prot_S-dermatodea_contig10196.144.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig10196.144.1
Unique Nameprot_S-dermatodea_contig10196.144.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length141
Homology
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BLAST of mRNA_S-dermatodea_contig10196.144.1 vs. uniprot
Match: A0A6H5K882_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K882_9PHAE)

HSP 1 Score: 100 bits (249), Expect = 7.020e-22
Identity = 58/141 (41.13%), Postives = 83/141 (58.87%), Query Frame = 0 
Query:    1 VTNNADAVVVRVALDSREPYLLERRSGYHVVPLQYPPARVLLYIEVSHRAGLHLPGLLPGVVVCAPVTRTVAVVGKSKRHFNIRRVQLPLTPGRISPVYRVQSETLEKLLADLRRPIDGDLDSAAVYVALSRARSLDTLFL 141
            V +N D +V  + LD RE  +     GY VV L++ P RV ++IE    +GL LPG   GVV   P+ R V + GK+ R+F I+R QLPLT G +S V         +++ DLR+P    +D A++YVA SRA+SL+  +L
Sbjct: 1344 VCSNRDGIVRAIELDQREQ-IQNHDGGYRVVHLKHLPVRVFVHIESMDDSGLKLPGFPRGVVAFGPIERNVVLTGKNGRNFTIKRRQLPLTSGCLSSV---------RVILDLRKPPGPRVDPASLYVARSRAKSLNDTYL 1474
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10196.144.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K882_9PHAE7.020e-2241.13ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig10196contigS-dermatodea_contig10196:6866..7703 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig10196.144.1mRNA_S-dermatodea_contig10196.144.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig10196 6866..7703 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig10196.144.1 ID=prot_S-dermatodea_contig10196.144.1|Name=mRNA_S-dermatodea_contig10196.144.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=141bp
VTNNADAVVVRVALDSREPYLLERRSGYHVVPLQYPPARVLLYIEVSHRA
GLHLPGLLPGVVVCAPVTRTVAVVGKSKRHFNIRRVQLPLTPGRISPVYR
VQSETLEKLLADLRRPIDGDLDSAAVYVALSRARSLDTLFL
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