mRNA_S-dermatodea_contig1210.1311.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
|
Overview
Homology
BLAST of mRNA_S-dermatodea_contig1210.1311.1 vs. uniprot
Match: D7G9D1_ECTSI (ARL2_Bind_BART domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9D1_ECTSI) HSP 1 Score: 134 bits (336), Expect = 7.930e-38 Identity = 65/88 (73.86%), Postives = 74/88 (84.09%), Query Frame = 1
Query: 19 KPGKHVDEWGASEWEEKTPEESKREAGLEELVKKVSTFFYEDESFVNVFEGFVSDNAHKIDLGTEEMKLEYTDIYEDYQSLFQREIEG 282
KPGK DEWG S WEEKTPEESKRE GLE+LVKKVS+ FYE E F+ VFE FV NAHKIDL EEMKLEYTD+Y+DYQ+LF+++IEG
Sbjct: 2 KPGKEPDEWGGSVWEEKTPEESKREDGLEDLVKKVSSLFYESEDFIKVFEDFVETNAHKIDLDVEEMKLEYTDLYDDYQALFEKKIEG 89
BLAST of mRNA_S-dermatodea_contig1210.1311.1 vs. uniprot
Match: A0A6V1QFZ2_HETAK (Cilia- and flagella-associated protein 36 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1QFZ2_HETAK) HSP 1 Score: 126 bits (317), Expect = 2.380e-34 Identity = 60/111 (54.05%), Postives = 82/111 (73.87%), Query Frame = 1
Query: 109 LVKKVSTFFYEDESFVNVFEGFVSDNAHKIDLGTEEMKLEYTDIYEDYQSLFQREIEGFIEAQGYTAVDFYERVRQAQDVDPWSHEAVFAKIMIATADFDIFMCMMREAAE 441
+V+KV FFYED+ F VFE FV +NAH IDL ++E KLEYTD+Y +YQ LF+ ++EGFIE+QG + ++FY VR+A + DP S AV +IM +T DFD+F+ MM+E E
Sbjct: 31 IVEKVQEFFYEDDEFAAVFEKFVEENAHTIDLDSDENKLEYTDLYNEYQKLFESQLEGFIESQGSSVLEFYSEVRKANEEDPDSATAVLGRIMASTCDFDVFLYMMKEEKE 141
BLAST of mRNA_S-dermatodea_contig1210.1311.1 vs. uniprot
Match: A0A7S2V171_9STRA (Cilia- and flagella-associated protein 36 n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V171_9STRA) HSP 1 Score: 117 bits (294), Expect = 6.540e-31 Identity = 60/140 (42.86%), Postives = 98/140 (70.00%), Query Frame = 1
Query: 28 KHVDEWGASEWEEKTPEES--KREAGLEELVKKVSTFFYEDESFVNVFEGFVSDNAHKIDLGTEEMKLEYTDIYEDYQSLFQREIEGFIEAQGYTAVDFYERVRQAQDVDPWSHEAVFAKIMIATADFDIFMCMMREAAE 441
K DE+ ++ E KT +S +++ +V+KV +FYED+ F +FE FV+++AH +DL TEE +LEYT++Y+ +Q+L+++ +E FI QG + ++FY+++++A D D S A+F +I+ AT DFDIFM MM+EA E
Sbjct: 6 KEDDEFVDAKSESKTGAKSIGAKDSDSRPIVEKVQQYFYEDDDFAKIFEDFVAEHAHIVDLDTEENRLEYTELYQQFQALYEKHLEAFIVEQGSSVMEFYQQLKKATDEDQTSAIALFGQILTATCDFDIFMLMMKEARE 145
BLAST of mRNA_S-dermatodea_contig1210.1311.1 vs. uniprot
Match: A0A3F2RJK5_9STRA (Cilia- and flagella-associated protein 36 n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RJK5_9STRA) HSP 1 Score: 117 bits (293), Expect = 1.540e-30 Identity = 55/112 (49.11%), Postives = 82/112 (73.21%), Query Frame = 1
Query: 106 ELVKKVSTFFYEDESFVNVFEGFVSDNAHKIDLGTEEMKLEYTDIYEDYQSLFQREIEGFIEAQGYTAVDFYERVRQAQDVDPWSHEAVFAKIMIATADFDIFMCMMREAAE 441
+LV KV T+F++++ F + FE F +N H DL +EEMKLEYTDIY ++ +LF+R++EG+I++QG T +FYE VRQA D S + ++I++ATADFD+F+ MMR+ E
Sbjct: 53 DLVNKVITYFFDNDEFAHTFETFAEENCHAFDLDSEEMKLEYTDIYNEFLALFERKLEGYIKSQGSTVHEFYELVRQAYQTDRESGTVLCSEILVATADFDVFVLMMRQTKE 164
BLAST of mRNA_S-dermatodea_contig1210.1311.1 vs. uniprot
Match: A0A2P4Y0G2_9STRA (Cilia- and flagella-associated protein 36 n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y0G2_9STRA) HSP 1 Score: 114 bits (286), Expect = 1.560e-29 Identity = 62/152 (40.79%), Postives = 94/152 (61.84%), Query Frame = 1
Query: 37 DEWGASEWEEKTPEESKREAGLE----------------ELVKKVSTFFYEDESFVNVFEGFVSDNAHKIDLGTEEMKLEYTDIYEDYQSLFQREIEGFIEAQGYTAVDFYERVRQAQDVDPWSHEAVFAKIMIATADFDIFMCMMREAAEA 444
DE A + P E+K AGLE +LV KV +FF++++ F + FE F + H DL ++EMKLEYTDIY ++ +LF++++E FI +QG T +FYE VR+A ++D S + ++I++ATADFD+F+ MMR+ EA
Sbjct: 10 DEKAAEKHHAGEPSEAKVHAGLEKAGAKDDPNNFDPENNDLVNKVISFFFDNDEFAHTFEAFAEHHCHAFDLDSDEMKLEYTDIYNEFLALFEQKLEAFIRSQGATVQEFYELVRRAYEIDRQSGTVLCSEILVATADFDVFVLMMRQTKEA 161
BLAST of mRNA_S-dermatodea_contig1210.1311.1 vs. uniprot
Match: A0A225W6K4_9STRA (Cilia- and flagella-associated protein 36 n=2 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225W6K4_9STRA) HSP 1 Score: 112 bits (281), Expect = 9.890e-29 Identity = 54/114 (47.37%), Postives = 83/114 (72.81%), Query Frame = 1
Query: 103 EELVKKVSTFFYEDESFVNVFEGFVSDNAHKIDLGTEEMKLEYTDIYEDYQSLFQREIEGFIEAQGYTAVDFYERVRQAQDVDPWSHEAVFAKIMIATADFDIFMCMMREAAEA 444
++LV KV +FF++++ F + FE F + H DL +EEMKLEYTDIY ++ +LF++++E FI +QG T +FYE VR+A +VD S + ++I++ATADFD+F+ MMR+ EA
Sbjct: 52 DDLVNKVISFFFDNDEFAHTFETFAEHHCHAFDLDSEEMKLEYTDIYNEFLALFEQKLEAFILSQGATVQEFYELVRKAYEVDRESGTVLCSEILVATADFDVFVLMMRQTKEA 165
BLAST of mRNA_S-dermatodea_contig1210.1311.1 vs. uniprot
Match: H3GGW1_PHYRM (Cilia- and flagella-associated protein 36 n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GGW1_PHYRM) HSP 1 Score: 110 bits (274), Expect = 1.120e-27 Identity = 66/165 (40.00%), Postives = 99/165 (60.00%), Query Frame = 1
Query: 1 MPGREQKPGKHV-DEWGASEWEEKTPEESKREAGLE-----------------ELVKKVSTFFYEDESFVNVFEGFVSDNAHKIDLGTEEMKLEYTDIYEDYQSLFQREIEGFIEAQGYTAVDFYERVRQAQDVDPWSHEAVFAKIMIATADFDIFMCMMREAAE 441
MP RE KP V DE + + P ESK AG E +LV KV +FF++++ F + FE F + H DL ++EMKLEYTDIY ++ +LF+ ++E +I++QG T +FY+ VR+A +VD S + ++I++ATADFD+F+ MMR+ E
Sbjct: 1 MP-RESKPSADVKDEKPSEKNRADAPSESKPRAGHEKASAKDDDGSSFDPGSSDLVDKVISFFFDNDEFAHTFEAFAEIHCHAFDLDSDEMKLEYTDIYNEFLALFEEKLEAYIQSQGATVHEFYDLVRRAYEVDRQSGTVLCSEILVATADFDVFVLMMRQTKE 164
BLAST of mRNA_S-dermatodea_contig1210.1311.1 vs. uniprot
Match: G4ZTS8_PHYSP (Cilia- and flagella-associated protein 36 n=3 Tax=Phytophthora TaxID=4783 RepID=G4ZTS8_PHYSP) HSP 1 Score: 109 bits (273), Expect = 1.380e-27 Identity = 51/113 (45.13%), Postives = 81/113 (71.68%), Query Frame = 1
Query: 106 ELVKKVSTFFYEDESFVNVFEGFVSDNAHKIDLGTEEMKLEYTDIYEDYQSLFQREIEGFIEAQGYTAVDFYERVRQAQDVDPWSHEAVFAKIMIATADFDIFMCMMREAAEA 444
+LV KV +FF++++ F + FE F + H DL ++EMKLEYTDIY ++ +LF+ ++E +I +QG T +FYE VR+A ++D S + ++I++ATADFD+F+ MMR+ EA
Sbjct: 48 DLVNKVISFFFDNDEFAHTFETFAETHCHAFDLDSDEMKLEYTDIYNEFLALFEEKLEAYIRSQGATVHEFYELVRRAYELDRQSGTVLCSEILVATADFDVFVLMMRQTKEA 160
BLAST of mRNA_S-dermatodea_contig1210.1311.1 vs. uniprot
Match: A0A8K1CSW5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CSW5_PYTOL) HSP 1 Score: 108 bits (270), Expect = 4.850e-27 Identity = 50/113 (44.25%), Postives = 80/113 (70.80%), Query Frame = 1
Query: 109 LVKKVSTFFYEDESFVNVFEGFVSDNAHKIDLGTEEMKLEYTDIYEDYQSLFQREIEGFIEAQGYTAVDFYERVRQAQDVDPWSHEAVFAKIMIATADFDIFMCMMREAAEAL 447
L+KKV +F++D++F + FE F ++ H DL EEMKLEYT+IY +Q+LF+ ++E FI AQG + +FY+ +R A + D S + ++I++ATADFD+F+ MMR+ E++
Sbjct: 56 LIKKVIAYFFDDDAFAHTFEKFAEEHCHIFDLEEEEMKLEYTEIYNQFQALFESKLEAFIRAQGSSVGEFYQYIRDANERDRESSLVLCSEILVATADFDVFVLMMRQTKESM 168
BLAST of mRNA_S-dermatodea_contig1210.1311.1 vs. uniprot
Match: A0A662YCQ8_9STRA (Cilia- and flagella-associated protein 36 n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YCQ8_9STRA) HSP 1 Score: 107 bits (267), Expect = 1.200e-26 Identity = 51/113 (45.13%), Postives = 78/113 (69.03%), Query Frame = 1
Query: 106 ELVKKVSTFFYEDESFVNVFEGFVSDNAHKIDLGTEEMKLEYTDIYEDYQSLFQREIEGFIEAQGYTAVDFYERVRQAQDVDPWSHEAVFAKIMIATADFDIFMCMMREAAEA 444
ELV KV FF++D+ F FE F + H D+ ++EMKLEYTDIY + +LF+ ++E +I +QG T +FYE VR+A ++D S + ++I++ATADFD+F+ MMR+ E+
Sbjct: 51 ELVNKVIAFFFDDDEFARTFETFAELHCHAFDVNSDEMKLEYTDIYNKFLALFEEKLEAYIRSQGATVHEFYELVRRAYEMDRESGTVLCSEILVATADFDVFVLMMRQTKES 163 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1210.1311.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig1210.1311.1 >prot_S-dermatodea_contig1210.1311.1 ID=prot_S-dermatodea_contig1210.1311.1|Name=mRNA_S-dermatodea_contig1210.1311.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=152bp MPGREQKPGKHVDEWGASEWEEKTPEESKREAGLEELVKKVSTFFYEDESback to top mRNA from alignment at S-dermatodea_contig1210:18532..20142- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig1210.1311.1 ID=mRNA_S-dermatodea_contig1210.1311.1|Name=mRNA_S-dermatodea_contig1210.1311.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=1611bp|location=Sequence derived from alignment at S-dermatodea_contig1210:18532..20142- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig1210:18532..20142- >mRNA_S-dermatodea_contig1210.1311.1 ID=mRNA_S-dermatodea_contig1210.1311.1|Name=mRNA_S-dermatodea_contig1210.1311.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=912bp|location=Sequence derived from alignment at S-dermatodea_contig1210:18532..20142- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |