mRNA_S-dermatodea_contig122.1374.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
|
Overview
Homology
BLAST of mRNA_S-dermatodea_contig122.1374.1 vs. uniprot
Match: A0A6H5KNV1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNV1_9PHAE) HSP 1 Score: 306 bits (783), Expect = 3.450e-98 Identity = 180/378 (47.62%), Postives = 235/378 (62.17%), Query Frame = 1
Query: 4 SCFEGVIPEQGSIGAGDLESILRRDAELADVPHEAETFWVPADNANPSTSLEKIALSIFDFHVKSLRRQQAPHLNEA---PLDATPCTSNKASGVQPSPRPGYRRPRSSGERGNLLPSSARVGAESGAEWWVQVRQEGHHSNMGMPFHWDKDERLLEQSGRVVCPTVSTVTYLAGYGAPTVVLESRANGNGSVVEGPLDQAFISYPVLHKHLAFDGSFLHGVPEAMRRGDDRSQKGDERPIYHFTESWEARDKPSAQSRHKSCGVPQANDSSSRSSIERRRRGPVRVTLLVNVWLSHKPAGISPLPARIAATLSRGIDIPALSFERPVDFYPVPIQRET---PSSDE--AVQREAQTSTVVIEAPLGPKSMLELMAPT 1113
SC+E V+ L+ L RD EL D PHEA+TFW+PAD A P+TSLE+IA +I+DFHV + + H + A P+ +TP + + +PG R +S G G ESGAEWWVQ R+EG H+++GMPFHWDKDE +LEQ G VVCP+VSTVTYL GYGAPTVVLE+RA G+G+V EG ++Q F+SYP L KHLAFDG FLHGVPE + R D+ G E+ D +SR +P +N + RRR+G +RVT LVNVWLSHKP GI+ LPA +A +LS I +P L F+RP DF PVP+++E PS +E R + S++++ PLGP +LE+ APT
Sbjct: 3 SCYERVM-------GMTLQDALLRDVELIDNPHEAKTFWLPAD-ACPATSLERIAKAIYDFHVANKQHTHG-HQDSALTGPVGSTPSAVAHSGNIPSRDKPGVVRRDASSHTG---------GVESGAEWWVQQREEGRHASVGMPFHWDKDEEMLEQEGLVVCPSVSTVTYLTGYGAPTVVLEARATGSGTVQEGDINQTFVSYPALFKHLAFDGGFLHGVPEQLMRTGDQRVSGKVGRDGGRREARGGNDNHGIRSR---TSLPSSNGT-------RRRQGRMRVTFLVNVWLSHKPKGITSLPADVAGSLSN-ISVP-LCFDRPGDFVPVPVEKEQETQPSQEEDGGSIRGTKPSSMLLNVPLGPTLLLEVRAPT 350
BLAST of mRNA_S-dermatodea_contig122.1374.1 vs. uniprot
Match: D7G6Z0_ECTSI (Putative LuxR domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6Z0_ECTSI) HSP 1 Score: 231 bits (589), Expect = 7.420e-71 Identity = 124/235 (52.77%), Postives = 154/235 (65.53%), Query Frame = 1
Query: 4 SCFEGVIPEQGSIGAGDLESILRRDAELADVPHEAETFWVPADNANPSTSLEKIALSIFDFHVKSLRR-QQAPHLNEAPLDATPCTSNKASGVQPSPRPGYRRPRSSGERGNLLPSSARVGA-ESGAEWWVQVRQEGHHSNMGMPFHWDKDERLLEQSGRVVCPTVSTVTYLAGYGAPTVVLESRANGNGSVVEGPLDQAFISYPVLHKHLAFDGSFLHGVPEAMRRGDDRSQKG 702
SC+E V+ G +++LR D EL D PHEA+TFW+PAD A P+TSLEKIA +IFDFHV + + Q P+ +TP + +PG R +S+R G ESGAEWWVQ R+EG H+++GMPFHWDKDE++LEQ G VVCP VSTVTYL GYGAPTVVLE+RA G+ +V EG ++Q F+SYP L KHLAFDG FLHGVPE + R DR G
Sbjct: 3 SCYERVL------GTTRQDALLR-DVELIDNPHEAKTFWLPAD-ACPATSLEKIAKAIFDFHVANKQHIGQQDSAPTGPVGSTPSAVAHGENIPCRDKPGVVR----------RDTSSRTGCVESGAEWWVQQREEGRHASLGMPFHWDKDEQMLEQEGLVVCPAVSTVTYLTGYGAPTVVLEARATGSRTVEEGDINQTFVSYPALFKHLAFDGGFLHGVPEQLMRTGDRRISG 219
BLAST of mRNA_S-dermatodea_contig122.1374.1 vs. uniprot
Match: A0A812QHB8_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP2456 TaxID=1519616 RepID=A0A812QHB8_9DINO) HSP 1 Score: 116 bits (290), Expect = 1.450e-24 Identity = 70/192 (36.46%), Postives = 90/192 (46.88%), Query Frame = 1
Query: 364 AESGAEWWVQVRQEGHHSNMGMPFHWDKDERLLEQSGRVVCPTVSTVTYLAGYGAPTVVLESRANGNGSVVE--GPLDQAFISYPVLHKHLAFDGSFLHGVPEAMRRGDDRSQKGDERPIYHFTESWEARDKPSAQSRHKSCGVPQANDSSSRSSIERRRRGPVRVTLLVNVWLSHKPAGISPLPARIAATL 933
A SGAEWW QVRQ GHH G+ FHWD DE +E+ V P +STVTYL+ GAPT+VL R + S+ GP+ + +S+P L KHL FDG FLHG ++ G D GP RVT LVN+WL+H+P+ LP ++ L
Sbjct: 803 ARSGAEWWAQVRQSGHHEE-GIQFHWDTDEVAVERHDVNVHPHLSTVTYLSESGAPTLVLACRNSRRPSLTSAYGPIHEGALSWPKLWKHLVFDGQFLHGTVPSLEYGKD---------------------------------------------------GP-RVTFLVNIWLNHRPSNCHRLPKSLSKRL 941
BLAST of mRNA_S-dermatodea_contig122.1374.1 vs. uniprot
Match: A0A813AZR0_9DINO (KCNB2 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813AZR0_9DINO) HSP 1 Score: 110 bits (275), Expect = 8.160e-23 Identity = 71/192 (36.98%), Postives = 91/192 (47.40%), Query Frame = 1
Query: 364 AESGAEWWVQVRQEGHHSNMGMPFHWDKDERLLEQSGRVVCPTVSTVTYLAGYGAPTVVLESRANGNGSVVE--GPLDQAFISYPVLHKHLAFDGSFLHGVPEAMRRGDDRSQKGDERPIYHFTESWEARDKPSAQSRHKSCGVPQANDSSSRSSIERRRRGPVRVTLLVNVWLSHKPAGISPLPARIAATL 933
A SGAEWW QVRQ GHH G+ FHWD DE +E+ V P +STVTYL+ GAPT+VL R + S+ GP+ + +S+P L KHL FDG FLHG VP S+E + +RVT LVNVWL+H+P+ LP ++ L
Sbjct: 175 ARSGAEWWAQVRQSGHHEE-GIHFHWDTDEVAVERHDVNVHPHLSTVTYLSDSGAPTLVLACRNSRRPSLTSAYGPIYEGALSWPKLWKHLVFDGQFLHGT------------------------------------------VP---------SVEYSKG--LRVTFLVNVWLNHRPSNCHRLPKSLSKRL 312
BLAST of mRNA_S-dermatodea_contig122.1374.1 vs. uniprot
Match: A0A1Q9EDB1_SYMMI (Uncharacterized protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A1Q9EDB1_SYMMI) HSP 1 Score: 110 bits (275), Expect = 1.420e-22 Identity = 71/192 (36.98%), Postives = 91/192 (47.40%), Query Frame = 1
Query: 364 AESGAEWWVQVRQEGHHSNMGMPFHWDKDERLLEQSGRVVCPTVSTVTYLAGYGAPTVVLESRANGNGSVVE--GPLDQAFISYPVLHKHLAFDGSFLHGVPEAMRRGDDRSQKGDERPIYHFTESWEARDKPSAQSRHKSCGVPQANDSSSRSSIERRRRGPVRVTLLVNVWLSHKPAGISPLPARIAATL 933
A SGAEWW QVRQ GHH G+ FHWD DE +E+ V P +STVTYL+ GAPT+VL R + S+ GP+ + +S+P L KHL FDG FLHG VP S+E + +RVT LVNVWL+H+P+ LP ++ L
Sbjct: 1405 ARSGAEWWAQVRQSGHHEE-GIHFHWDTDEVAVERHDVNVHPHLSTVTYLSDSGAPTLVLACRNSRRPSLTSAYGPIYEGALSWPKLWKHLVFDGQFLHGT------------------------------------------VP---------SVEYSKG--LRVTFLVNVWLNHRPSNCHRLPKSLSKRL 1542
BLAST of mRNA_S-dermatodea_contig122.1374.1 vs. uniprot
Match: A0A7S1DCL0_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1DCL0_CYCTE) HSP 1 Score: 105 bits (262), Expect = 3.590e-22 Identity = 73/218 (33.49%), Postives = 95/218 (43.58%), Query Frame = 1
Query: 370 SGAEWWVQVRQ---------------EGHHSNMGMPFHWDKDE--RLLEQSGRVVCPTVSTVTYLAGYGAPTVVLESRANG-----------NGSVVEGPLDQAFISYPVLHKHLAFDGSFLHGVP-EAMRRGDDRSQKGDERPIYHFTESWEARDKPSAQSRHKSCGVPQANDSSSRSSIERRRRGPVRVTLLVNVWLSHKPAGISPLPARIAATLS 936
SGAEWWVQ+R + + G+ FHWDKDE R+L V P +STVTY+ G GAPT+V+ R N G+ +EG L S+P KH +FDG FLH P + M G+ Q C P D R ++ RR R RVT LVN+WL++KP + P P + LS
Sbjct: 28 SGAEWWVQLRPSPPGIGRYAMHDDSPDDSMTKHGISFHWDKDEDLRILAGGSLYVHPHISTVTYITGIGAPTLVVNCRVNNVTGEWVVPDNSAGNSLEGCL-----SWPKQGKHFSFDGRFLHSAPPDFMEDGEFEEQ----------------------------CTFPSTADEKQRKTLTRRHR---RVTFLVNIWLNYKPYNVQPFPDTMVDKLS 209
BLAST of mRNA_S-dermatodea_contig122.1374.1 vs. uniprot
Match: A0A7S2XKR3_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XKR3_9STRA) HSP 1 Score: 105 bits (262), Expect = 2.560e-21 Identity = 93/316 (29.43%), Postives = 127/316 (40.19%), Query Frame = 1
Query: 67 LRRDAELADVPHEAETFWVPADNANPSTSLEKIALSIFDFHVKSLRRQQAPHLNEAPLDATPCTSNKASGVQPSPRPGYRRPRSSGERGNLLPSSARVGAESGAEWWVQVRQE----GHHSNM-----------GMPFHWDKDE--RLLEQSGRVVCPTVSTVTYLAGYGAPTVVLESRAN---GNGSVVEGPLD-----QAFISYPVLHKHLAFDGSFLHGVP-EAMRRGDDRSQKGDERPIYHFTESWEARDKPSAQSRHKSCGVPQANDSSSRSSIERRRRGPVRVTLLVNVWLSHKPAGISPLPARIAATLS 936
L D EL+D TFW+PA P +LE++AL IF HV + N+ L SGAEWWVQ+R G +S + G+ FHWDKDE RLL V P +STVTYL G GAPT+VL R + G+ D Q ++S P KHL+FDG +LH P + M G Q + P ++S + + C + + RR R RVT LVN+WL +KP ++ P + ++
Sbjct: 93 LLLDCELSDCGLLPRTFWMPATGVKPRCALEQMALEIFHQHVPD----EFLKTNDLSL-------------------------------------------SGAEWWVQLRPSPPVTGRYSMLSKDDDDEMTKTGISFHWDKDEDLRLLTGGSMYVHPHISTVTYLTGLGAPTMVLNYRVDPMTGDWLDATATADGDEVVQGYLSCPQQGKHLSFDGRYLHAAPSDLMPSGLFEEQCRIDTPSNETSDS----------DQKQQCKI-----------LGRRHR---RVTFLVNIWLHYKPFNVNMFPDTMVGNMT 337
BLAST of mRNA_S-dermatodea_contig122.1374.1 vs. uniprot
Match: R1C727_EMIHU (Uncharacterized protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1C727_EMIHU) HSP 1 Score: 102 bits (254), Expect = 9.390e-21 Identity = 70/200 (35.00%), Postives = 90/200 (45.00%), Query Frame = 1
Query: 361 GAESGAEWWVQVRQEGHHSNMGMPFHWDKDERLLEQSGRVVCPTVSTVTYLAGYGAPTVVLESRANGNGSVV-------EGPLDQAFISYPVLHKHLAFDGSFLHGVPEAMRRGDDRSQKGDERPIYHFTESWEARDKPSAQSRHKSCGVPQANDSSSRSSIERRRRGPVRVTLLVNVWLSHKPAGISPLPARIAATLSR 939
G GAE+WVQ R G H+ + +HWDKDE LL+ SG P VSTVTYL GAPTVVL++R + +G ++ EG A +SYP + L FDG LHG P + P+A E R G R+TLLVNVW+ H+P G+ P+ L R
Sbjct: 134 GGTCGAEFWVQRRAAGEHA---INWHWDKDESLLDSSGLTAHPLVSTVTYLTSGGAPTVVLDARTDEHGRLLPPGDGSWEGGAIAATVSYPKSRRLLRFDGRLLHGCPPQL-------------------------------------AGPEA---------EPRSHGE-RLTLLVNVWVGHRPLGLPTAPSEALLRLLR 283
BLAST of mRNA_S-dermatodea_contig122.1374.1 vs. uniprot
Match: A0A7S3BD98_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3BD98_9EUKA) HSP 1 Score: 97.1 bits (240), Expect = 1.170e-19 Identity = 77/216 (35.65%), Postives = 95/216 (43.98%), Query Frame = 1
Query: 364 AESGAEWWVQVRQEGHHSNMGMPFHWDKDERLLEQSGRVVCPTVSTVTYLAGYGAPTVVLESRANGN-GSVVEG-----------------PLDQA-FISYPVLHKHLAFDGSFLHGVPEAMRRGDDRSQKGDERPIYHFTESWEARDKPSAQSRHKSCGVPQANDSSSRSSIERRRRGPVRVTLLVNVWLSHKPAGISPLP----ARIAATLSRG 942
A GAE+WVQ R G + FHWDKDE L E ++ P VST+TYL GAPTV+LE RA G + G P+ A +SYP K LAF G LHGVP ++ G GD SS E R+TLLVNVW+ H+P G+ PLP +R+AA +SRG
Sbjct: 24 ARCGAEFWVQRRAAGED----ITFHWDKDEALREACDILIHPAVSTITYLTDGGAPTVLLEVRATAEKGQISSGAELVVGRRRKSIEPGGAPITAAAVVSYPRAGKLLAFSGGLLHGVPSSLAEGG-----GD-------------------------------------SSAE-------RLTLLVNVWVHHRPLGLCPLPRSFRSRLAA-VSRG 185
BLAST of mRNA_S-dermatodea_contig122.1374.1 vs. uniprot
Match: B8CEN0_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CEN0_THAPS) HSP 1 Score: 95.1 bits (235), Expect = 1.260e-17 Identity = 97/371 (26.15%), Postives = 142/371 (38.27%), Query Frame = 1
Query: 7 CFEGVIPE-QGSIGAGDLESILRRDAELADVPHEAETFWVPADNANPSTSLEKIALSIFDFHVKSLRRQQAPHLNEAPLDATPCTSNKASGVQPSPRPGYRRPRSSGERGNLLPSSARVGAESGAEWWVQVRQEGHHSNMGMPFHWDKDERLLEQSGRVVCPTVSTVTYLAGYG-----------APTVVLESRANGNGSVVEGPLDQAFISYPVLHKHLAFDGSFLHGVPE--AMRRGDDRSQKGDERPIYHFTESWEARDKPSAQSRHKSCGVPQANDSSSRSSIERRRRGPVRVTLLVNVWLSHKPAGISPLPARIAATLSR-GIDIPALS---FERPVDFYPVPIQRETPSSDEAVQREAQTSTVVI 1065
C G + + +G G +S++R+ LA+ E TFWVP + S + + + + +Q H+ LD G A+ ++GAEWWVQV+ G + + H+DKDE L E PT+STVTYL G APTVV N + P+ +S+ V KH+ FDG LHG P A+RR S+ S A D SS +RVT LVN+W + KPAG+ LP I + + G+++ S E P+ F P + + T S A T + ++
Sbjct: 210 CLSGDVSHGRSEVGNGLCQSLIRQAEVLAECSRE--TFWVPMGEEDHSDANGPRQWCDLEILAREIYKQ---HVKAYGLDDGIGQGKSFGG-------------------------AKTTTKAGAEWWVQVKPAGS-TRAPVDLHYDKDEALAESFSLGSFPTLSTVTYLTGETGDYTEGGRTDQAPTVVFPHTYNDEE---DQPIPMMLLSHAVRGKHIVFDGRLLHGAPGHLALRR-----------------------------SKQSSKATTGAGDDSS-----------LRVTFLVNIWKTGKPAGVHVLPNDIRSKVQAVGVEVTPSSPLLGELPIQFQPKTVLQFTAPSKLAASFSMSTGSKIV 506 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig122.1374.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig122.1374.1 >prot_S-dermatodea_contig122.1374.1 ID=prot_S-dermatodea_contig122.1374.1|Name=mRNA_S-dermatodea_contig122.1374.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=373bp TSCFEGVIPEQGSIGAGDLESILRRDAELADVPHEAETFWVPADNANPSTback to top mRNA from alignment at S-dermatodea_contig122:21406..25206- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig122.1374.1 ID=mRNA_S-dermatodea_contig122.1374.1|Name=mRNA_S-dermatodea_contig122.1374.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=3801bp|location=Sequence derived from alignment at S-dermatodea_contig122:21406..25206- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig122:21406..25206- >mRNA_S-dermatodea_contig122.1374.1 ID=mRNA_S-dermatodea_contig122.1374.1|Name=mRNA_S-dermatodea_contig122.1374.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=2238bp|location=Sequence derived from alignment at S-dermatodea_contig122:21406..25206- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |