prot_S-dermatodea_contig123.1440.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig123.1440.1
Unique Nameprot_S-dermatodea_contig123.1440.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length124
Homology
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BLAST of mRNA_S-dermatodea_contig123.1440.1 vs. uniprot
Match: D7FRA1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRA1_ECTSI)

HSP 1 Score: 107 bits (266), Expect = 1.890e-24
Identity = 64/124 (51.61%), Postives = 84/124 (67.74%), Query Frame = 0 
Query:    1 LRLHDIEEPSHGGSGVDLPAGESSAGRGYGSTAGSESLEGATTSKTSMIRDDLVPVVWSFSKLASAASSKIAGDMVNTAGHNPTRELIEVERGAIRGVFGPVSDVRLHMARNSVTLVIIASAEA 124
            LRLH++E+      G DLPAG+SS GR YGSTAGSESLE + TSK  +IR +++PVVWS S+  +AA  K+A   + T    P REL++VE  A RG FG V  V L +AR  ++LV+ A+AEA
Sbjct:  233 LRLHNVEKLDFESPGKDLPAGDSSGGRDYGSTAGSESLETSATSKAPVIRKEILPVVWSLSEPQNAAPFKMA---IETTSDIPVRELVQVENIARRGGFGSVRGVDLQVARKCISLVMAATAEA 353
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BLAST of mRNA_S-dermatodea_contig123.1440.1 vs. uniprot
Match: A0A6H5JSJ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSJ8_9PHAE)

HSP 1 Score: 104 bits (260), Expect = 1.130e-23
Identity = 62/124 (50.00%), Postives = 83/124 (66.94%), Query Frame = 0 
Query:    1 LRLHDIEEPSHGGSGVDLPAGESSAGRGYGSTAGSESLEGATTSKTSMIRDDLVPVVWSFSKLASAASSKIAGDMVNTAGHNPTRELIEVERGAIRGVFGPVSDVRLHMARNSVTLVIIASAEA 124
            LRLH++E+      G DLPAG+SS GR YGST GSESLE + TSK  ++R +++PVVWS S+  +AA  K+A   + T    P REL++VE  A RG FG V  V L +AR  ++LV+ A+AEA
Sbjct:  352 LRLHNVEKLDFESPGKDLPAGDSSGGRDYGSTLGSESLETSATSKAPVLRKEILPVVWSLSEPQNAAPFKMA---IETTSDIPVRELVQVENIARRGGFGSVRSVDLQVARKCISLVMAATAEA 472
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig123.1440.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FRA1_ECTSI1.890e-2451.61Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JSJ8_9PHAE1.130e-2350.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig123contigS-dermatodea_contig123:1627..2967 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig123.1440.1mRNA_S-dermatodea_contig123.1440.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig123 1627..2967 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig123.1440.1 ID=prot_S-dermatodea_contig123.1440.1|Name=mRNA_S-dermatodea_contig123.1440.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=124bp
LRLHDIEEPSHGGSGVDLPAGESSAGRGYGSTAGSESLEGATTSKTSMIR
DDLVPVVWSFSKLASAASSKIAGDMVNTAGHNPTRELIEVERGAIRGVFG
PVSDVRLHMARNSVTLVIIASAEA
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