mRNA_S-dermatodea_contig122.1374.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig122.1374.1
Unique NamemRNA_S-dermatodea_contig122.1374.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
BLAST of mRNA_S-dermatodea_contig122.1374.1 vs. uniprot
Match: A0A6H5KNV1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNV1_9PHAE)

HSP 1 Score: 306 bits (783), Expect = 3.450e-98
Identity = 180/378 (47.62%), Postives = 235/378 (62.17%), Query Frame = 1
Query:    4 SCFEGVIPEQGSIGAGDLESILRRDAELADVPHEAETFWVPADNANPSTSLEKIALSIFDFHVKSLRRQQAPHLNEA---PLDATPCTSNKASGVQPSPRPGYRRPRSSGERGNLLPSSARVGAESGAEWWVQVRQEGHHSNMGMPFHWDKDERLLEQSGRVVCPTVSTVTYLAGYGAPTVVLESRANGNGSVVEGPLDQAFISYPVLHKHLAFDGSFLHGVPEAMRRGDDRSQKGDERPIYHFTESWEARDKPSAQSRHKSCGVPQANDSSSRSSIERRRRGPVRVTLLVNVWLSHKPAGISPLPARIAATLSRGIDIPALSFERPVDFYPVPIQRET---PSSDE--AVQREAQTSTVVIEAPLGPKSMLELMAPT 1113
            SC+E V+          L+  L RD EL D PHEA+TFW+PAD A P+TSLE+IA +I+DFHV + +     H + A   P+ +TP     +  +    +PG  R  +S   G         G ESGAEWWVQ R+EG H+++GMPFHWDKDE +LEQ G VVCP+VSTVTYL GYGAPTVVLE+RA G+G+V EG ++Q F+SYP L KHLAFDG FLHGVPE + R  D+   G         E+    D    +SR     +P +N +       RRR+G +RVT LVNVWLSHKP GI+ LPA +A +LS  I +P L F+RP DF PVP+++E    PS +E     R  + S++++  PLGP  +LE+ APT
Sbjct:    3 SCYERVM-------GMTLQDALLRDVELIDNPHEAKTFWLPAD-ACPATSLERIAKAIYDFHVANKQHTHG-HQDSALTGPVGSTPSAVAHSGNIPSRDKPGVVRRDASSHTG---------GVESGAEWWVQQREEGRHASVGMPFHWDKDEEMLEQEGLVVCPSVSTVTYLTGYGAPTVVLEARATGSGTVQEGDINQTFVSYPALFKHLAFDGGFLHGVPEQLMRTGDQRVSGKVGRDGGRREARGGNDNHGIRSR---TSLPSSNGT-------RRRQGRMRVTFLVNVWLSHKPKGITSLPADVAGSLSN-ISVP-LCFDRPGDFVPVPVEKEQETQPSQEEDGGSIRGTKPSSMLLNVPLGPTLLLEVRAPT 350          
BLAST of mRNA_S-dermatodea_contig122.1374.1 vs. uniprot
Match: D7G6Z0_ECTSI (Putative LuxR domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6Z0_ECTSI)

HSP 1 Score: 231 bits (589), Expect = 7.420e-71
Identity = 124/235 (52.77%), Postives = 154/235 (65.53%), Query Frame = 1
Query:    4 SCFEGVIPEQGSIGAGDLESILRRDAELADVPHEAETFWVPADNANPSTSLEKIALSIFDFHVKSLRR-QQAPHLNEAPLDATPCTSNKASGVQPSPRPGYRRPRSSGERGNLLPSSARVGA-ESGAEWWVQVRQEGHHSNMGMPFHWDKDERLLEQSGRVVCPTVSTVTYLAGYGAPTVVLESRANGNGSVVEGPLDQAFISYPVLHKHLAFDGSFLHGVPEAMRRGDDRSQKG 702
            SC+E V+      G    +++LR D EL D PHEA+TFW+PAD A P+TSLEKIA +IFDFHV + +   Q       P+ +TP        +    +PG  R            +S+R G  ESGAEWWVQ R+EG H+++GMPFHWDKDE++LEQ G VVCP VSTVTYL GYGAPTVVLE+RA G+ +V EG ++Q F+SYP L KHLAFDG FLHGVPE + R  DR   G
Sbjct:    3 SCYERVL------GTTRQDALLR-DVELIDNPHEAKTFWLPAD-ACPATSLEKIAKAIFDFHVANKQHIGQQDSAPTGPVGSTPSAVAHGENIPCRDKPGVVR----------RDTSSRTGCVESGAEWWVQQREEGRHASLGMPFHWDKDEQMLEQEGLVVCPAVSTVTYLTGYGAPTVVLEARATGSRTVEEGDINQTFVSYPALFKHLAFDGGFLHGVPEQLMRTGDRRISG 219          
BLAST of mRNA_S-dermatodea_contig122.1374.1 vs. uniprot
Match: A0A812QHB8_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP2456 TaxID=1519616 RepID=A0A812QHB8_9DINO)

HSP 1 Score: 116 bits (290), Expect = 1.450e-24
Identity = 70/192 (36.46%), Postives = 90/192 (46.88%), Query Frame = 1
Query:  364 AESGAEWWVQVRQEGHHSNMGMPFHWDKDERLLEQSGRVVCPTVSTVTYLAGYGAPTVVLESRANGNGSVVE--GPLDQAFISYPVLHKHLAFDGSFLHGVPEAMRRGDDRSQKGDERPIYHFTESWEARDKPSAQSRHKSCGVPQANDSSSRSSIERRRRGPVRVTLLVNVWLSHKPAGISPLPARIAATL 933
            A SGAEWW QVRQ GHH   G+ FHWD DE  +E+    V P +STVTYL+  GAPT+VL  R +   S+    GP+ +  +S+P L KHL FDG FLHG   ++  G D                                                   GP RVT LVN+WL+H+P+    LP  ++  L
Sbjct:  803 ARSGAEWWAQVRQSGHHEE-GIQFHWDTDEVAVERHDVNVHPHLSTVTYLSESGAPTLVLACRNSRRPSLTSAYGPIHEGALSWPKLWKHLVFDGQFLHGTVPSLEYGKD---------------------------------------------------GP-RVTFLVNIWLNHRPSNCHRLPKSLSKRL 941          
BLAST of mRNA_S-dermatodea_contig122.1374.1 vs. uniprot
Match: A0A813AZR0_9DINO (KCNB2 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813AZR0_9DINO)

HSP 1 Score: 110 bits (275), Expect = 8.160e-23
Identity = 71/192 (36.98%), Postives = 91/192 (47.40%), Query Frame = 1
Query:  364 AESGAEWWVQVRQEGHHSNMGMPFHWDKDERLLEQSGRVVCPTVSTVTYLAGYGAPTVVLESRANGNGSVVE--GPLDQAFISYPVLHKHLAFDGSFLHGVPEAMRRGDDRSQKGDERPIYHFTESWEARDKPSAQSRHKSCGVPQANDSSSRSSIERRRRGPVRVTLLVNVWLSHKPAGISPLPARIAATL 933
            A SGAEWW QVRQ GHH   G+ FHWD DE  +E+    V P +STVTYL+  GAPT+VL  R +   S+    GP+ +  +S+P L KHL FDG FLHG                                           VP         S+E  +   +RVT LVNVWL+H+P+    LP  ++  L
Sbjct:  175 ARSGAEWWAQVRQSGHHEE-GIHFHWDTDEVAVERHDVNVHPHLSTVTYLSDSGAPTLVLACRNSRRPSLTSAYGPIYEGALSWPKLWKHLVFDGQFLHGT------------------------------------------VP---------SVEYSKG--LRVTFLVNVWLNHRPSNCHRLPKSLSKRL 312          
BLAST of mRNA_S-dermatodea_contig122.1374.1 vs. uniprot
Match: A0A1Q9EDB1_SYMMI (Uncharacterized protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A1Q9EDB1_SYMMI)

HSP 1 Score: 110 bits (275), Expect = 1.420e-22
Identity = 71/192 (36.98%), Postives = 91/192 (47.40%), Query Frame = 1
Query:  364 AESGAEWWVQVRQEGHHSNMGMPFHWDKDERLLEQSGRVVCPTVSTVTYLAGYGAPTVVLESRANGNGSVVE--GPLDQAFISYPVLHKHLAFDGSFLHGVPEAMRRGDDRSQKGDERPIYHFTESWEARDKPSAQSRHKSCGVPQANDSSSRSSIERRRRGPVRVTLLVNVWLSHKPAGISPLPARIAATL 933
            A SGAEWW QVRQ GHH   G+ FHWD DE  +E+    V P +STVTYL+  GAPT+VL  R +   S+    GP+ +  +S+P L KHL FDG FLHG                                           VP         S+E  +   +RVT LVNVWL+H+P+    LP  ++  L
Sbjct: 1405 ARSGAEWWAQVRQSGHHEE-GIHFHWDTDEVAVERHDVNVHPHLSTVTYLSDSGAPTLVLACRNSRRPSLTSAYGPIYEGALSWPKLWKHLVFDGQFLHGT------------------------------------------VP---------SVEYSKG--LRVTFLVNVWLNHRPSNCHRLPKSLSKRL 1542          
BLAST of mRNA_S-dermatodea_contig122.1374.1 vs. uniprot
Match: A0A7S1DCL0_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1DCL0_CYCTE)

HSP 1 Score: 105 bits (262), Expect = 3.590e-22
Identity = 73/218 (33.49%), Postives = 95/218 (43.58%), Query Frame = 1
Query:  370 SGAEWWVQVRQ---------------EGHHSNMGMPFHWDKDE--RLLEQSGRVVCPTVSTVTYLAGYGAPTVVLESRANG-----------NGSVVEGPLDQAFISYPVLHKHLAFDGSFLHGVP-EAMRRGDDRSQKGDERPIYHFTESWEARDKPSAQSRHKSCGVPQANDSSSRSSIERRRRGPVRVTLLVNVWLSHKPAGISPLPARIAATLS 936
            SGAEWWVQ+R                +   +  G+ FHWDKDE  R+L      V P +STVTY+ G GAPT+V+  R N             G+ +EG L     S+P   KH +FDG FLH  P + M  G+   Q                            C  P   D   R ++ RR R   RVT LVN+WL++KP  + P P  +   LS
Sbjct:   28 SGAEWWVQLRPSPPGIGRYAMHDDSPDDSMTKHGISFHWDKDEDLRILAGGSLYVHPHISTVTYITGIGAPTLVVNCRVNNVTGEWVVPDNSAGNSLEGCL-----SWPKQGKHFSFDGRFLHSAPPDFMEDGEFEEQ----------------------------CTFPSTADEKQRKTLTRRHR---RVTFLVNIWLNYKPYNVQPFPDTMVDKLS 209          
BLAST of mRNA_S-dermatodea_contig122.1374.1 vs. uniprot
Match: A0A7S2XKR3_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XKR3_9STRA)

HSP 1 Score: 105 bits (262), Expect = 2.560e-21
Identity = 93/316 (29.43%), Postives = 127/316 (40.19%), Query Frame = 1
Query:   67 LRRDAELADVPHEAETFWVPADNANPSTSLEKIALSIFDFHVKSLRRQQAPHLNEAPLDATPCTSNKASGVQPSPRPGYRRPRSSGERGNLLPSSARVGAESGAEWWVQVRQE----GHHSNM-----------GMPFHWDKDE--RLLEQSGRVVCPTVSTVTYLAGYGAPTVVLESRAN---GNGSVVEGPLD-----QAFISYPVLHKHLAFDGSFLHGVP-EAMRRGDDRSQKGDERPIYHFTESWEARDKPSAQSRHKSCGVPQANDSSSRSSIERRRRGPVRVTLLVNVWLSHKPAGISPLPARIAATLS 936
            L  D EL+D      TFW+PA    P  +LE++AL IF  HV      +    N+  L                                           SGAEWWVQ+R      G +S +           G+ FHWDKDE  RLL      V P +STVTYL G GAPT+VL  R +   G+        D     Q ++S P   KHL+FDG +LH  P + M  G    Q   + P    ++S           + + C +           + RR R   RVT LVN+WL +KP  ++  P  +   ++
Sbjct:   93 LLLDCELSDCGLLPRTFWMPATGVKPRCALEQMALEIFHQHVPD----EFLKTNDLSL-------------------------------------------SGAEWWVQLRPSPPVTGRYSMLSKDDDDEMTKTGISFHWDKDEDLRLLTGGSMYVHPHISTVTYLTGLGAPTMVLNYRVDPMTGDWLDATATADGDEVVQGYLSCPQQGKHLSFDGRYLHAAPSDLMPSGLFEEQCRIDTPSNETSDS----------DQKQQCKI-----------LGRRHR---RVTFLVNIWLHYKPFNVNMFPDTMVGNMT 337          
BLAST of mRNA_S-dermatodea_contig122.1374.1 vs. uniprot
Match: R1C727_EMIHU (Uncharacterized protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1C727_EMIHU)

HSP 1 Score: 102 bits (254), Expect = 9.390e-21
Identity = 70/200 (35.00%), Postives = 90/200 (45.00%), Query Frame = 1
Query:  361 GAESGAEWWVQVRQEGHHSNMGMPFHWDKDERLLEQSGRVVCPTVSTVTYLAGYGAPTVVLESRANGNGSVV-------EGPLDQAFISYPVLHKHLAFDGSFLHGVPEAMRRGDDRSQKGDERPIYHFTESWEARDKPSAQSRHKSCGVPQANDSSSRSSIERRRRGPVRVTLLVNVWLSHKPAGISPLPARIAATLSR 939
            G   GAE+WVQ R  G H+   + +HWDKDE LL+ SG    P VSTVTYL   GAPTVVL++R + +G ++       EG    A +SYP   + L FDG  LHG P  +                                       P+A         E R  G  R+TLLVNVW+ H+P G+   P+     L R
Sbjct:  134 GGTCGAEFWVQRRAAGEHA---INWHWDKDESLLDSSGLTAHPLVSTVTYLTSGGAPTVVLDARTDEHGRLLPPGDGSWEGGAIAATVSYPKSRRLLRFDGRLLHGCPPQL-------------------------------------AGPEA---------EPRSHGE-RLTLLVNVWVGHRPLGLPTAPSEALLRLLR 283          
BLAST of mRNA_S-dermatodea_contig122.1374.1 vs. uniprot
Match: A0A7S3BD98_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3BD98_9EUKA)

HSP 1 Score: 97.1 bits (240), Expect = 1.170e-19
Identity = 77/216 (35.65%), Postives = 95/216 (43.98%), Query Frame = 1
Query:  364 AESGAEWWVQVRQEGHHSNMGMPFHWDKDERLLEQSGRVVCPTVSTVTYLAGYGAPTVVLESRANGN-GSVVEG-----------------PLDQA-FISYPVLHKHLAFDGSFLHGVPEAMRRGDDRSQKGDERPIYHFTESWEARDKPSAQSRHKSCGVPQANDSSSRSSIERRRRGPVRVTLLVNVWLSHKPAGISPLP----ARIAATLSRG 942
            A  GAE+WVQ R  G      + FHWDKDE L E    ++ P VST+TYL   GAPTV+LE RA    G +  G                 P+  A  +SYP   K LAF G  LHGVP ++  G      GD                                     SS E       R+TLLVNVW+ H+P G+ PLP    +R+AA +SRG
Sbjct:   24 ARCGAEFWVQRRAAGED----ITFHWDKDEALREACDILIHPAVSTITYLTDGGAPTVLLEVRATAEKGQISSGAELVVGRRRKSIEPGGAPITAAAVVSYPRAGKLLAFSGGLLHGVPSSLAEGG-----GD-------------------------------------SSAE-------RLTLLVNVWVHHRPLGLCPLPRSFRSRLAA-VSRG 185          
BLAST of mRNA_S-dermatodea_contig122.1374.1 vs. uniprot
Match: B8CEN0_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CEN0_THAPS)

HSP 1 Score: 95.1 bits (235), Expect = 1.260e-17
Identity = 97/371 (26.15%), Postives = 142/371 (38.27%), Query Frame = 1
Query:    7 CFEGVIPE-QGSIGAGDLESILRRDAELADVPHEAETFWVPADNANPSTSLEKIALSIFDFHVKSLRRQQAPHLNEAPLDATPCTSNKASGVQPSPRPGYRRPRSSGERGNLLPSSARVGAESGAEWWVQVRQEGHHSNMGMPFHWDKDERLLEQSGRVVCPTVSTVTYLAGYG-----------APTVVLESRANGNGSVVEGPLDQAFISYPVLHKHLAFDGSFLHGVPE--AMRRGDDRSQKGDERPIYHFTESWEARDKPSAQSRHKSCGVPQANDSSSRSSIERRRRGPVRVTLLVNVWLSHKPAGISPLPARIAATLSR-GIDIPALS---FERPVDFYPVPIQRETPSSDEAVQREAQTSTVVI 1065
            C  G +   +  +G G  +S++R+   LA+   E  TFWVP    + S +         +   + + +Q   H+    LD          G                         A+   ++GAEWWVQV+  G  +   +  H+DKDE L E       PT+STVTYL G             APTVV     N      + P+    +S+ V  KH+ FDG  LHG P   A+RR                             S+  S     A D SS           +RVT LVN+W + KPAG+  LP  I + +   G+++   S    E P+ F P  + + T  S  A      T + ++
Sbjct:  210 CLSGDVSHGRSEVGNGLCQSLIRQAEVLAECSRE--TFWVPMGEEDHSDANGPRQWCDLEILAREIYKQ---HVKAYGLDDGIGQGKSFGG-------------------------AKTTTKAGAEWWVQVKPAGS-TRAPVDLHYDKDEALAESFSLGSFPTLSTVTYLTGETGDYTEGGRTDQAPTVVFPHTYNDEE---DQPIPMMLLSHAVRGKHIVFDGRLLHGAPGHLALRR-----------------------------SKQSSKATTGAGDDSS-----------LRVTFLVNIWKTGKPAGVHVLPNDIRSKVQAVGVEVTPSSPLLGELPIQFQPKTVLQFTAPSKLAASFSMSTGSKIV 506          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig122.1374.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KNV1_9PHAE3.450e-9847.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G6Z0_ECTSI7.420e-7152.77Putative LuxR domain protein n=1 Tax=Ectocarpus si... [more]
A0A812QHB8_9DINO1.450e-2436.46Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP... [more]
A0A813AZR0_9DINO8.160e-2336.98KCNB2 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=2... [more]
A0A1Q9EDB1_SYMMI1.420e-2236.98Uncharacterized protein n=1 Tax=Symbiodinium micro... [more]
A0A7S1DCL0_CYCTE3.590e-2233.49Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A7S2XKR3_9STRA2.560e-2129.43Hypothetical protein n=1 Tax=Attheya septentrional... [more]
R1C727_EMIHU9.390e-2135.00Uncharacterized protein n=2 Tax=Emiliania huxleyi ... [more]
A0A7S3BD98_9EUKA1.170e-1935.65Hypothetical protein (Fragment) n=1 Tax=Haptolina ... [more]
B8CEN0_THAPS1.260e-1726.15Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig122contigS-dermatodea_contig122:21406..25206 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score229.6
Seed ortholog evalue2.5e-57
Seed eggNOG ortholog2880.D7G6Z0
EggNOG OGs2E8EV@1,2SEXB@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionputative LuxR domain protein
Ec32 orthologEc-01_011710.1
Exons4
Model size1121
Cds size1119
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig122.1374.1prot_S-dermatodea_contig122.1374.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig122 21408..25206 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924236.4261484-CDS-S-dermatodea_contig122:21407..216981622924236.4261484-CDS-S-dermatodea_contig122:21407..21698Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig122 21408..21698 -
1694079114.8505304-CDS-S-dermatodea_contig122:21407..216981694079114.8505304-CDS-S-dermatodea_contig122:21407..21698Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig122 21408..21698 -
1622924236.435036-CDS-S-dermatodea_contig122:21874..221561622924236.435036-CDS-S-dermatodea_contig122:21874..22156Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig122 21875..22156 -
1694079114.8602207-CDS-S-dermatodea_contig122:21874..221561694079114.8602207-CDS-S-dermatodea_contig122:21874..22156Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig122 21875..22156 -
1622924236.446347-CDS-S-dermatodea_contig122:22667..231081622924236.446347-CDS-S-dermatodea_contig122:22667..23108Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig122 22668..23108 -
1694079114.8713262-CDS-S-dermatodea_contig122:22667..231081694079114.8713262-CDS-S-dermatodea_contig122:22667..23108Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig122 22668..23108 -
1622924236.4635074-CDS-S-dermatodea_contig122:25101..252061622924236.4635074-CDS-S-dermatodea_contig122:25101..25206Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig122 25102..25206 -
1694079114.884606-CDS-S-dermatodea_contig122:25101..252061694079114.884606-CDS-S-dermatodea_contig122:25101..25206Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig122 25102..25206 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig122.1374.1

>prot_S-dermatodea_contig122.1374.1 ID=prot_S-dermatodea_contig122.1374.1|Name=mRNA_S-dermatodea_contig122.1374.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=373bp
TSCFEGVIPEQGSIGAGDLESILRRDAELADVPHEAETFWVPADNANPST
SLEKIALSIFDFHVKSLRRQQAPHLNEAPLDATPCTSNKASGVQPSPRPG
YRRPRSSGERGNLLPSSARVGAESGAEWWVQVRQEGHHSNMGMPFHWDKD
ERLLEQSGRVVCPTVSTVTYLAGYGAPTVVLESRANGNGSVVEGPLDQAF
ISYPVLHKHLAFDGSFLHGVPEAMRRGDDRSQKGDERPIYHFTESWEARD
KPSAQSRHKSCGVPQANDSSSRSSIERRRRGPVRVTLLVNVWLSHKPAGI
SPLPARIAATLSRGIDIPALSFERPVDFYPVPIQRETPSSDEAVQREAQT
STVVIEAPLGPKSMLELMAPTSW
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mRNA from alignment at S-dermatodea_contig122:21406..25206-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig122.1374.1 ID=mRNA_S-dermatodea_contig122.1374.1|Name=mRNA_S-dermatodea_contig122.1374.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=3801bp|location=Sequence derived from alignment at S-dermatodea_contig122:21406..25206- (Saccorhiza dermatodea SderLu1190fm monoicous)
ACAAGCTGTTTCGAAGGAGTCATCCCTGAACAGGGCAGTATCGGCGCCGG TGATCTCGAGAGTATCCTGCGCCGCGACGCCGAGCTCGCCGATGTGCCTC ATGAGGTATGTGTGAAACAAGTTTTAAATGAAAGATCGTGTTGGTGCTCT CCTAGTGTACACACGCACGTAGTTCTATGAGCTGCCATCGTTCTGCGTAG ATATCAATGTGTGGATCATTGCCACGGAGCAGGCGGGCGATGAAAAATGA TTTATCTTCCCAGTTCCACACACGAAAAGCGACAGTCCCGTGTGTGTCGG GATCGACACTTGGCACCACCATAATAGTTTTATCGGTGTGGCCCCCTGTA CCTGGCGGAAGGCTGCGACTCCGTCGTACATCCATGAGCGCAGTAAGAAA AATATCCAACAAATTTGAGTCGAAGGAACATCTTGCGCGCGCATCCCGTG TTCGCGCGGCAAAACATACTTGTACCACAATGAAGGACGCGGCGTGTGTC CAATAATGTACGTGTTGTGACCATCACATACTTCATCAAAGTGAAGAAAG TAAAATATGCAAACCATGGGCCATACTGCAGTACAGCAGCAGCATACAGC AGTAGTATTATTAGTGTACTGATGCTCCTCCTATACTTGTTACTTGTAGG TTGTATGGTAGGAAACAAACTGCTGCTCCTCCTATACTTGTTACTTGTAG GTTGTATGGTAGGAAACAAATTATTACTCTTGGTTTAACCATCGGCGTGT ACAAGTAGTCTATATTGTACAGATGGGACACGCTCTGTCGTTCTCTTGGC AAGCGGCGGCGCGTTCAGATGGGCGCGGCCCAGGCTCTCTGTATGGCAGC ACCTACGTCGGCCACACAGCTTGCAGTAGAAACGGCATACTGCATATATG TACTGCTCTGCCCAGAGCTCCCCCCGTTCGCAACTTTTGAGCCTCCTGCT GACAGCAGGAGCAGCAGAACCATGTACAGCAGTATAACAGTGTATAGATA GACTACCCCACTCTTCTTCTTGTGTAAACATTTCTGTTTCGCTTCCACTC TGCCCTGGGCTTCCCCTGTGCGCAACCTTTGAGCCTCCTGCTCACAGCAG CAGTAGATCCCTATACAGTAGTCTACCTCATTCTTGGTTATCTCTGTGTC GTTTGCATTCTGCCCAGAGCTCCCCCTGTGCCTAACCTATTATGATCCTC GCGCCCATAGTAAGTAGAGCCCCGTGTAGCAATCGTCTCGCGTGTAACAC AAGCGCGAGCGCGCGCTCGCGCGCAGCCATTCCTATTCGCGCGACAAACT GAACTCATTTACTTGTAGAAAAAGAGTGGACCTCAGGGCTATGACAAAAT CAGTAATATATCCGAAATCCGAATGCCACTTTAAGGGGGTAAGGTTTGGA GCAGTTTGGCACGCTGATAACGGTTCCTGGCCGGTAGCTGTGCAGACATG CGTTGTTGCAGCGGCTGGGTATTAGAGTCAGGCACCTCTCCCAATTTCAT CGCGTAGTTTGAAGAGTTTCGGATGAGTGAACGGCCACGGTGGCCGAAAT GTACACAAACAAACAAACAAACATACACCGTGGTTTACTTGGACCCTATG CAGGATGCGGCGCAATTAAGGCCTCTTCGATAAAACGTGACCCGGTATGA AAGACGTTAACGCCTCGCTTCGCTCGGTGTTATCACCCCTACAATTAGAG CGTTGTATTTACTGCTGCTGTAGCCTGTGAGGGGATTCATGGCCAGCATC AATGTTGTGCTCGAAAAAGCATGAGTGCCATGGATGTGCGCATTGATCTG GGGCTCTGCTCTTACGCCATCAGCACTGAAACCACTCCATATATAATAGA ATACGTACACACGTCGACTTCGGATCATTTTGTCAACACCACAACCGCAC GGCACGGCGGGTTACCGTATCCGCACGGGGTGCATAGTTGGCACACGCAA TACCGTAGTTGGCTCGCTCCTTGTTTCGTACATGCCTCCATCAGGGGGCA ACACCCCTGCGATTGACTCGTAGCACTTCGCTCTCGCCTACCATACGCAT CTACGAGACTCACACACGTTCCCGTGTCTCCGATACCACCCACGCCAGGC GGAGACGTTCTGGGTGCCTGCAGACAACGCCAACCCGTCGACCTCCCTCG AGAAGATTGCCCTGTCAATTTTCGACTTCCACGTGAAGAGCCTCCGTCGG CAACAAGCCCCACACCTCAACGAAGCACCGCTGGATGCGACTCCGTGCAC GTCGAACAAAGCGAGTGGCGTCCAGCCTAGTCCCCGTCCGGGGTACAGAC GTCCCCGGAGCAGTGGCGAGCGCGGCAATCTGCTGCCGAGTAGCGCTCGT GTCGGCGCGGAATCAGGGGCGGAATGGTGGGTTCAGGTCCGACAGGAGGG GCATCACTCGAACATGGGCATGCCCTTTCACTGGGATAAAGACGAGCGTT TGCTGGAGCAAAGCGGAAGAGTCGTCTGTCCGACTGTTTCGACGGTGACG TACTTGGCCGGTTACGGCGCGCCTACCGTAGTGCTTGAGGTGAAAATCGG GTCCGTGCACAGTTACAGCAGTGGCGAATGCATCTATTAATACTTGTAGT ATTCCTGCCGGGTAGACTGCTGTAATCATGGTAGATTGGGGGGGTGTACA CACGTTCAACGTTCACCAGTTGGTTCGGCGAATTCGGCACTCTGATTGTG CCACTTGGTATGCTTTCCGCAACGGATGAACTCCTGGGATGATGTTGTTG TCCTCAAACTGCGAAGGCCTCGCCATCGCTTGCCGTGGACACTGCGAAGC GCTTGTTTCCATTTAGCGAACGTCTGATTTAATACTTGTAGTTGGGCACA GACTAACGTTGCGTGAATCGTTTTTTTGGGGTGTGCCAGTTCTCACGTAT CTATACCGGACACATGTGTACCCGTTGCGCGACGGCGACAGCGCCCTCGA CCCATAGAACCATTGCGATTCAGGAGCACAAATAGCGGCGCGAGTCAGTG CTGCCTTCGCAAATTAATGTCACCCTACCTCGCGTCGTGCCGCTTGTCAG TCCCGTGCCAATGGCAACGGGAGTGTGGTAGAAGGACCCCTCGACCAAGC TTTCATCAGCTACCCTGTCTTGCACAAGCACCTCGCTTTTGATGGAAGCT TTCTGCACGGAGTGCCAGAGGCCATGCGGAGAGGAGACGACCGAAGCCAG AAGGGCGACGAGCGACCGATTTACCACTTCACGGAGAGCTGGGAAGCTCG TGATAAGCCTTCGGCGCAATCTCGACATAAGAGCTGTGGTGTTCCGCAGG CTAACGACTCGAGTTCCAGGTCTTCAATCGAGGCAAGGACACCGTCGCCA CGTGGAGCCGCAGTTGCAATGCGGTTTCTTGACCAGACAAGTGAATTCTC GAGCGTGGAATGCCAATTGTTCGGGTTTGCGTGCTACGATTCCCTACCTT ACACTCGTGTCCCGTTCCCGTTTCTTGTTGCATTGTTGTCCGCATTTTTC ACCTTCAGCGGCGAAGAAGGGGACCGGTGCGAGTGACCCTCCTAGTCAAC GTGTGGCTGTCCCACAAACCTGCGGGAATATCGCCGCTTCCAGCAAGGAT TGCCGCCACTCTCAGTAGAGGCATCGACATCCCCGCACTTTCTTTCGAAC GGCCGGTTGATTTCTATCCCGTGCCGATCCAGCGGGAGACCCCGAGCAGC GACGAGGCGGTGCAACGGGAGGCGCAAACGTCGACGGTCGTCATAGAGGC GCCACTTGGCCCGAAGTCTATGCTCGAGCTGATGGCCCCAACATCTTGGA G
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Coding sequence (CDS) from alignment at S-dermatodea_contig122:21406..25206-

>mRNA_S-dermatodea_contig122.1374.1 ID=mRNA_S-dermatodea_contig122.1374.1|Name=mRNA_S-dermatodea_contig122.1374.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=2238bp|location=Sequence derived from alignment at S-dermatodea_contig122:21406..25206- (Saccorhiza dermatodea SderLu1190fm monoicous)
ACAAGCTGTTTCGAAGGAGTCATCCCTGAACAGGGCAGTATCGGCGCCGG
TGATCTCGAGAGTATCCTGCGCCGCGACGCCGAGCTCGCCGATGTGCCTC
ATGAGACAAGCTGTTTCGAAGGAGTCATCCCTGAACAGGGCAGTATCGGC
GCCGGTGATCTCGAGAGTATCCTGCGCCGCGACGCCGAGCTCGCCGATGT
GCCTCATGAGGCGGAGACGTTCTGGGTGCCTGCAGACAACGCCAACCCGT
CGACCTCCCTCGAGAAGATTGCCCTGTCAATTTTCGACTTCCACGTGAAG
AGCCTCCGTCGGCAACAAGCCCCACACCTCAACGAAGCACCGCTGGATGC
GACTCCGTGCACGTCGAACAAAGCGAGTGGCGTCCAGCCTAGTCCCCGTC
CGGGGTACAGACGTCCCCGGAGCAGTGGCGAGCGCGGCAATCTGCTGCCG
AGTAGCGCTCGTGTCGGCGCGGAATCAGGGGCGGAATGGTGGGTTCAGGT
CCGACAGGAGGGGCATCACTCGAACATGGGCATGCCCTTTCACTGGGATA
AAGACGAGCGTTTGCTGGAGCAAAGCGGAAGAGTCGTCTGTCCGACTGTT
TCGACGGTGACGTACTTGGCCGGTTACGGCGCGCCTACCGTAGTGCTTGA
GGCGGAGACGTTCTGGGTGCCTGCAGACAACGCCAACCCGTCGACCTCCC
TCGAGAAGATTGCCCTGTCAATTTTCGACTTCCACGTGAAGAGCCTCCGT
CGGCAACAAGCCCCACACCTCAACGAAGCACCGCTGGATGCGACTCCGTG
CACGTCGAACAAAGCGAGTGGCGTCCAGCCTAGTCCCCGTCCGGGGTACA
GACGTCCCCGGAGCAGTGGCGAGCGCGGCAATCTGCTGCCGAGTAGCGCT
CGTGTCGGCGCGGAATCAGGGGCGGAATGGTGGGTTCAGGTCCGACAGGA
GGGGCATCACTCGAACATGGGCATGCCCTTTCACTGGGATAAAGACGAGC
GTTTGCTGGAGCAAAGCGGAAGAGTCGTCTGTCCGACTGTTTCGACGGTG
ACGTACTTGGCCGGTTACGGCGCGCCTACCGTAGTGCTTGAGTCCCGTGC
CAATGGCAACGGGAGTGTGGTAGAAGGACCCCTCGACCAAGCTTTCATCA
GCTACCCTGTCTTGCACAAGCACCTCGCTTTTGATGGAAGCTTTCTGCAC
GGAGTGCCAGAGGCCATGCGGAGAGGAGACGACCGAAGCCAGAAGGGCGA
CGAGCGACCGATTTACCACTTCACGGAGAGCTGGGAAGCTCGTGATAAGC
CTTCGGCGCAATCTCGACATAAGAGCTGTGGTGTTCCGCAGGCTAACGAC
TCGAGTTCCAGGTCTTCAATCGAGTCCCGTGCCAATGGCAACGGGAGTGT
GGTAGAAGGACCCCTCGACCAAGCTTTCATCAGCTACCCTGTCTTGCACA
AGCACCTCGCTTTTGATGGAAGCTTTCTGCACGGAGTGCCAGAGGCCATG
CGGAGAGGAGACGACCGAAGCCAGAAGGGCGACGAGCGACCGATTTACCA
CTTCACGGAGAGCTGGGAAGCTCGTGATAAGCCTTCGGCGCAATCTCGAC
ATAAGAGCTGTGGTGTTCCGCAGGCTAACGACTCGAGTTCCAGGTCTTCA
ATCGAGCGGCGAAGAAGGGGACCGGTGCGAGTGACCCTCCTAGTCAACGT
GTGGCTGTCCCACAAACCTGCGGGAATATCGCCGCTTCCAGCAAGGATTG
CCGCCACTCTCAGTAGAGGCATCGACATCCCCGCACTTTCTTTCGAACGG
CCGGTTGATTTCTATCCCGTGCCGATCCAGCGGGAGACCCCGAGCAGCGA
CGAGGCGGTGCAACGGGAGGCGCAAACGTCGACGGTCGTCATAGAGGCGC
CACTTGGCCCGAAGTCTATGCTCGAGCTGATGGCCCCAACATCTTGGCGG
CGAAGAAGGGGACCGGTGCGAGTGACCCTCCTAGTCAACGTGTGGCTGTC
CCACAAACCTGCGGGAATATCGCCGCTTCCAGCAAGGATTGCCGCCACTC
TCAGTAGAGGCATCGACATCCCCGCACTTTCTTTCGAACGGCCGGTTGAT
TTCTATCCCGTGCCGATCCAGCGGGAGACCCCGAGCAGCGACGAGGCGGT
GCAACGGGAGGCGCAAACGTCGACGGTCGTCATAGAGGCGCCACTTGGCC
CGAAGTCTATGCTCGAGCTGATGGCCCCAACATCTTGG
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