mRNA_S-dermatodea_contig1220.1378.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig1220.1378.1
Unique NamemRNA_S-dermatodea_contig1220.1378.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
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BLAST of mRNA_S-dermatodea_contig1220.1378.1 vs. uniprot
Match: A0A6H5JP28_9PHAE (CS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JP28_9PHAE)

HSP 1 Score: 327 bits (838), Expect = 6.160e-107
Identity = 179/245 (73.06%), Postives = 191/245 (77.96%), Query Frame = 1 
Query:  319 MVDYSRFDHIGSDSXXXXXXXXXXXXXAPRPPPVAMVGGGHEKGEASTGGVSPAPPPSAPPXXXXXXXXXXAAGGS---IPQPMMMTASKQGKEGRIKFEHEGRTVYEWEQSLEEVNLYIDTPPGLQADSIECKITPKHIRLGVKGNPPFIDEDTGGPVVVEESYWMMDGGELNVNLQKMKKADTWPAALQGRGTKVDPITLEGMQKKIMLERFQAENPGFDFSGADFNGQVPDARTFMGGVKYT 1044
            MVDYSRFDHIGSDS             A RP                              XXXXXXXXXX  GGS   +PQP MMTASK+GKEGRIKFEHEGRTVYEWEQSLEEVNLYI+TPPG++AD IEC ITP+HI LG+KGNPPFIDEDTGGPVVVEESYWMMDGGELNVNLQKMKKADTWPAALQGR T+VDP+TLEGMQKKIMLERFQ+ENPGFDFSGA+FNGQVPDAR+FMGGVKYT
Sbjct:    1 MVDYSRFDHIGSDSDDDGAAVGSSKPTAMRPDXXXXXXXXXXXXXXXXXXXXXXXXXXX--XXXXXXXXXXXEGGSRASVPQPKMMTASKKGKEGRIKFEHEGRTVYEWEQSLEEVNLYIETPPGVKADRIECTITPRHICLGLKGNPPFIDEDTGGPVVVEESYWMMDGGELNVNLQKMKKADTWPAALQGRNTQVDPMTLEGMQKKIMLERFQSENPGFDFSGAEFNGQVPDARSFMGGVKYT 243
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BLAST of mRNA_S-dermatodea_contig1220.1378.1 vs. uniprot
Match: A0A835YMR3_9STRA (Nuclear movement domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMR3_9STRA)

HSP 1 Score: 232 bits (592), Expect = 4.990e-70
Identity = 104/158 (65.82%), Postives = 124/158 (78.48%), Query Frame = 1 
Query:  571 ASKQGKEGRIKFEHEGRTVYEWEQSLEEVNLYIDTPPGLQADSIECKITPKHIRLGVKGNPPFIDEDTGGPVVVEESYWMMDGGELNVNLQKMKKADTWPAALQGRGTKVDPITLEGMQKKIMLERFQAENPGFDFSGADFNGQVPDARTFMGGVKYT 1044
            AS +G+EGRI F+H+GR +YEWEQSLEEVN+Y+  PPG+ + +I+C I   H+ +G+KGNPPFIDEDT GPV V ESYWMM+GGELN+NLQK  K  TW  AL G G   DP+T E MQKK+MLERFQ ENPGFDFS A+F+G VPD   FMGGVKYT
Sbjct:   84 ASTKGREGRISFQHDGREIYEWEQSLEEVNIYVKPPPGVASSAIQCSIGHTHLSVGIKGNPPFIDEDTWGPVKVSESYWMMEGGELNLNLQKAVKGSTWGGALAGSGQAADPLTREEMQKKLMLERFQEENPGFDFSQAEFSGAVPDPTKFMGGVKYT 241
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BLAST of mRNA_S-dermatodea_contig1220.1378.1 vs. uniprot
Match: F0XX75_AURAN (CS domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XX75_AURAN)

HSP 1 Score: 219 bits (559), Expect = 4.070e-66
Identity = 98/156 (62.82%), Postives = 124/156 (79.49%), Query Frame = 1 
Query:  577 KQGKEGRIKFEHEGRTVYEWEQSLEEVNLYIDTPPGLQADSIECKITPKHIRLGVKGNPPFIDEDTGGPVVVEESYWMMDGGELNVNLQKMKKADTWPAALQGRGTKVDPITLEGMQKKIMLERFQAENPGFDFSGADFNGQVPDARTFMGGVKYT 1044
            K  ++GR +F+HEGR +YEW+QSLE+VN+YI  PPG+  D I+C I+P H+RLG++GNPPF+DE TGGPVVV+ES+W M+ GEL V   KM+K +TW  AL  RG KVDP T + +Q+++MLERFQ ENPGFDF  A+FNGQVPD R FMGGVKYT
Sbjct:   16 KGSEKGRYQFKHEGRVIYEWDQSLEDVNIYITPPPGVVPDMIDCTISPNHLRLGLRGNPPFLDEATGGPVVVKESHWYMNDGELTVLFAKMRKGETWDGALATRG-KVDPFTRQEIQREMMLERFQEENPGFDFRSAEFNGQVPDPRAFMGGVKYT 170
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BLAST of mRNA_S-dermatodea_contig1220.1378.1 vs. uniprot
Match: A0A7S4EBP3_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4EBP3_9STRA)

HSP 1 Score: 213 bits (543), Expect = 4.960e-62
Identity = 92/156 (58.97%), Postives = 124/156 (79.49%), Query Frame = 1 
Query:  577 KQGKEGRIKFEHEGRTVYEWEQSLEEVNLYIDTPPGLQADSIECKITPKHIRLGVKGNPPFIDEDTGGPVVVEESYWMMDGGELNVNLQKMKKADTWPAALQGRGTKVDPITLEGMQKKIMLERFQAENPGFDFSGADFNGQVPDARTFMGGVKYT 1044
            K  + GR +F+HEGR +YEW+QSLE+VN+Y+  PPG+  D I+CK+TP H+RLG++GNPPF+DE TGGP+V +ES++ M  GE+ V + KM+K +TW  AL GRG +VDP T + +Q+++M+ERFQ E+PGFDF  A+FNGQVPD R FMGGVKYT
Sbjct:  140 KGSEVGRYQFKHEGRLIYEWDQSLEDVNIYVKPPPGVTPDMIDCKLTPSHLRLGLRGNPPFLDEPTGGPIVAKESHFYMVDGEITVAMSKMRKGETWGTALGGRG-QVDPFTRQEIQRELMIERFQEEHPGFDFRSAEFNGQVPDPRAFMGGVKYT 294
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BLAST of mRNA_S-dermatodea_contig1220.1378.1 vs. uniprot
Match: A0A8J2WTL1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WTL1_9STRA)

HSP 1 Score: 211 bits (538), Expect = 1.320e-61
Identity = 91/155 (58.71%), Postives = 123/155 (79.35%), Query Frame = 1 
Query:  577 KQGKEGRIKFEHEGRTVYEWEQSLEEVNLYIDTPPGLQADSIECKITPKHIRLGVKGNPPFIDEDTGGPVVVEESYWMMDGGELNVNLQKMKKADTWPAALQGRGTKVDPITLEGMQKKIMLERFQAENPGFDFSGADFNGQVPDARTFMGGVKY 1041
            K  + GR +F+HEGR +YEW+QSLE+VN+Y+  PPG+  D I+CK+TP H+RLG++GNPPF+DE TGGP+V +ES++ M  GE+ V + KM+K +TW  AL GRG +VDP T + +Q+++M+ERFQ E+PGFDF  A+FNGQVPD R FMGGVKY
Sbjct:   84 KGSEVGRYQFKHEGRLIYEWDQSLEDVNIYVKPPPGVTPDMIDCKLTPSHLRLGLRGNPPFLDEPTGGPIVAKESHFYMVDGEITVAMSKMRKGETWGTALGGRG-QVDPFTRQEIQRELMIERFQEEHPGFDFRSAEFNGQVPDPRAFMGGVKY 237
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BLAST of mRNA_S-dermatodea_contig1220.1378.1 vs. uniprot
Match: A0A067CAW0_SAPPC (CS domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CAW0_SAPPC)

HSP 1 Score: 202 bits (514), Expect = 1.400e-59
Identity = 91/151 (60.26%), Postives = 116/151 (76.82%), Query Frame = 1 
Query:  592 GRIKFEHEGRTVYEWEQSLEEVNLYIDTPPGLQADSIECKITPKHIRLGVKGNPP-FIDEDTGGPVVVEESYWMMDGGELNVNLQKMKKADTWPAALQGRGTKVDPITLEGMQKKIMLERFQAENPGFDFSGADFNGQVPDARTFMGGVKY 1041
            GR  F+H+G+ +YEWEQSLEEVN++I  PPG+ A  + C I+P H+ LG+KGN   ++D +    VVV ESYWM+DGGELN+NLQKMKK  TW A   G G ++DP+T + +QKK++LERFQ ENPGFDFS A+FNG  PDARTFMGGV+Y
Sbjct:    9 GRRAFKHQGQVIYEWEQSLEEVNIFIKPPPGVTASHLLCTISPSHVMLGIKGNAERYLDHELTSQVVVAESYWMLDGGELNINLQKMKKGLTWDAVFVGHG-ELDPLTKDEVQKKLLLERFQQENPGFDFSNAEFNGSAPDARTFMGGVRY 158
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BLAST of mRNA_S-dermatodea_contig1220.1378.1 vs. uniprot
Match: A0A7S2MQ41_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MQ41_9STRA)

HSP 1 Score: 204 bits (520), Expect = 2.820e-59
Identity = 95/169 (56.21%), Postives = 122/169 (72.19%), Query Frame = 1 
Query:  538 GGSIPQPMMMTASKQGKEGRIKFEHEGRTVYEWEQSLEEVNLYIDTPPGLQADSIECKITPKHIRLGVKGNPPFIDEDTGGPVVVEESYWMMDGGELNVNLQKMKKADTWPAALQGRGTKVDPITLEGMQKKIMLERFQAENPGFDFSGADFNGQVPDARTFMGGVKYT 1044
            GG+     M    K  + GR KFEH G+T+YEW+Q L+EVNL+I  P G+    +  +I   H+++G+KGNPPF+D  TGG V+V ES+W    GE+NVNLQKM+K  TW AAL G G ++DP++ +  QK++MLERFQ ENPGFDFS A+FNGQVPDAR FMGGVKYT
Sbjct:   78 GGTEGLKSMKVTPKGSEAGRHKFEHNGQTIYEWDQDLQEVNLWIRPPEGVTTAHLHVEIAHAHLKVGIKGNPPFLDHPTGGEVIVAESFWSFQDGEVNVNLQKMRKGLTWMAALAGHG-QLDPLSQQEDQKRLMLERFQEENPGFDFSNAEFNGQVPDARQFMGGVKYT 245
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BLAST of mRNA_S-dermatodea_contig1220.1378.1 vs. uniprot
Match: A0A2R5GR63_9STRA (NudC domain-containing protein 2 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GR63_9STRA)

HSP 1 Score: 200 bits (508), Expect = 9.250e-59
Identity = 91/153 (59.48%), Postives = 114/153 (74.51%), Query Frame = 1 
Query:  583 GKEGRIKFEHEGRTVYEWEQSLEEVNLYIDTPPGLQADSIECKITPKHIRLGVKGNPPFIDEDTGGPVVVEESYWMMDGGELNVNLQKMKKADTWPAALQGRGTKVDPITLEGMQKKIMLERFQAENPGFDFSGADFNGQVPDARTFMGGVKY 1041
            G+  R +FEH+GR VYEWEQ+L+EV +Y+  P G+ A  IECKI+  H+ LG+KGNPPFIDED G      ES W MD GEL +NL+KM+KA TW +AL+G G  +DP+  + +QKK+ LERFQ E+PGFDFSGADF+G  PD RTFM GVKY
Sbjct:    2 GESKRHRFEHDGRLVYEWEQNLDEVLIYVRPPEGVTAKMIECKISKNHLTLGIKGNPPFIDEDLGDSCEAGESMWTMDDGELEINLKKMRKASTWESALKGHGA-LDPVAKQEVQKKMTLERFQEEHPGFDFSGADFSGAAPDPRTFMDGVKY 153
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BLAST of mRNA_S-dermatodea_contig1220.1378.1 vs. uniprot
Match: A0A024TMB2_9STRA (CS domain-containing protein n=3 Tax=Aphanomyces TaxID=100860 RepID=A0A024TMB2_9STRA)

HSP 1 Score: 199 bits (507), Expect = 1.530e-58
Identity = 93/152 (61.18%), Postives = 113/152 (74.34%), Query Frame = 1 
Query:  592 GRIKFEHEGRTVYEWEQSLEEVNLYIDTPPGLQADSIECKITPKHIRLGVKGNPP-FIDEDTGGPVVVEESYWMMDGGELNVNLQKMKKADTWPAALQGRGTKVDPITLEGMQKKIMLERFQAENPGFDFSGADFNGQVPDARTFMGGVKYT 1044
            GR  F H+G+ +YEWEQSLEEVNL+I  PPG+ A  + C ITP  + LG+KG+   F+D +    VV +ESYWM+DGGELN+NLQKMKK  TW     G G ++DP+T   +QKK+MLERFQ ENPGFDFS A+FNG  PDARTFMGGVKYT
Sbjct:    9 GRRSFTHQGQLIYEWEQSLEEVNLFIRPPPGITAAHLNCTITPTRLTLGLKGSADRFLDHEFSSQVVADESYWMLDGGELNINLQKMKKGLTWDCVFVGHG-ELDPLTKGEVQKKLMLERFQQENPGFDFSNAEFNGAAPDARTFMGGVKYT 159
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BLAST of mRNA_S-dermatodea_contig1220.1378.1 vs. uniprot
Match: A0A4D9DCE6_9STRA (CS domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DCE6_9STRA)

HSP 1 Score: 201 bits (511), Expect = 2.300e-58
Identity = 90/155 (58.06%), Postives = 120/155 (77.42%), Query Frame = 1 
Query:  580 QGKEGRIKFEHEGRTVYEWEQSLEEVNLYIDTPPGLQADSIECKITPKHIRLGVK-GNPPFIDEDTGGPVVVEESYWMMDGGELNVNLQKMKKADTWPAALQGRGTKVDPITLEGMQKKIMLERFQAENPGFDFSGADFNGQVPDARTFMGGVKY 1041
            +GKEGR+KFE++GRT+YEWEQ+LE+V++Y+  P G++A  + C I   H+ LG+K    PFIDE TGG V   ES+W ++ GEL+V LQK KK + WP+AL GRG+ +DP+T E ++K++MLERFQ ENPGFDFS A+FNG VPD  TF+GGVKY
Sbjct:   60 KGKEGRLKFEYDGRTIYEWEQTLEDVSIYVTPPSGVKASMLRCTIASSHLTLGLKEAGHPFIDEATGGSVKAAESFWTLEDGELHVLLQKAKKGEVWPSALAGRGS-LDPVTSESVRKQLMLERFQEENPGFDFSNAEFNGAVPDPETFLGGVKY 213
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1220.1378.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JP28_9PHAE6.160e-10773.06CS domain-containing protein n=2 Tax=Ectocarpus Ta... [more]
A0A835YMR3_9STRA4.990e-7065.82Nuclear movement domain-containing protein n=1 Tax... [more]
F0XX75_AURAN4.070e-6662.82CS domain-containing protein n=1 Tax=Aureococcus a... [more]
A0A7S4EBP3_9STRA4.960e-6258.97Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
A0A8J2WTL1_9STRA1.320e-6158.71Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A067CAW0_SAPPC1.400e-5960.26CS domain-containing protein n=2 Tax=Saprolegnia T... [more]
A0A7S2MQ41_9STRA2.820e-5956.21Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A2R5GR63_9STRA9.250e-5959.48NudC domain-containing protein 2 n=1 Tax=Hondaea f... [more]
A0A024TMB2_9STRA1.530e-5861.18CS domain-containing protein n=3 Tax=Aphanomyces T... [more]
A0A4D9DCE6_9STRA2.300e-5858.06CS domain-containing protein n=2 Tax=Monodopsidace... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig1220contigS-dermatodea_contig1220:8233..11959 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score326.2
Seed ortholog evalue1.3e-86
Seed eggNOG ortholog2880.D8LBJ0
Preferred nameNUDCD2
KEGG koko:K12827
KEGG Pathwayko03040,map03040
KEGG ModuleM00352
GOsGO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006457,GO:0008150,GO:0009987,GO:0032502,GO:0044424,GO:0044464,GO:0051082
EggNOG free text desc.unfolded protein binding
EggNOG OGsKOG2265@1,KOG2265@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03041
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionHSP20-like chaperone
Ec32 orthologEc-27_003800.1
Exons5
Model size1476
Cds size729
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924236.837557-UTR-S-dermatodea_contig1220:8232..85501622924236.837557-UTR-S-dermatodea_contig1220:8232..8550Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig1220 8233..8550 +
1694079115.1132574-UTR-S-dermatodea_contig1220:8232..85501694079115.1132574-UTR-S-dermatodea_contig1220:8232..8550Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig1220 8233..8550 +
1622924236.899618-UTR-S-dermatodea_contig1220:11530..119591622924236.899618-UTR-S-dermatodea_contig1220:11530..11959Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig1220 11531..11959 +
1694079115.178915-UTR-S-dermatodea_contig1220:11530..119591694079115.178915-UTR-S-dermatodea_contig1220:11530..11959Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig1220 11531..11959 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924236.8503633-CDS-S-dermatodea_contig1220:8550..88481622924236.8503633-CDS-S-dermatodea_contig1220:8550..8848Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1220 8551..8848 +
1694079115.13152-CDS-S-dermatodea_contig1220:8550..88481694079115.13152-CDS-S-dermatodea_contig1220:8550..8848Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1220 8551..8848 +
1622924236.8608973-CDS-S-dermatodea_contig1220:9310..94591622924236.8608973-CDS-S-dermatodea_contig1220:9310..9459Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1220 9311..9459 +
1694079115.140973-CDS-S-dermatodea_contig1220:9310..94591694079115.140973-CDS-S-dermatodea_contig1220:9310..9459Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1220 9311..9459 +
1622924236.8725889-CDS-S-dermatodea_contig1220:10253..103021622924236.8725889-CDS-S-dermatodea_contig1220:10253..10302Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1220 10254..10302 +
1694079115.1489458-CDS-S-dermatodea_contig1220:10253..103021694079115.1489458-CDS-S-dermatodea_contig1220:10253..10302Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1220 10254..10302 +
1622924236.8820093-CDS-S-dermatodea_contig1220:10960..111061622924236.8820093-CDS-S-dermatodea_contig1220:10960..11106Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1220 10961..11106 +
1694079115.1580124-CDS-S-dermatodea_contig1220:10960..111061694079115.1580124-CDS-S-dermatodea_contig1220:10960..11106Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1220 10961..11106 +
1622924236.8907764-CDS-S-dermatodea_contig1220:11443..115301622924236.8907764-CDS-S-dermatodea_contig1220:11443..11530Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1220 11444..11530 +
1694079115.1684384-CDS-S-dermatodea_contig1220:11443..115301694079115.1684384-CDS-S-dermatodea_contig1220:11443..11530Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1220 11444..11530 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig1220.1378.1prot_S-dermatodea_contig1220.1378.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig1220 8551..11530 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig1220.1378.1

>prot_S-dermatodea_contig1220.1378.1 ID=prot_S-dermatodea_contig1220.1378.1|Name=mRNA_S-dermatodea_contig1220.1378.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=243bp
MVDYSRFDHIGSDSDSDEAVSIPTPTMAPRPPPVAMVGGGHEKGEASTGG
VSPAPPPSAPPPAPTPGDPAPAAGGSIPQPMMMTASKQGKEGRIKFEHEG
RTVYEWEQSLEEVNLYIDTPPGLQADSIECKITPKHIRLGVKGNPPFIDE
DTGGPVVVEESYWMMDGGELNVNLQKMKKADTWPAALQGRGTKVDPITLE
GMQKKIMLERFQAENPGFDFSGADFNGQVPDARTFMGGVKYT*
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mRNA from alignment at S-dermatodea_contig1220:8233..11959+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig1220.1378.1 ID=mRNA_S-dermatodea_contig1220.1378.1|Name=mRNA_S-dermatodea_contig1220.1378.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=3727bp|location=Sequence derived from alignment at S-dermatodea_contig1220:8233..11959+ (Saccorhiza dermatodea SderLu1190fm monoicous)
CCCAAAACACGCGGGATGCTTGATTAGGAGGCAATTGCTTGATTGAATTG
CCTGTTGCGCAATCGCTCTAGTGCTGTAGCAGCAGGCTAACCAAGCCGGC
AGAGAAGACGCCAGGCGAAGCAGGGAAGGCCAGGCACAGTGTGAGGACCG
TGCCGACGTCGGCTGCTCGTTTGCTGATATCCCTCTGCAAACGTGTTCGG
CTGCAAGCGGTCCGTACTCGTACTCCGTATCACGTTTCCACCGCCAGACC
GCAATCATAAGTAAGATCATCACGAGAAACGGCACGTGTGAGAACTTCTG
TCAGCAGGACAGATCATCATGGTGGACTACTCTCGCTTCGATCACATCGG
TTCAGACTCGGACTCAGATGAGGCTGTGTCCATCCCTACGCCCACAATGG
CACCGAGACCACCCCCGGTGGCAATGGTCGGGGGCGGGCATGAGAAGGGG
GAAGCTTCGACAGGCGGGGTATCACCAGCACCACCACCATCAGCACCACC
ACCAGCACCAACACCAGGTGATCCGGCTCCAGCAGCAGGCGGTTCTATAC
CCCAGCCGATGATGATGACAGCGTCGAAGCAGGGGAAGGAAGGCCGGATC
AAGTTCGAGCACGAAGGCGAGTTTAATTTACTCATTTTCTGCAGCTTTTG
ACGTTTTTTGTCGTGGTATGGATACAGCTGTGATGTACCTGGTACCTGGT
ACCTGGTACCAGGTATATAGTACCAGGTATCTATGATGAAGAAATATTAA
TATTTGTAATGCACAAACCTGTGGTCTTTCTTCTCTGTGATCGATTCAGG
TGCTCGTGACTGTCGGACGGGGGGAACTCTATCGCCCCCCCCCCGCCGTG
TCCTGAAGAACGCCATGGAGTAGCCCGCGACGATTAACCTCGACGCGCTC
TTCGTCTCTTGCAGATTCCCGTACTCACGGGTAGGACTTTGTCGGCGTGC
GAGCAATATCTGGAAGAGGAAAACGTGTAAACAGCAGTAGTTACTGACAG
TACTATAATACTGCAGTTGTACAGAGCACAGATAAATCACGGCTCGCTGC
TCGTCTCTCGCACGTTTCCCGCACCCAGGCAGGACAGTGTACGAGTGGGA
ACAGTCTCTGGAAGAGGTGAACTTGTACATCGACACGCCGCCGGGGCTGC
AGGCGGATAGCATCGAGTGCAAGATCACTCCCAAGCACATCCGTCTGGGG
GTAAAGGGCAATCCCCCCTTCATAGATGTGAGCGGCTGCTTATTATTTAC
AGTTGCTGTGACGCCGGAAATATCGTTATTATCATACTTGTTGAGGAAGT
ATCCAGTCTGTATCGCCGAGGTCGTGCGCTGGCCTTAGCCACTACAATCC
AAAGTTCGTGGTACATCATCTCGCCTGCTCGGCTTTGCAGCTGCGATGGC
ATGGAGGGACGGCGCGATGCGGGTTAGTTCAAGCGGCGAGTAAATACAGC
AGTACTACTACTTCGTATAATAACAAATGTACACACCACAAATCTTTGGT
TCGACTTGAATTCTGGTTCGAGTTGTGGAGTTGGCTTATAGATAAATATG
AGATGCGGCAACCGTATGATGGCACCATGACCTGTCTTCCGCATATTGTT
CTGATACACCGGGCTGCTCCTGGCAGCTCAAGATGCATTCGAGAAAGAAG
CGTACGCGCACCATGTTTGTGCAGCTGGGCGTCACGACCTCTGCGATACG
GTAGATACATCCAAGTTGGCGACTTTGGAAAAATACCTATTATATATAGG
TATTTTTCCAAAGTTTGGCGACGGTACAGAAGAGTAGATACAATACATCC
GAGCCTACGGCGAGTTGGAAGTACGCCAACCAAAGGTGACCCTTCAGACC
AAGGGGGCGGTCCTATATCTCCACTGTTTTGCCGGCCTCGAGACGTGAGC
ATCATGGCGAAAACAGCATAATCTGCGTCAGTTGTTCGAGTTCAGTTCAA
CGTTGTCATTTCACCCAGTTCATTCAAGTATTGTATCGCGATCCTCTCGA
CGTGCCGTGTGTGATCGGCAGGAAGATACAGGCGGGCCCGTCGTTGTCGA
AGAGAGCTACTGGATGATGGGTGAGGACCGCCGATAGTGCTGTTGTTAGT
TAGTTTTTTGCCAGAGGTTTGCTAACACGCCTCACGGCACCATCTTTCGC
CCGGACCCAACCGTTTGAGGGGGCAAGGCGACAATGGGTTTCGACAGAGC
TGCAAGTATACTTCGTACAGCATGGTGTGTAGCGGACAATGAGCACATGC
GGCACAACAGAGCCCCTCATTCCGGCCGTGCGTATCGCCATTGCACCAGC
CGCCACTAGAGTGTGAGAAGCAGCGGGTTGTACCAAGTGTAAGACACCTC
GTCTCCGCGCCCAGGCAGTACTGTATGTATGTGTCCTGTGGCCGGCCCAT
TGCACAAGCCGTTCCTAACATGCTCCTCGTGAGGGGGACTTCACCCTGCT
GCATGTCTAGCGCTGTTTTCGAAGCAACGGGTGACTCGTAGTTGAATTCG
CCTCGTCGCGGAATTCGTGATTCCCCCCCCCCTCAGAACCAATCGCCATT
GCCAAGGCGAGACTCCGACTCAAAACCTGACGCCAGAGTGCGGCAGTGCG
TTTTGCCGTGCGTGGCTCTGTTCCCGACACCGCTTGTAGGAGGTGTTACA
TTGCTGACTTCACTTTCGTTGCCCTGTGACGCACGCCGTGGGCCCTCAAA
CCTTTACGTCGCGCGTGAATGCGTTTAGACGGAGGCGAGTTAAACGTGAA
CCTTCAGAAGATGAAGAAAGCCGACACTTGGCCGGCGGCTTTGCAGGGCA
GAGGCACAAAAGTGGACCCGATAACGCTTGAGGGGATGCAGAAAAAGATC
ATGCTCGAGAGGTTCCAGGCCGAGGTAACCGATCGTTCCATGTTCGGTGG
CCCGGTACCTCTATCGCCACCGAACAGAACCGGGCGAGCGCCTCGGTGAT
GGATATTACGATTGCTATTGTAGCGCTGCTCGTCTTGTTCGTCGTTGAGG
CTACGAGGCAACCAGCCACCTGCCGTTTGAGTTTTCCTCGAGGTGTAGCA
GGTGTTGTCGTGCTTGGTTTGAATCCCTGGTACAGTTTGAGGCTGCTGCT
TGATGAAGTCTTGCCTCCAAGGTCGCTCATCCATGCAGCTCACCCCTGCC
AACACGACGTCGCTGGACCTGACTTGCTCCTTTCCGTTTCTTTTTGCTTG
GTTTCGTTCAGAACCCTGGCTTCGACTTCTCTGGTGCGGATTTCAACGGC
CAAGTTCCAGACGCACGTACCTTCATGGGAGGAGTCAAGTACACGTGATC
ACTACTGGTTGATGATACACACCAACTGATCACCCATGTACTTGTACATA
TATATAGGCAGTGTATAAACAAATAAGTGGCGAAGATAGCTGGAGTCAAC
CATAATACTTCACTTGTGAACTGGGAGAGTCGGGGGGGAAATGGAGTGTG
TGCGCGGCCTCTGCGGGCAGGCCGTGAAGCCTGATACATACTTGAGGGTC
GTTTTGTTTCGTTCTGCGGGCAGGCCGTGAAGCCTGATACATACTTGAGG
GTCGTTTTGTTTCGCTCTGTTTTGAGCATATTCCGGGCAGGAGGAGGAGC
TTGTCGCAATTTATTCGGCGGTTTCATGCGCCTGCCACTGTTGCATCGAG
GTGCCCGTTCGTGCGTCAGACGGCACCATGGCCTATCTACCACAACATAT
ATTTCAATGCACATACATACAAACAGA
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Coding sequence (CDS) from alignment at S-dermatodea_contig1220:8233..11959+

>mRNA_S-dermatodea_contig1220.1378.1 ID=mRNA_S-dermatodea_contig1220.1378.1|Name=mRNA_S-dermatodea_contig1220.1378.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1458bp|location=Sequence derived from alignment at S-dermatodea_contig1220:8233..11959+ (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGGTGGACTACTCTCGCTTCGATCACATCGGTTCAGACTCGGACTCAGA
TGAGGCTGTGTCCATCCCTACGCCCACAATGGCACCGAGACCACCCCCGG
TGGCAATGGTCGGGGGCGGGCATGAGAAGGGGGAAGCTTCGACAGGCGGG
GTATCACCAGCACCACCACCATCAGCACCACCACCAGCACCAACACCAGG
TGATCCGGCTCCAGCAGCAGGCGGTTCTATACCCCAGCCGATGATGATGA
CAGCGTCGAAGCAGGGGAAGGAAGGCCGGATCAAGTTCGAGCACGAAGAT
GGTGGACTACTCTCGCTTCGATCACATCGGTTCAGACTCGGACTCAGATG
AGGCTGTGTCCATCCCTACGCCCACAATGGCACCGAGACCACCCCCGGTG
GCAATGGTCGGGGGCGGGCATGAGAAGGGGGAAGCTTCGACAGGCGGGGT
ATCACCAGCACCACCACCATCAGCACCACCACCAGCACCAACACCAGGTG
ATCCGGCTCCAGCAGCAGGCGGTTCTATACCCCAGCCGATGATGATGACA
GCGTCGAAGCAGGGGAAGGAAGGCCGGATCAAGTTCGAGCACGAAGGCAG
GACAGTGTACGAGTGGGAACAGTCTCTGGAAGAGGTGAACTTGTACATCG
ACACGCCGCCGGGGCTGCAGGCGGATAGCATCGAGTGCAAGATCACTCCC
AAGCACATCCGTCTGGGGGTAAAGGGCAATCCCCCCTTCATAGATGCAGG
ACAGTGTACGAGTGGGAACAGTCTCTGGAAGAGGTGAACTTGTACATCGA
CACGCCGCCGGGGCTGCAGGCGGATAGCATCGAGTGCAAGATCACTCCCA
AGCACATCCGTCTGGGGGTAAAGGGCAATCCCCCCTTCATAGATGAAGAT
ACAGGCGGGCCCGTCGTTGTCGAAGAGAGCTACTGGATGATGGGAAGATA
CAGGCGGGCCCGTCGTTGTCGAAGAGAGCTACTGGATGATGGACGGAGGC
GAGTTAAACGTGAACCTTCAGAAGATGAAGAAAGCCGACACTTGGCCGGC
GGCTTTGCAGGGCAGAGGCACAAAAGTGGACCCGATAACGCTTGAGGGGA
TGCAGAAAAAGATCATGCTCGAGAGGTTCCAGGCCGAGACGGAGGCGAGT
TAAACGTGAACCTTCAGAAGATGAAGAAAGCCGACACTTGGCCGGCGGCT
TTGCAGGGCAGAGGCACAAAAGTGGACCCGATAACGCTTGAGGGGATGCA
GAAAAAGATCATGCTCGAGAGGTTCCAGGCCGAGAACCCTGGCTTCGACT
TCTCTGGTGCGGATTTCAACGGCCAAGTTCCAGACGCACGTACCTTCATG
GGAGGAGTCAAGTACACGTGAAACCCTGGCTTCGACTTCTCTGGTGCGGA
TTTCAACGGCCAAGTTCCAGACGCACGTACCTTCATGGGAGGAGTCAAGT
ACACGTGA
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