prot_S-dermatodea_contig12232.1397.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig12232.1397.1
Unique Nameprot_S-dermatodea_contig12232.1397.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length70
Homology
BLAST of mRNA_S-dermatodea_contig12232.1397.1 vs. uniprot
Match: A0A6H5K090_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K090_9PHAE)

HSP 1 Score: 96.7 bits (239), Expect = 6.900e-22
Identity = 48/68 (70.59%), Postives = 56/68 (82.35%), Query Frame = 0
Query:    2 RAIDVYARVDEDLQVKTEAGAFVTIGFWALMVVLVVGEIQAFLRTPPPIERVVVDSTMGHRLRINADV 69
            + +DVYARVDEDLQV+TE GA VTIGFW LMVVL VGE+QA+ +   P ERVVVDSTMG +LRIN D+
Sbjct:   45 KQLDVYARVDEDLQVRTETGAAVTIGFWVLMVVLCVGEVQAYRKVQAPTERVVVDSTMGQKLRINIDM 112          
BLAST of mRNA_S-dermatodea_contig12232.1397.1 vs. uniprot
Match: A0A836CGD9_9STRA (Endoplasmic reticulum vesicle transporter-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGD9_9STRA)

HSP 1 Score: 63.5 bits (153), Expect = 4.130e-10
Identity = 33/69 (47.83%), Postives = 50/69 (72.46%), Query Frame = 0
Query:    2 RAIDVYARVDEDLQVKTEAGAFVTIGFWALMVVLVVGEIQAFLRTPPPIERVV-VDSTMGHRLRINADV 69
            R +D+YARV+EDL VKTE+GA VT+ FW L+V+LV  E++ FL T    E ++ VD+++G +L I  ++
Sbjct:   42 RRMDLYARVNEDLTVKTESGATVTVVFWVLLVLLVTSEVRTFLATRTSREELMRVDTSLGRKLEIGLNM 110          
BLAST of mRNA_S-dermatodea_contig12232.1397.1 vs. uniprot
Match: A0A821M1D3_9NEOP (Hypothetical protein n=1 Tax=Pieris macdunnoughi TaxID=345717 RepID=A0A821M1D3_9NEOP)

HSP 1 Score: 55.5 bits (132), Expect = 5.000e-8
Identity = 26/70 (37.14%), Postives = 48/70 (68.57%), Query Frame = 0
Query:    1 WRAIDVYARVDEDLQVKTEAGAFVTIGFWALMVVLVVGEIQAFLRTPPPIERVVVDSTMGHRLRINADVV 70
            ++  D YA+  ED +VKT +GAF+TI    +M++L++ E+  ++ +P   E + VD++ GH++RIN D++
Sbjct:    9 FKQFDAYAKTLEDFRVKTASGAFITILGGTVMILLIISELHTYM-SPNISEELFVDTSRGHKIRINFDII 77          
BLAST of mRNA_S-dermatodea_contig12232.1397.1 vs. uniprot
Match: A0A8B8HSZ8_9NEOP (endoplasmic reticulum-Golgi intermediate compartment protein 3 isoform X2 n=1 Tax=Vanessa tameamea TaxID=334116 RepID=A0A8B8HSZ8_9NEOP)

HSP 1 Score: 56.6 bits (135), Expect = 1.060e-7
Identity = 29/70 (41.43%), Postives = 47/70 (67.14%), Query Frame = 0
Query:    1 WRAIDVYARVDEDLQVKTEAGAFVTIGFWALMVVLVVGEIQAFLRTPPPIERVVVDSTMGHRLRINADVV 70
            ++  D YA+  ED +VKT  GAF+TI    +MV+L++ E+  +L +P   E + VD++ GH+LRIN D++
Sbjct:    9 FKQFDAYAKTLEDFRVKTATGAFITITGAVIMVLLILSEMHTYL-SPNISEELFVDTSRGHKLRINFDII 77          
BLAST of mRNA_S-dermatodea_contig12232.1397.1 vs. uniprot
Match: A0A8B8HSE8_9NEOP (endoplasmic reticulum-Golgi intermediate compartment protein 3 isoform X1 n=4 Tax=Nymphalinae TaxID=40040 RepID=A0A8B8HSE8_9NEOP)

HSP 1 Score: 56.6 bits (135), Expect = 1.130e-7
Identity = 29/70 (41.43%), Postives = 47/70 (67.14%), Query Frame = 0
Query:    1 WRAIDVYARVDEDLQVKTEAGAFVTIGFWALMVVLVVGEIQAFLRTPPPIERVVVDSTMGHRLRINADVV 70
            ++  D YA+  ED +VKT  GAF+TI    +MV+L++ E+  +L +P   E + VD++ GH+LRIN D++
Sbjct:    9 FKQFDAYAKTLEDFRVKTATGAFITITGAVIMVLLILSEMHTYL-SPNISEELFVDTSRGHKLRINFDII 77          
BLAST of mRNA_S-dermatodea_contig12232.1397.1 vs. uniprot
Match: UPI001E6622DA (endoplasmic reticulum-Golgi intermediate compartment protein 3 n=3 Tax=Pieris TaxID=7115 RepID=UPI001E6622DA)

HSP 1 Score: 55.5 bits (132), Expect = 2.890e-7
Identity = 26/70 (37.14%), Postives = 48/70 (68.57%), Query Frame = 0
Query:    1 WRAIDVYARVDEDLQVKTEAGAFVTIGFWALMVVLVVGEIQAFLRTPPPIERVVVDSTMGHRLRINADVV 70
            ++  D YA+  ED +VKT +GAF+TI    +M++L++ E+  ++ +P   E + VD++ GH++RIN D++
Sbjct:    9 FKQFDAYAKTLEDFRVKTASGAFITILGGTVMILLIISELHTYM-SPNISEELFVDTSRGHKIRINFDII 77          
BLAST of mRNA_S-dermatodea_contig12232.1397.1 vs. uniprot
Match: A0A6J1PBG8_BICAN (endoplasmic reticulum-Golgi intermediate compartment protein 3 n=5 Tax=Satyrini TaxID=127320 RepID=A0A6J1PBG8_BICAN)

HSP 1 Score: 55.1 bits (131), Expect = 3.950e-7
Identity = 26/70 (37.14%), Postives = 47/70 (67.14%), Query Frame = 0
Query:    1 WRAIDVYARVDEDLQVKTEAGAFVTIGFWALMVVLVVGEIQAFLRTPPPIERVVVDSTMGHRLRINADVV 70
            ++ +D YA+  ED +VKT  GA +T+    +MV+L++ E+  ++ +P   E + VD++ GH+LRIN D++
Sbjct:    9 FKQLDAYAKTLEDFRVKTATGAIITVSGAVIMVLLILSELHTYM-SPNISEELFVDTSRGHKLRINFDII 77          
BLAST of mRNA_S-dermatodea_contig12232.1397.1 vs. uniprot
Match: A0A7S2Y179_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y179_9STRA)

HSP 1 Score: 53.1 bits (126), Expect = 5.370e-7
Identity = 26/66 (39.39%), Postives = 45/66 (68.18%), Query Frame = 0
Query:    4 IDVYARVDEDLQVKTEAGAFVTIGFWALMVVLVVGEIQAFLRTPPPIERVVVDSTMGHRLRINADV 69
            +DVY++V++D ++KT  G  V++  W L+VVLVV E   +++     E +VVD T+G +LRI+ ++
Sbjct:   31 LDVYSKVEDDFKIKTSQGGTVSVMVWVLVVVLVVTETLQYMKREQR-EHMVVDQTLGQKLRIDLNI 95          
BLAST of mRNA_S-dermatodea_contig12232.1397.1 vs. uniprot
Match: A0A182FV96_ANOAL (U4/U6 small nuclear ribonucleoprotein Prp31 n=1 Tax=Anopheles albimanus TaxID=7167 RepID=A0A182FV96_ANOAL)

HSP 1 Score: 54.7 bits (130), Expect = 5.610e-7
Identity = 28/67 (41.79%), Postives = 46/67 (68.66%), Query Frame = 0
Query:    2 RAIDVYARVDEDLQVKTEAGAFVTIGFWALMVVLVVGEIQAFLRTPPPIERVVVDSTMGHRLRINAD 68
            R +D Y ++D +  ++T +GA +T+    ++VVLV+GEI A+L +P   E + VD+T GH+L+IN D
Sbjct:    8 RRLDAYPKIDNEFSIRTVSGAALTLVSSIVIVVLVIGEINAYL-SPNISEELFVDTTRGHKLQINLD 73          
BLAST of mRNA_S-dermatodea_contig12232.1397.1 vs. uniprot
Match: A0A8J9YHC1_9NEOP ((lesser marbled fritillary) hypothetical protein (Fragment) n=1 Tax=Brenthis ino TaxID=405034 RepID=A0A8J9YHC1_9NEOP)

HSP 1 Score: 53.5 bits (127), Expect = 1.200e-6
Identity = 25/70 (35.71%), Postives = 47/70 (67.14%), Query Frame = 0
Query:    1 WRAIDVYARVDEDLQVKTEAGAFVTIGFWALMVVLVVGEIQAFLRTPPPIERVVVDSTMGHRLRINADVV 70
            ++ +D YA+  ED +VKT  GA +T+    +M++L++ E+  ++ +P   E + VD++ GH+LRIN D++
Sbjct:    9 FKQLDAYAKTLEDFRVKTATGAIITVTGSIIMILLILSELHTYM-SPNISEELFVDTSRGHKLRINFDII 77          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig12232.1397.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K090_9PHAE6.900e-2270.59Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CGD9_9STRA4.130e-1047.83Endoplasmic reticulum vesicle transporter-domain-c... [more]
A0A821M1D3_9NEOP5.000e-837.14Hypothetical protein n=1 Tax=Pieris macdunnoughi T... [more]
A0A8B8HSZ8_9NEOP1.060e-741.43endoplasmic reticulum-Golgi intermediate compartme... [more]
A0A8B8HSE8_9NEOP1.130e-741.43endoplasmic reticulum-Golgi intermediate compartme... [more]
UPI001E6622DA2.890e-737.14endoplasmic reticulum-Golgi intermediate compartme... [more]
A0A6J1PBG8_BICAN3.950e-737.14endoplasmic reticulum-Golgi intermediate compartme... [more]
A0A7S2Y179_9STRA5.370e-739.39Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A182FV96_ANOAL5.610e-741.79U4/U6 small nuclear ribonucleoprotein Prp31 n=1 Ta... [more]
A0A8J9YHC1_9NEOP1.200e-635.71(lesser marbled fritillary) hypothetical protein (... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039542Endoplasmic reticulum vesicle transporter, N-terminalPFAMPF13850ERGIC_Ncoord: 2..69
e-value: 7.9E-13
score: 48.6
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..44
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..19
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 45..70
NoneNo IPR availableTMHMMTMhelixcoord: 21..43

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig12232contigS-dermatodea_contig12232:6782..6991 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig12232.1397.1mRNA_S-dermatodea_contig12232.1397.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig12232 6782..6991 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig12232.1397.1 ID=prot_S-dermatodea_contig12232.1397.1|Name=mRNA_S-dermatodea_contig12232.1397.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=70bp
WRAIDVYARVDEDLQVKTEAGAFVTIGFWALMVVLVVGEIQAFLRTPPPI
ERVVVDSTMGHRLRINADVV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039542Erv_N