prot_S-dermatodea_contig12229.1392.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig12229.1392.1
Unique Nameprot_S-dermatodea_contig12229.1392.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length187
Homology
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BLAST of mRNA_S-dermatodea_contig12229.1392.1 vs. uniprot
Match: A0A6H5JN11_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN11_9PHAE)

HSP 1 Score: 54.3 bits (129), Expect = 6.690e-6
Identity = 24/39 (61.54%), Postives = 31/39 (79.49%), Query Frame = 0 
Query:   44 DEDEGDDTPALFVTGMPRDVWANPSLGALAALIDEAQDE 82
            ++++ +D  ALF T MPRDVWANPSL ALAA+IDE  +E
Sbjct:    8 EQEKDEDVCALFATSMPRDVWANPSLAALAAMIDEDAEE 46
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig12229.1392.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JN11_9PHAE6.690e-661.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig12229contigS-dermatodea_contig12229:1736..3397 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig12229.1392.1mRNA_S-dermatodea_contig12229.1392.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig12229 1736..3397 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig12229.1392.1 ID=prot_S-dermatodea_contig12229.1392.1|Name=mRNA_S-dermatodea_contig12229.1392.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=187bp
AESLDTPAANTIELPDTMDMELSEAVGVSSKPGLSIDASKDARDEDEGDD
TPALFVTGMPRDVWANPSLGALAALIDEAQDEEGDGREVHQGDGSPTNAA
SDSDSAGDAEAVSGKALPTTGQAGQEHGGHSNGMDGVGSGATPSGDGAES
FASAPGDLSSSRSSSVKGSGAGRQHREDLRARRRDRR
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