prot_S-dermatodea_contig12233.1399.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig12233.1399.1
Unique Nameprot_S-dermatodea_contig12233.1399.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length339
Homology
BLAST of mRNA_S-dermatodea_contig12233.1399.1 vs. uniprot
Match: A0A6H5JK27_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK27_9PHAE)

HSP 1 Score: 143 bits (361), Expect = 3.230e-34
Identity = 99/283 (34.98%), Postives = 144/283 (50.88%), Query Frame = 0
Query:    1 MTEKVYLVECRAQSYQVSVVVDCQPSGSKFDAP---LELDFRVGEPLDEEDEDSDPVGNRGTDLDDKQRQEYMSGLRDTYK--VLLRDESGDAWDVLGEEKTTVLYEHGMFFIRASIDHFSQGCLAKTIQPESAYHEETATWPFRPGKRELEFVNTTDRPLIFLVLPTSWSNKATHAVAMGLAWEGLEA-HVAISRAIEQSILAEATHPQVLQVPCTKRKGDPRAGQICPYATCRLAKSTGTEARVALITADSKTVAVWDYRIVRHKTRLAILPGQFSEGMIP 277
            +T+K ++VE     + +S ++DCQPSG+ F  P   L LDF  GE      ED D  G   TD D +  +E ++ LR TYK  V  R E G  W++  +       +   +F+R  I HFS  CL   +   S+  +       R  KR+LEFVN TD+ ++F VLPT +S  AT ++  G+   G+    V + R  E  I++ AT P    VP  K+ G P+AG +CP  T  + K    EARV + T+D +    W   +   +T+L +LP  FS G  P
Sbjct:  821 VTDKRHIVERGDGLFLLSTMIDCQPSGTIFQDPQNPLVLDFVFGE------EDEDSQGTDDTDEDTEDGKEDLAILRATYKARVFWRMEEGQPWELHEDGAWDFDDQLKKYFLRVKIRHFSDVCLGTELSLHSSC-DSCVVSRGRTKKRQLEFVNATDKKIVFKVLPTGYSTSATKSINAGVEVPGIVGVTVGLDRESETVIMSAATAPSTFSVPFKKKAGTPKAGDVCPAHTYNIPKKMRGEARVYMYTSDRQEP--WLNEVHPERTQLVVLPPMFSGGPTP 1094          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig12233.1399.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JK27_9PHAE3.230e-3434.98Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig12233contigS-dermatodea_contig12233:5264..6848 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig12233.1399.1mRNA_S-dermatodea_contig12233.1399.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig12233 4970..7244 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig12233.1399.1 ID=prot_S-dermatodea_contig12233.1399.1|Name=mRNA_S-dermatodea_contig12233.1399.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=339bp
MTEKVYLVECRAQSYQVSVVVDCQPSGSKFDAPLELDFRVGEPLDEEDED
SDPVGNRGTDLDDKQRQEYMSGLRDTYKVLLRDESGDAWDVLGEEKTTVL
YEHGMFFIRASIDHFSQGCLAKTIQPESAYHEETATWPFRPGKRELEFVN
TTDRPLIFLVLPTSWSNKATHAVAMGLAWEGLEAHVAISRAIEQSILAEA
THPQVLQVPCTKRKGDPRAGQICPYATCRLAKSTGTEARVALITADSKTV
AVWDYRIVRHKTRLAILPGQFSEGMIPILGEHKRDELAKGPLCLMDVALM
ATVKGLRLSNTQAPVSTISSGTSNAEAGGRLTTAVDNS*
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