGTLVRGRPLLCPRCGHGGHSKHIAEWFELERECPACDCRC 1241          
BLAST of mRNA_S-dermatodea_contig123.1443.1 vs. uniprot
Match: UPI000C75702A (GATOR complex protein WDR59-like n=1 Tax=Eurytemora affinis TaxID=88015 RepID=UPI000C75702A)

HSP 1 Score: 68.2 bits (165), Expect = 2.560e-8
Identity = 42/128 (32.81%), Postives = 59/128 (46.09%), Query Frame = 0
Query:  383 ATYDRYMTSYAEQLYQWGALGARTEIVNHQTETIQQPRDLQINGRPSSSEHAAPPPVCERGGHKRQG---------RMDCSLCGTPVRGEHLACGFCGHGGHALHMESWYAQETECAWLGCRCHCVVK 501
            +TYD  + SYA+ LY+W     R E++   +E            +  SS  ++   +C   G   +G           +CS+C +P RG    C  CGHGGHALH+  W+AQ   C   GC C C  K
Sbjct:  873 STYDGLIESYADLLYRWKMFQQRAELMKQISEL-----------KHVSSYTSSITLICPTCGKILRGPWCISCRTLSFNCSVCRSPCRGLVSLCQQCGHGGHALHLSQWFAQNISCP-SGCGCKCPKK 988          
BLAST of mRNA_S-dermatodea_contig123.1443.1 vs. uniprot
Match: UPI001D084DE5 (GATOR complex protein WDR59 isoform X1 n=2 Tax=Chrysoperla carnea TaxID=189513 RepID=UPI001D084DE5)

HSP 1 Score: 65.9 bits (159), Expect = 1.330e-7
Identity = 37/121 (30.58%), Postives = 56/121 (46.28%), Query Frame = 0
Query:  379 EDSMATYDRYMTSYAEQLYQWGALGARTEIVNHQTETIQQPRDLQINGRPSSSEHAAPPPVCERGGHKRQGRMDCSLCGTPVRGEHLACGFCGHGGHALHMESWYAQETECAWLGCRCHCV 499
            + + A YD Y   YAE LY+W  L AR++++   + T +  R ++        +  +  P C +    R+    C +C   VRG    C  CGHGGH  H+  W+     C   GC C C+
Sbjct:  815 DKNTALYDSYKKFYAEILYRWNLLYARSQVLKFLSTTPESHRGVEFLTDCHYCDRPSRGPNCNK---CRKMSFSCIVCHISVRGSSNFCLICGHGGHTKHLLEWFRIYDVCP-TGCGCKCL 931          
BLAST of mRNA_S-dermatodea_contig123.1443.1 vs. uniprot
Match: T1FS87_HELRO (RWD domain-containing protein n=1 Tax=Helobdella robusta TaxID=6412 RepID=T1FS87_HELRO)

HSP 1 Score: 62.0 bits (149), Expect = 2.130e-6
Identity = 35/114 (30.70%), Postives = 55/114 (48.25%), Query Frame = 0
Query:  385 YDRYMTSYAEQLYQWGALGARTEIVNHQTETIQQPRDLQINGRPSSSEHAAPPPVCERGGHKRQGRMDCSLCGTPVRGEHLACGFCGHGGHALHMESWYAQETECAWLGCRCHC 498
            Y  ++  YA  L++WG +  R+E+++                 PSS +      V    G++R  +  C+LC  PV G  + C  CGHGGH +H+ SW+++   C   GC C C
Sbjct:  852 YSNFIHCYANTLFRWGFVNQRSELLDF---------------LPSSEKELQKSCV----GYRRNVKK-CALCELPVHGLLIFCFECGHGGHVIHLSSWFSKHDMCP-TGCGCIC 944          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig123.1443.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FRA1_ECTSI9.590e-6039.70Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
UPI000C75702A2.560e-832.81GATOR complex protein WDR59-like n=1 Tax=Eurytemor... [more]
UPI001D084DE51.330e-730.58GATOR complex protein WDR59 isoform X1 n=2 Tax=Chr... [more]
T1FS87_HELRO2.130e-630.70RWD domain-containing protein n=1 Tax=Helobdella r... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF17120Zn_ribbon_17coord: 449..501
e-value: 8.8E-7
score: 28.5
NoneNo IPR availablePANTHERPTHR46170FAMILY NOT NAMEDcoord: 275..366
coord: 382..498

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig123contigS-dermatodea_contig123:8327..12556 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig123.1443.1mRNA_S-dermatodea_contig123.1443.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig123 8143..13677 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig123.1443.1 ID=prot_S-dermatodea_contig123.1443.1|Name=mRNA_S-dermatodea_contig123.1443.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=511bp
MRTTNRPISRGSSVDEMVFGSPYQHYLLPELTDVAELSHREPDASVTPPR
SNALTEDGSVFSLAEGVAGFGDAGFPSPGTTLGLKSSAQQNRNYHRPRKW
PAKIMRQNGPFPRSPGSAGGPSPPLDTPRLRLGASTPASPADAAGPASTS
PPMSDFGMELAQPSTSGALTGSAAALHGVGSRSSSFGAGSGKGLFMQEEP
LLGDAALAAQLGPGDIGKNLGSSGEYPALESADTGFVPGARSRSGTDIWR
NSLQSCASCAADELAEDSSGDSGESSVGHLSRHNAAVATGDGNRELASVW
ALMADAADKDVFAGKDHPGKESVGVRAQAVWKSTGPRLIEIIFRHFETIG
DPQMLASMACVLGSASGPDACVGIVPKGEDSMATYDRYMTSYAEQLYQWG
ALGARTEIVNHQTETIQQPRDLQINGRPSSSEHAAPPPVCERGGHKRQGR
MDCSLCGTPVRGEHLACGFCGHGGHALHMESWYAQETECAWLGCRCHCVV
KLVKAWEDAR*
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