mRNA_S-dermatodea_contig12232.1397.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig12232.1397.1 vs. uniprot
Match: A0A6H5K090_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K090_9PHAE) HSP 1 Score: 96.7 bits (239), Expect = 6.900e-22 Identity = 48/68 (70.59%), Postives = 56/68 (82.35%), Query Frame = 1
Query: 4 RAIDVYARVDEDLQVKTEAGAFVTIGFWALMVVLVVGEIQAFLRTPPPIERVVVDSTMGHRLRINADV 207
+ +DVYARVDEDLQV+TE GA VTIGFW LMVVL VGE+QA+ + P ERVVVDSTMG +LRIN D+
Sbjct: 45 KQLDVYARVDEDLQVRTETGAAVTIGFWVLMVVLCVGEVQAYRKVQAPTERVVVDSTMGQKLRINIDM 112
BLAST of mRNA_S-dermatodea_contig12232.1397.1 vs. uniprot
Match: A0A836CGD9_9STRA (Endoplasmic reticulum vesicle transporter-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGD9_9STRA) HSP 1 Score: 63.5 bits (153), Expect = 4.130e-10 Identity = 33/69 (47.83%), Postives = 50/69 (72.46%), Query Frame = 1
Query: 4 RAIDVYARVDEDLQVKTEAGAFVTIGFWALMVVLVVGEIQAFLRTPPPIERVV-VDSTMGHRLRINADV 207
R +D+YARV+EDL VKTE+GA VT+ FW L+V+LV E++ FL T E ++ VD+++G +L I ++
Sbjct: 42 RRMDLYARVNEDLTVKTESGATVTVVFWVLLVLLVTSEVRTFLATRTSREELMRVDTSLGRKLEIGLNM 110
BLAST of mRNA_S-dermatodea_contig12232.1397.1 vs. uniprot
Match: A0A8B8HSZ8_9NEOP (endoplasmic reticulum-Golgi intermediate compartment protein 3 isoform X2 n=1 Tax=Vanessa tameamea TaxID=334116 RepID=A0A8B8HSZ8_9NEOP) HSP 1 Score: 56.6 bits (135), Expect = 1.060e-7 Identity = 29/70 (41.43%), Postives = 47/70 (67.14%), Query Frame = 1
Query: 1 WRAIDVYARVDEDLQVKTEAGAFVTIGFWALMVVLVVGEIQAFLRTPPPIERVVVDSTMGHRLRINADVV 210
++ D YA+ ED +VKT GAF+TI +MV+L++ E+ +L +P E + VD++ GH+LRIN D++
Sbjct: 9 FKQFDAYAKTLEDFRVKTATGAFITITGAVIMVLLILSEMHTYL-SPNISEELFVDTSRGHKLRINFDII 77
BLAST of mRNA_S-dermatodea_contig12232.1397.1 vs. uniprot
Match: A0A8B8HSE8_9NEOP (endoplasmic reticulum-Golgi intermediate compartment protein 3 isoform X1 n=4 Tax=Nymphalinae TaxID=40040 RepID=A0A8B8HSE8_9NEOP) HSP 1 Score: 56.6 bits (135), Expect = 1.130e-7 Identity = 29/70 (41.43%), Postives = 47/70 (67.14%), Query Frame = 1
Query: 1 WRAIDVYARVDEDLQVKTEAGAFVTIGFWALMVVLVVGEIQAFLRTPPPIERVVVDSTMGHRLRINADVV 210
++ D YA+ ED +VKT GAF+TI +MV+L++ E+ +L +P E + VD++ GH+LRIN D++
Sbjct: 9 FKQFDAYAKTLEDFRVKTATGAFITITGAVIMVLLILSEMHTYL-SPNISEELFVDTSRGHKLRINFDII 77
BLAST of mRNA_S-dermatodea_contig12232.1397.1 vs. uniprot
Match: A0A6J1PBG8_BICAN (endoplasmic reticulum-Golgi intermediate compartment protein 3 n=5 Tax=Satyrini TaxID=127320 RepID=A0A6J1PBG8_BICAN) HSP 1 Score: 55.1 bits (131), Expect = 3.950e-7 Identity = 26/70 (37.14%), Postives = 47/70 (67.14%), Query Frame = 1
Query: 1 WRAIDVYARVDEDLQVKTEAGAFVTIGFWALMVVLVVGEIQAFLRTPPPIERVVVDSTMGHRLRINADVV 210
++ +D YA+ ED +VKT GA +T+ +MV+L++ E+ ++ +P E + VD++ GH+LRIN D++
Sbjct: 9 FKQLDAYAKTLEDFRVKTATGAIITVSGAVIMVLLILSELHTYM-SPNISEELFVDTSRGHKLRINFDII 77
BLAST of mRNA_S-dermatodea_contig12232.1397.1 vs. uniprot
Match: A0A7S2Y179_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y179_9STRA) HSP 1 Score: 53.1 bits (126), Expect = 5.370e-7 Identity = 26/66 (39.39%), Postives = 45/66 (68.18%), Query Frame = 1
Query: 10 IDVYARVDEDLQVKTEAGAFVTIGFWALMVVLVVGEIQAFLRTPPPIERVVVDSTMGHRLRINADV 207
+DVY++V++D ++KT G V++ W L+VVLVV E +++ E +VVD T+G +LRI+ ++
Sbjct: 31 LDVYSKVEDDFKIKTSQGGTVSVMVWVLVVVLVVTETLQYMKREQR-EHMVVDQTLGQKLRIDLNI 95
BLAST of mRNA_S-dermatodea_contig12232.1397.1 vs. uniprot
Match: A0A182FV96_ANOAL (U4/U6 small nuclear ribonucleoprotein Prp31 n=1 Tax=Anopheles albimanus TaxID=7167 RepID=A0A182FV96_ANOAL) HSP 1 Score: 54.7 bits (130), Expect = 5.610e-7 Identity = 28/67 (41.79%), Postives = 46/67 (68.66%), Query Frame = 1
Query: 4 RAIDVYARVDEDLQVKTEAGAFVTIGFWALMVVLVVGEIQAFLRTPPPIERVVVDSTMGHRLRINAD 204
R +D Y ++D + ++T +GA +T+ ++VVLV+GEI A+L +P E + VD+T GH+L+IN D
Sbjct: 8 RRLDAYPKIDNEFSIRTVSGAALTLVSSIVIVVLVIGEINAYL-SPNISEELFVDTTRGHKLQINLD 73
BLAST of mRNA_S-dermatodea_contig12232.1397.1 vs. uniprot
Match: A0A8J9YHC1_9NEOP ((lesser marbled fritillary) hypothetical protein (Fragment) n=1 Tax=Brenthis ino TaxID=405034 RepID=A0A8J9YHC1_9NEOP) HSP 1 Score: 53.5 bits (127), Expect = 1.200e-6 Identity = 25/70 (35.71%), Postives = 47/70 (67.14%), Query Frame = 1
Query: 1 WRAIDVYARVDEDLQVKTEAGAFVTIGFWALMVVLVVGEIQAFLRTPPPIERVVVDSTMGHRLRINADVV 210
++ +D YA+ ED +VKT GA +T+ +M++L++ E+ ++ +P E + VD++ GH+LRIN D++
Sbjct: 9 FKQLDAYAKTLEDFRVKTATGAIITVTGSIIMILLILSELHTYM-SPNISEELFVDTSRGHKLRINFDII 77
BLAST of mRNA_S-dermatodea_contig12232.1397.1 vs. uniprot
Match: A0A1E1WGK1_PECGO (ERGIC_N domain-containing protein n=1 Tax=Pectinophora gossypiella TaxID=13191 RepID=A0A1E1WGK1_PECGO) HSP 1 Score: 52.4 bits (124), Expect = 1.310e-6 Identity = 28/70 (40.00%), Postives = 44/70 (62.86%), Query Frame = 1
Query: 1 WRAIDVYARVDEDLQVKTEAGAFVTIGFWALMVVLVVGEIQAFLRTPPPIERVVVDSTMGHRLRINADVV 210
+R +D YA+ ED +VKT GA VT+ +M+ L + E+ ++ +P E + VD++ GH+LRIN D V
Sbjct: 9 FRQLDAYAKTLEDFRVKTATGAAVTVSGVVIMIFLFLSELHTYM-SPNISEELFVDTSRGHKLRINLDFV 77
BLAST of mRNA_S-dermatodea_contig12232.1397.1 vs. uniprot
Match: A0A182YRI8_ANOST (Uncharacterized protein n=1 Tax=Anopheles stephensi TaxID=30069 RepID=A0A182YRI8_ANOST) HSP 1 Score: 53.5 bits (127), Expect = 1.340e-6 Identity = 27/67 (40.30%), Postives = 45/67 (67.16%), Query Frame = 1
Query: 4 RAIDVYARVDEDLQVKTEAGAFVTIGFWALMVVLVVGEIQAFLRTPPPIERVVVDSTMGHRLRINAD 204
R +D Y ++D + ++T +GA +T+ ++V LV+GEI A+L +P E + VD+T GH+L+IN D
Sbjct: 8 RRLDAYPKIDNEFSIRTVSGAALTLISTIVIVTLVIGEINAYL-SPNISEELFVDTTRGHKLKINLD 73 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig12232.1397.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig12232.1397.1 >prot_S-dermatodea_contig12232.1397.1 ID=prot_S-dermatodea_contig12232.1397.1|Name=mRNA_S-dermatodea_contig12232.1397.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=70bp WRAIDVYARVDEDLQVKTEAGAFVTIGFWALMVVLVVGEIQAFLRTPPPIback to top mRNA from alignment at S-dermatodea_contig12232:6782..6991+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig12232.1397.1 ID=mRNA_S-dermatodea_contig12232.1397.1|Name=mRNA_S-dermatodea_contig12232.1397.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=210bp|location=Sequence derived from alignment at S-dermatodea_contig12232:6782..6991+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig12232:6782..6991+ >mRNA_S-dermatodea_contig12232.1397.1 ID=mRNA_S-dermatodea_contig12232.1397.1|Name=mRNA_S-dermatodea_contig12232.1397.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=420bp|location=Sequence derived from alignment at S-dermatodea_contig12232:6782..6991+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |