mRNA_S-dermatodea_contig12057.1279.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig12057.1279.1
Unique NamemRNA_S-dermatodea_contig12057.1279.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
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BLAST of mRNA_S-dermatodea_contig12057.1279.1 vs. uniprot
Match: D7FZ64_ECTSI (Long chain acyl-CoA synthetase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ64_ECTSI)

HSP 1 Score: 469 bits (1208), Expect = 1.550e-159
Identity = 220/273 (80.59%), Postives = 249/273 (91.21%), Query Frame = 1 
Query:    4 ASWQALPDMWDYLAAECGDNTAVIDPINPPDTVDGTRPPKGSETRLTYSEMRASVGKMAAALMALGVQKGDCVSVFSENSHRWLIAEQGIMRAGGCNAVRGATAPAPELRYIYADSESMGAVVETPKLLELLMEKDGEGLVGEDGALPRFLMVLYPKGKSGVELQESLNVPESVKVVTFSECLEGGGVFDASPAVDRSMKATLVYTSGTTGKPKGAILTHGNLLHQVAENSFDRSEGSPLNPWVGDVFVSILPCWHIFERTAEYFTLTRGATM 822
            ASW +LP+MWD+LA ECGD TA++DP++PPD  DG RPPKGSETRLTYSEMR S+G MAAAL+ LG++K DCVSVFSENS+RWLIAEQGIM+AGGCNAVRGATAP  ELRYIY DSES+GAVVETPKLL+LL+E+ G+GL G DGA PRFLMVL+P GK+G ELQESLN+PES+KVVTFSECL+ GGV DA+P V+RSMKATLVYTSGTTGKPKGA+LTH NLLHQV++NSFDRSEGSP+NPWVGDVFVSILPCWHIFERTAEYFTLTRG TM
Sbjct:   47 ASWNSLPEMWDFLAGECGDLTAIVDPVHPPDMPDGKRPPKGSETRLTYSEMRTSIGSMAAALIGLGLEKQDCVSVFSENSYRWLIAEQGIMKAGGCNAVRGATAPVAELRYIYGDSESVGAVVETPKLLKLLVEEGGKGLEGADGAEPRFLMVLFPGGKNGKELQESLNIPESIKVVTFSECLDKGGVLDAAPVVERSMKATLVYTSGTTGKPKGAVLTHANLLHQVSQNSFDRSEGSPMNPWVGDVFVSILPCWHIFERTAEYFTLTRGVTM 319
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BLAST of mRNA_S-dermatodea_contig12057.1279.1 vs. uniprot
Match: A0A836C922_9STRA (Long-chain acyl-CoA synthetase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C922_9STRA)

HSP 1 Score: 272 bits (695), Expect = 1.140e-82
Identity = 137/270 (50.74%), Postives = 177/270 (65.56%), Query Frame = 1 
Query:   13 QALPDMWDYLAAECGDNTAVIDPINPPDTVDGTRPPKGSETRLTYSEMRASVGKMAAALMALGVQKGDCVSVFSENSHRWLIAEQGIMRAGGCNAVRGATAPAPELRYIYADSESMGAVVETPKLLELLMEKDGEGLVGEDGALPRFLMVLYPKGKSGVELQESLNVPESVKVVTFSECLEGGGVFDASPAVDRSMKATLVYTSGTTGKPKGAILTHGNLLHQVAENSFDRSEGSPLNPWVGDVFVSILPCWHIFERTAEYFTLTRGATM 822
            + +PD+W ++  +C    A++D ++            G     TY+E+R  + ++A A  ALG+  G CVSVFSENS+RWL AEQGIM AGGCNAVRG  AP  EL+YIY +S S+G VVE  +LL+ L+   G+GL G+ G  PRF MVLY  GKSG +++E L +P  ++V+TF E +       A   +     ATLVYTSGTT KPKG IL H N++HQ+ ENSF+R+ G   +PWVGD FVSILPCWHIFERTAEYF L RG  M
Sbjct:   86 KVVPDLWTFMEKQCPSQIAIVDALH-----------GGITVVYTYAELRERIVRLAGAFQALGLAPGQCVSVFSENSNRWLTAEQGIMLAGGCNAVRGVAAPVEELQYIYENSLSVGVVVEKAELLKKLVFS-GKGLNGDQGP-PRFAMVLYAAGKSGAQIREELGLPVDMQVMTFQEAITARKPL-APVRITADQPATLVYTSGTTSKPKGVILRHSNMVHQILENSFNRANGGKYDPWVGDTFVSILPCWHIFERTAEYFMLARGVEM 341
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BLAST of mRNA_S-dermatodea_contig12057.1279.1 vs. uniprot
Match: L1J615_GUITC (AMP-binding domain-containing protein (Fragment) n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1J615_GUITC)

HSP 1 Score: 219 bits (557), Expect = 9.450e-66
Identity = 118/266 (44.36%), Postives = 165/266 (62.03%), Query Frame = 1 
Query:   28 MWDYLAAECGDNTAVIDPINPPDTVDGTRPPKGSETRLTYSEMRASVGKMAAALMALGVQKGDCVSVFSENSHRWLIAEQGIMRAGGCNAVRGATAPAPELRYIYADSESMGAVVETPKLLELLMEKDGEGLVGEDGALPRFLMVLYPKGKSGVELQESLNV-PESVKVVTFSECLEGGGVFDASPAVDRSMKATLVYTSGTTGKPKGAILTHGNLLHQVAENSFDRSEGSPLNPWVGDVFVSILPCWHIFERTAEYFTLTRGATM 822
            +W+ +     D+ A+ DP++            G    +TYS+  A++ +MA  L  LGVQKGD +++FSENS+RW + +  I++AG  + VRGATAP  EL++IY+DS S   VVE  +LLE L+++   G   E    P F++V+YPK KSG  ++    +   S +VVT  E L+    +    +V+    ATL+YTSGTTG PKG +LTHGNLLHQ+ EN +  S   PL P  GDVF+ ILPCWHIFER AEY++L RGA +
Sbjct:    1 LWEQMTRLFPDHVALSDPLH------------GFGDDMTYSQASAAITRMAGFLQELGVQKGDKIALFSENSYRWSLVDSAILQAGAVDVVRGATAPVDELKFIYSDSGSKACVVENVELLEKLVKQAKLGTEVE----PEFVVVMYPKDKSGETIKREAGLGSSSTRVVTVDEMLQSSSSY-TPVSVEEEDTATLLYTSGTTGHPKGVVLTHGNLLHQMLENVY--SPSLPLEPLPGDVFLCILPCWHIFERFAEYYSLVRGAKL 247
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BLAST of mRNA_S-dermatodea_contig12057.1279.1 vs. uniprot
Match: A0A4D9CQD3_9STRA (AMP-binding domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CQD3_9STRA)

HSP 1 Score: 204 bits (518), Expect = 7.650e-57
Identity = 120/276 (43.48%), Postives = 158/276 (57.25%), Query Frame = 1 
Query:   10 WQALPDMWDYLAAECGDNTAVIDPINPPDTVDGTRPPKGSETRLTYSEMRASVGKMAAALMALGVQKGDCVSVFSENSHRWLIAEQGIMRAGGCNAVRGATAPAPELRYIYADSESMGAVVETPKLLELLMEKDGEGLVGEDGAL--PRFLMVLYPKGKSGVELQESLNVPESVKVVTFSECLEGGGV----FDASPAVDRSMKATLVYTSGTTGKPKGAILTHGNLLHQVAENSFDRSEGSP--LNPWVGDVFVSILPCWHIFERTAEYFTLTRG 813
            W+ LPD+++ +A+   +  AV D ++ P              ++TY E+   +G +AA     G++ G CVSVF+ENSHRWLIA+Q I++AG CNAVRG  AP  EL+YIY +SES+ +VVE+ + +E           G    L  P    +  P   S  EL    N+P   +V+TF E L         F   P   RS+ ATLVYTSGTT KPKG +L H NLLHQV  NSF  S       NP +GDV VS+LPCWHIFERTAEY+  ++G
Sbjct:  121 WRTLPDVFETVASLAPEAVAVEDMVHTP------------TAKMTYGELNRQIGALAAFFQHEGLKPGQCVSVFAENSHRWLIADQAILKAGACNAVRGVKAPVDELQYIYQNSESVASVVESVEQIE-----------GTSTLLSFPPTQPLCEPTAASRAELA---NLPPPTQVLTFDEALSASLARPLTFRPVPKDVRSV-ATLVYTSGTTNKPKGVVLRHSNLLHQVNYNSFTDSPSKEPAYNPVLGDVLVSVLPCWHIFERTAEYWMFSKG 369
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BLAST of mRNA_S-dermatodea_contig12057.1279.1 vs. uniprot
Match: A0A5J4YJZ8_PORPP (Putative acyl-activating enzyme 16, chloroplastic n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YJZ8_PORPP)

HSP 1 Score: 197 bits (501), Expect = 2.740e-54
Identity = 116/287 (40.42%), Postives = 158/287 (55.05%), Query Frame = 1 
Query:    4 ASWQALPDMWDYLAAECGDNTAVIDPINPPDTVDGTRPPKGSETRLTYSEMRASVGKMAAALMALGVQKGDCVSVFSENSHRWLIAEQGIMRAGGCNAVRGATAPAPELRYIYADSESMGAVVETPKLLELLMEKDGEGLVGEDGALPRFLMVLYPKGKSGVELQESLNVP-ESVKVVTFSECLEGGGVFDASPAVDRSMK-------------ATLVYTSGTTGKPKGAILTHGNLLHQVAENSFDRSEGSPLNPWVGDVFVSILPCWHIFERTAEYFTLTRGATM 822
            A  ++LP++W     + G  TA+IDP  P              T LT++E+ A +   +A L  LG+++ + VS+FSENSHRWLIA+Q +  AG  +AVRG  APAPE++YIY  SES+G + ET  +L   +E       G  G    F ++ Y    +  EL  +     +S K+ +F + L  G   +A+    +                ATL+YTSGTTG PKG +L+HGNLLHQ    S    +  P     GDVFVSILPCWHIFERTAEYF L+RG T+
Sbjct:  150 AKCESLPELWLLAERQFGSRTAIIDPYCP-----------SGNTTLTFAELAAQIRAFSAGLRQLGLRRKETVSLFSENSHRWLIADQAVQMAGASSAVRGVAAPAPEIQYIYEHSESVGVICETKAVLMRFLES----FTGSLG----FAIIQYGALPTKEELAATKVARFDSSKLFSFEQVLANGEQAEAAAQEKKGSTGSTSAFAPAKEDCATLIYTSGTTGLPKGVVLSHGNLLHQTLYLSIGTVDTVP-----GDVFVSILPCWHIFERTAEYFVLSRGGTL 412
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BLAST of mRNA_S-dermatodea_contig12057.1279.1 vs. uniprot
Match: A0A7S4DTQ0_9EUKA (Hypothetical protein n=2 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S4DTQ0_9EUKA)

HSP 1 Score: 191 bits (486), Expect = 2.470e-52
Identity = 109/278 (39.21%), Postives = 155/278 (55.76%), Query Frame = 1 
Query:   16 ALPDMWDYLAAECGDNTAVIDPINPPDTVDGTRPPKGSETRLTYSEMRASVGKMAAALMALGVQKGDCVSVFSENSHRWLIAEQGIMRAGGCNAVRGATAPAPELRYIYADSESMGAVVETPKLLELLMEKDGEGLVGEDGALPRFLMVLYPKGKSGVELQESLNVPESVKVVTFSECLEGGGVFD-ASPAVDRSMKATLVYTSGTTGKPKGAILTHGNLLHQVAENSFDRSEGSPL----------NPWVGDVFVSILPCWHIFERTAEYFTLTRGA 816
            AL D+WD+L  +  D   + D  +            G +  +T+ ++   +    A L  L ++KGD V++FS+NSHRWLIA+  ++R G  +AVRG+TAP  EL YI   S+S+G + E  K+ E L+EKD  GLV       +F+++L+P+      +  SL+  E  KVVTF E ++ G       P V     A+L+YTSGTTGKPKG +L H   +HQ+  N+       P+          +P   DVFVSILP WHIFER AEY+ L+RGA
Sbjct:  121 ALGDIWDHLKDKVPDKICLTDDYH------------GDKAEMTFKQVWEVINDFGAGLQKLDLKKGDKVALFSDNSHRWLIADNAVIRCGAASAVRGSTAPGEELAYIMGHSDSVGLIAENYKVYETLLEKD-RGLVKS----LKFIVILFPENDGDPPMPVSLD-SEGPKVVTFQEVIDMGKTTTFQKPVVGLDDLASLIYTSGTTGKPKGVMLNHAQFIHQMLYNTMQTKPKGPIQFIKRLLYTSHPRPDDVFVSILPSWHIFERVAEYWILSRGA 380
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BLAST of mRNA_S-dermatodea_contig12057.1279.1 vs. uniprot
Match: A0A7S4PM04_GUITH (Hypothetical protein (Fragment) n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4PM04_GUITH)

HSP 1 Score: 178 bits (452), Expect = 1.020e-50
Identity = 101/241 (41.91%), Postives = 144/241 (59.75%), Query Frame = 1 
Query:   28 MWDYLAAECGDNTAVIDPINPPDTVDGTRPPKGSETRLTYSEMRASVGKMAAALMALGVQKGDCVSVFSENSHRWLIAEQGIMRAGGCNAVRGATAPAPELRYIYADSESMGAVVETPKLLELLMEKDGEGLVGEDGALPRFLMVLYPKGKSGVELQESLNV-PESVKVVTFSECLEGGGVFDASPAVDRSMKATLVYTSGTTGKPKGAILTHGNLLHQVAENSFDRSEGSPLNPWVGDVF 747
            +W+ +     D+ A+ DP++            G    +TYS+  A++ +MA  L  LGVQKGD +++FSENS+RW + +  I++AG  + VRGATAP  EL++IY+DS S   VVE  +LLE L+++   G   E    P F++V+YPK KSG  ++    +   S +VVT  E L+    +    +V+    ATL+YTSGTTG PKG +LTHGNLLHQ+ EN +  S   PL P  GDVF
Sbjct:  111 LWEQMTRLFPDHVALSDPLH------------GFGDDMTYSQASAAITRMAGFLQELGVQKGDKIALFSENSYRWSLVDSAILQAGAVDVVRGATAPVDELKFIYSDSGSKACVVENVELLEKLVKQAKLGTEVE----PEFVVVMYPKDKSGETIKREAGLGSSSTRVVTVDEMLQSSSSY-TPVSVEEEDTATLLYTSGTTGHPKGVVLTHGNLLHQMLENVY--SPSLPLEPLPGDVF 332
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BLAST of mRNA_S-dermatodea_contig12057.1279.1 vs. uniprot
Match: M1UXX2_CYAM1 (Long-chain-fatty-acid CoA ligase n=1 Tax=Cyanidioschyzon merolae (strain NIES-3377 / 10D) TaxID=280699 RepID=M1UXX2_CYAM1)

HSP 1 Score: 187 bits (475), Expect = 1.270e-50
Identity = 121/298 (40.60%), Postives = 160/298 (53.69%), Query Frame = 1 
Query:   10 WQALPDMWDYLAAECGDNTAVIDPINPPDTVDGTRPPKGSETRLTYSEMRASVGKMAAALMALGV---QKGDCVSVFSENSHRWLIAEQGIMRAGGCNAVRGATAPAPELRYIYADSESMGAVVETPKLLELLMEKDGEGLVGEDGALPRFLMVLYPKGKSGVELQESLNVPESVKVVTFSECLEGGG--VFDA------------------SPAVDRSMKATLVYTSGTTGKPKGAILTHGNLLHQVAENSFDRSEGSPLNPW----VGDVFVSILPCWHIFERTAEYFTLTRGATM 822
            W ++P +W+ LA    + TA+ID  NP             +   TY+E+   + ++AA L   G+   Q GD V++FSENS RWLI +Q +M  G  +AVRG  AP  EL YI   S++ G VV+TP +LE L+    E          RF+MVL+   + G   +   +   SV + T+ E  E G   V DA                   P  +R M ATLVYTSGTTG+PKGA+LTH NLLHQ+  NSF R+   PL P      GDV V+ILPCWHIFER  E + L+RG +M
Sbjct:  134 WASVPSIWETLAEAYSEITALIDEHNP----------YRQKISWTYAEVHEEIRELAAGLRHHGLTNLQPGDIVALFSENSARWLITDQALMWNGAASAVRGTAAPLDELAYILEHSDACGLVVDTPTVLEKLIRN--EQATRCLAKQVRFIMVLW--NRKGAIAEPIRSAVGSVPIYTYEEVTETGRAKVRDALNRTSRSPADAEMERALWRPIAEREMLATLVYTSGTTGQPKGAMLTHRNLLHQIMANSFSRA-WRPLLPSQDASAGDVMVNILPCWHIFERIGELYALSRGVSM 416
[Close]
BLAST of mRNA_S-dermatodea_contig12057.1279.1 vs. uniprot
Match: A0A7S2PYK4_9STRA (Hypothetical protein (Fragment) n=2 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PYK4_9STRA)

HSP 1 Score: 181 bits (459), Expect = 1.730e-50
Identity = 115/276 (41.67%), Postives = 151/276 (54.71%), Query Frame = 1 
Query:   16 ALPDMWDYLAAECGDNTAVIDPINPPDTVDGTRPPKGSETRLTYSEMRASVGKMAAALMALGVQKGDCVSVFSENSHRWLIAEQGIMRAGGCNAVRGATAPAPELRYIYADSESMG-AVVETPKLLELLMEKDGE-------GLVGEDGALPRFLMVLYPKGKSGVELQESLNVPESVKVVTFSECLEGGGV--FDASPAVDRSMKATLVYTSGTTGKPKGAILTHGNLLHQVAENSFDRSEGSPLNPWVGDVFVSILPCWHIFERTAEYFTLTRG 813
            + P +W  LA +C D  AV+D      T+D            T++EM   V + AAA   LGV+KG  V+V  ENS +WLI + GI  AGG +AVRGA AP  ELRYIY  S+S G AV++   LL+ L  KD +       GL  E    P   ++L  KGK   +  ++L     V+V   S+ L+      +   P +DRS  +T+VYTSGTTGKPKG +LTHGNLLHQV              P  G++ +S+LP WHI ERT E F L+RG
Sbjct:  107 SCPAIWRQLARDCPDKRAVLDEHLCDTTID-----------YTFAEMEDKVRRSAAAFKNLGVKKGVNVAVLGENSAQWLIIDHGIQLAGGASAVRGADAPLDELRYIYEHSDSAGIAVLQDVNLLQKL-SKDSKAKGVTNLGLSNESFG-PVKTIILMHKGKKTTDEIKALGEENGVEVHVLSDLLDSTSPASYKEMPTLDRSDLSTIVYTSGTTGKPKGVMLTHGNLLHQVGHRLSPTRPYDEAEPLPGELMISLLPVWHITERTFELFMLSRG 369
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BLAST of mRNA_S-dermatodea_contig12057.1279.1 vs. uniprot
Match: M2XZM6_GALSU (Long-chain acyl-CoA synthetase n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XZM6_GALSU)

HSP 1 Score: 185 bits (470), Expect = 3.960e-50
Identity = 109/271 (40.22%), Postives = 156/271 (57.56%), Query Frame = 1 
Query:   10 WQALPDMWDYLAAECGDNTAVIDPINPPDTVDGTRPPKGSETRLTYSEMRASVGKMAAALMALGVQKGDCVSVFSENSHRWLIAEQGIMRAGGCNAVRGATAPAPELRYIYADSESMGAVVETPKLLELLMEKDGEGLVGEDGALPRFLMVLYPKGKSGVELQESLNVPESVKVVTFSECLEGGGVFD---ASPAVDRSMKATLVYTSGTTGKPKGAILTHGNLLHQVAENSFDRSEGSPLNPWVGDVFVSILPCWHIFERTAEYFTLTRG 813
            W ++P MW  LA + G+  A++D  N            G  T+LT+ E+  S+   A AL  +G++KG+ V + SENS+RWL+ +Q +M  G  +AVRG+ AP  EL YIY  SES+G V E  ++L  L+EK G   +       +F ++L+  GK   +  +       +K+ +F   ++ G  +    + P    S  ATL+YTSGTTG+PKG  LTH NLL+Q+A  S D  +  P+    G+VFVSILPCWH+FERTAEYF   RG
Sbjct:  116 WPSVPHMWKDLAEKEGNRVAIVDQHN------------GQATKLTFLELHRSIQACAVALKRIGLKKGNKVCLISENSYRWLVLDQAVMTIGAASAVRGSGAPLLELCYIYEHSESIGLVAENAQVLVRLVEKLGSEKL-------KFAIILW--GKVPTDFPQ-------LKIFSFDSLIQEGWNYQNEVSVPFASSSDLATLIYTSGTTGRPKGVELTHENLLYQIA--SIDIGKCCPVP---GNVFVSILPCWHVFERTAEYFFFARG 353
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig12057.1279.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZ64_ECTSI1.550e-15980.59Long chain acyl-CoA synthetase n=1 Tax=Ectocarpus ... [more]
A0A836C922_9STRA1.140e-8250.74Long-chain acyl-CoA synthetase n=1 Tax=Tribonema m... [more]
L1J615_GUITC9.450e-6644.36AMP-binding domain-containing protein (Fragment) n... [more]
A0A4D9CQD3_9STRA7.650e-5743.48AMP-binding domain-containing protein n=2 Tax=Mono... [more]
A0A5J4YJZ8_PORPP2.740e-5440.42Putative acyl-activating enzyme 16, chloroplastic ... [more]
A0A7S4DTQ0_9EUKA2.470e-5239.21Hypothetical protein n=2 Tax=Lotharella globosa Ta... [more]
A0A7S4PM04_GUITH1.020e-5041.91Hypothetical protein (Fragment) n=1 Tax=Guillardia... [more]
M1UXX2_CYAM11.270e-5040.60Long-chain-fatty-acid CoA ligase n=1 Tax=Cyanidios... [more]
A0A7S2PYK4_9STRA1.730e-5041.67Hypothetical protein (Fragment) n=2 Tax=Skeletonem... [more]
M2XZM6_GALSU3.960e-5040.22Long-chain acyl-CoA synthetase n=1 Tax=Galdieria s... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig12057contigS-dermatodea_contig12057:540..6558 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score456.1
Seed ortholog evalue1.1e-125
Seed eggNOG ortholog2880.D7FZ64
Preferred nameAAE15
KEGG rclassRC00004,RC00014
KEGG koko:K01897
KEGG TC4.C.1.1
KEGG ReactionR01280
KEGG Pathwayko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920
KEGG ModuleM00086
GOsGO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0008922,GO:0009058,GO:0009507,GO:0009526,GO:0009536,GO:0009941,GO:0009987,GO:0015645,GO:0016053,GO:0016874,GO:0016877,GO:0016878,GO:0019752,GO:0030497,GO:0031967,GO:0031975,GO:0032787,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046394,GO:0071704,GO:0072330,GO:1901576
EggNOG free text desc.decanoate-CoA ligase activity
EggNOG OGsCOG1022@1,KOG1256@2759
EC6.2.1.3
COG Functional cat.I
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01004,ko04147
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionlong chain acyl-CoA synthetase
Ec32 orthologEc-02_006430.1
Exons6
Model size822
Cds size795
Stop0
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924228.958473-UTR-S-dermatodea_contig12057:539..5661622924228.958473-UTR-S-dermatodea_contig12057:539..566Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig12057 540..566 +
1694079109.6217935-UTR-S-dermatodea_contig12057:539..5661694079109.6217935-UTR-S-dermatodea_contig12057:539..566Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig12057 540..566 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924228.9675894-CDS-S-dermatodea_contig12057:566..7521622924228.9675894-CDS-S-dermatodea_contig12057:566..752Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12057 567..752 +
1694079109.6355655-CDS-S-dermatodea_contig12057:566..7521694079109.6355655-CDS-S-dermatodea_contig12057:566..752Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12057 567..752 +
1622924228.9757776-CDS-S-dermatodea_contig12057:1265..13841622924228.9757776-CDS-S-dermatodea_contig12057:1265..1384Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12057 1266..1384 +
1694079109.6536472-CDS-S-dermatodea_contig12057:1265..13841694079109.6536472-CDS-S-dermatodea_contig12057:1265..1384Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12057 1266..1384 +
1622924228.983697-CDS-S-dermatodea_contig12057:2447..25531622924228.983697-CDS-S-dermatodea_contig12057:2447..2553Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12057 2448..2553 +
1694079109.666932-CDS-S-dermatodea_contig12057:2447..25531694079109.666932-CDS-S-dermatodea_contig12057:2447..2553Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12057 2448..2553 +
1622924228.9980767-CDS-S-dermatodea_contig12057:3401..34911622924228.9980767-CDS-S-dermatodea_contig12057:3401..3491Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12057 3402..3491 +
1694079109.6765058-CDS-S-dermatodea_contig12057:3401..34911694079109.6765058-CDS-S-dermatodea_contig12057:3401..3491Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12057 3402..3491 +
1622924229.0090792-CDS-S-dermatodea_contig12057:5388..55411622924229.0090792-CDS-S-dermatodea_contig12057:5388..5541Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12057 5389..5541 +
1694079109.6841054-CDS-S-dermatodea_contig12057:5388..55411694079109.6841054-CDS-S-dermatodea_contig12057:5388..5541Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12057 5389..5541 +
1622924229.0205874-CDS-S-dermatodea_contig12057:6417..65581622924229.0205874-CDS-S-dermatodea_contig12057:6417..6558Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12057 6418..6558 +
1694079109.6920257-CDS-S-dermatodea_contig12057:6417..65581694079109.6920257-CDS-S-dermatodea_contig12057:6417..6558Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12057 6418..6558 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig12057.1279.1prot_S-dermatodea_contig12057.1279.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig12057 567..6558 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig12057.1279.1

>prot_S-dermatodea_contig12057.1279.1 ID=prot_S-dermatodea_contig12057.1279.1|Name=mRNA_S-dermatodea_contig12057.1279.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=265bp
MWDYLAAECGDNTAVIDPINPPDTVDGTRPPKGSETRLTYSEMRASVGKM
AAALMALGVQKGDCVSVFSENSHRWLIAEQGIMRAGGCNAVRGATAPAPE
LRYIYADSESMGAVVETPKLLELLMEKDGEGLVGEDGALPRFLMVLYPKG
KSGVELQESLNVPESVKVVTFSECLEGGGVFDASPAVDRSMKATLVYTSG
TTGKPKGAILTHGNLLHQVAENSFDRSEGSPLNPWVGDVFVSILPCWHIF
ERTAEYFTLTRGATM
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mRNA from alignment at S-dermatodea_contig12057:540..6558+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig12057.1279.1 ID=mRNA_S-dermatodea_contig12057.1279.1|Name=mRNA_S-dermatodea_contig12057.1279.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=6019bp|location=Sequence derived from alignment at S-dermatodea_contig12057:540..6558+ (Saccorhiza dermatodea SderLu1190fm monoicous)
AGTGCGTCGTGGCAAGCTCTTCCCGACATGTGGGACTACCTGGCGGCCGA
GTGCGGCGACAACACCGCCGTCATCGACCCCATCAACCCTCCCGACACGG
TAGACGGGACGCGGCCGCCTAAGGGTTCTGAGACGCGCCTGACGTATTCG
GAGATGCGGGCGAGCGTCGGGAAGATGGCGGCGGCCCTGATGGCGTTGGG
AGTGCAGAAGGGGGTGAGAGAGTTAAGGGTGGAAAATAGCGCTGGTTGGG
ATGGGGCGGGAAGGGGGGGGGAGGGGGGGGGGCTTGGGCCATACTTTCCT
CTACACAAAGGTTGGACCCCAACGCTCGCGTTGTTTTTATATATTGTTAC
TGTTTCAGCGGGAGGTACTTATGTTAAACGTATGCCGTATCCAAACGGAC
ATGGACCACGCATCTCAGTAATGCCGGGACGGAGCGAAATGCCAGGTGTT
CGCCGGGCCAGGCTGCGTTTCGCAAGGATGATGCCAGCTGCTAGCCATCA
CCCTTGAGTTTGCCACGCCAAACAGATATGCTATGGGTTGATTGGACATA
CCGGGCGACCACATGCTGCATATTCAGTAGGCGTGACTATACTCCAAGTA
GCAAAGGGACTTGATCACTCGCTGCTATGTACCAGTATACCCCACGCGGC
TGTCCTCTTTTAGCAAGCGCCGGGGTTGAATTTATTCGCTGTTTGCTGCC
TGCGCGCGCTTCATTCGCCTCGCTAGGATTGCGTCTCTGTCTTCTCGGAG
AACAGCCACCGGTGGCTGATCGCCGAGCAGGGGATCATGCGCGCGGGCGG
GTGTAACGCCGTACGAGGTGCAACGGCGCCGGCCCCAGAGCTAAGGTGTG
CGACCGGGGGGCTGCCGTGGGGTGGCTTGGTGCAGTTGGCGAACGGTCGT
GTGCTAATAGTGTGGAGGAACGAGGCAAATTTTCTTACTTGTCTCGTCAG
TGGCGCTTCCGCTGATGTGGGATAGCCGCTTGGGCGTAAAATGCGTTTTC
CGGGCTCTCCGAGGGCCGTCTCTGCTGCTGTTGGTGGGGCGTGTCGGGGC
GCAGTGTTGACGTGGCTGGGCGGCGGCCGTGCTGGCGACCGCTGTGGCAC
GTACACAAGACAAGACGGTACTGTGTAGTGGGTTTAGATAAATAGTGCGT
GTCATACTGACTGCAGATCCCATCTTTTTGTATTGTAGAGTTTCGGCTTG
AGTGTCCACTTTTAAACCTGCTATGATATTTAATGCAGAAAGTTGTAAAA
TATGAGAGAAATGATTCGCCTTGTGTTTTGAGACCGGCAGGATAGTGTAG
ACCACGAGATGCGGACCGGTGTCGGACGGACGCACACTCCTTTATGCGCG
TACCCGTGAGGTTCCCGCTTTCAACACCATAGTACGTACAAAAACATTTC
CTTATGATGGCAGAGAGGGGGGGGGAGGAGGTTTGAAATCTATATTATTT
TAGGGGGGGGAGCACGGCCGTTTTTCGTCCGGTCCAGCTCTAACTAGGCG
TCCCAGCGCAGAGCACTCTCCGATGTTGTTTGTTGTTGTTGGTGCTGTTG
TTGTTGCTCCACGCGCGAAACGAAAGCATCCAATCTTTGGGGACGACACC
CCTGAAAATCGTTCACTTCCACCCCAAGTCCTGCAGACCGTACCGACGCC
GTAATATTTAGGAGTTGTGCGGTACTATATATTATACATAACCTTAAACC
TTCTCACCTTAACAAGCTCTTTGACGCACACCAACTCACGGCGGTTCTCG
CGTTCTCGTGTACAGCCTCCTCTACAACCAACATGATCGTCGTCGAGTGG
GGGCGAGAGACTCTTTCACGGTGCTCCATGCACATGACATATTTGATAAT
TGACTCTCCCCGTTGGTTCATTTCCCTGTCGCTGCCCACACTCTCACGCA
CGACCAAGGTACATATATGCGGACAGCGAATCCATGGGTGCCGTCGTGGA
AACCCCGAAGCTCCTGGAGCTCTTGATGGAGAAGGACGGAGAGGGGCTGG
TTGGGGAAGACGGGGTGAGAGCCGTAGCGGTCCCGGCCGGCATGCCTTTT
TGTTTCGGGTCGGTCCTTGAAAACAGGTGTCTGACGATTTGTCCGGAAAG
TGCCCTCCCCCCACCACACCCCCACTAAAACCAAAATGCATTTGATGGAA
TGAGACTCTGGCGAACAGACCCCCTTTTGGTATGAAGTCTCCCTCCCTAC
CCAAATTCATGTTATGGAATGAGACACTGATGTTCAAAACCTCATTACGT
TTGAAGGGATTCCGGCGTACATACCATGGTAAGAACCCCCCACCGCCCTG
GAGCTGTATGTAAGAGGGTACGTCGTAACGCCTGGAAGGCCGTGCGCGTG
TGCGGGTGGCCATGCCTTTTTGGAGGTGGTACCCAGCTTCTGGAAGAACT
CGAATCGCATGTTGTAGGTTGCGGTGTGGGGATATCCTTGCGCTTCCTCG
GTGTGAAACAGTATCATGAATCAACCCCACGACAACGATGTCAAACTCGT
CGAATGGAGTGAGAATCCGGGGATCCATGTTTTGACGTATTTTGGCTCGA
GTTGATGTCCAAGTATGTATAAAACAGTACTTTAAACACTCCTCTTGAAA
ACCAGTGAGGCCGTAGTGTTAACACGGCAGCTTGGTATCACCCCCGCTAC
TGCTGTAGGTGCATGTATCAATTGCCTTGACCGCAGCTCGCACCAACGGT
GACGGCGGCGGCATCAGTATCAGCATGCAGCATATTTTGTCGGGATTAAG
CCGATCGGCTATACGTGTGCAAATCAATCAATCAATCAATCAATCAATCG
GAACACGTATTATAAACATCACGGCTCAAGGCCCCCCACCCTTTTCATTT
TCGTCCTGGCAGGCACTACCCCGATTCTTGATGGTGCTCTATCCGAAGGG
GAAGAGTGGCGTGGAACTGCAGGAGAGCCTTAACGTTCCGGAATCCGTCA
AGGTGCGCGCGGCGCATGTCGCGCCGGCTTAAGCTTCCCTTCGTTTTTCG
CCAGTCTCGCAAAACCCTTGCGAAGACCCCCCCCCCACCCAACCCTGCTG
CGGCTGGCTTGTCTTCGGTGCAGGGCACCTCGACTCCGATTTTCCCTTCT
CGGGACCAAAAACTCACAAAAAAAACAACACAAAGATGATCAGTTGTAAC
GAAGTTTTCCCAATCGCCGTATTTGATGCATTTATTGTGTTTTATTACAT
TTTTTGCGCCCATCGGTGAAGGGACCCCTTGCTGAGAGCGGTATAGCTTT
TTTGCCGCTGCGGGTGTTTTGGCTTGAATTTTGGCATGAGCTGCGGCAAA
GGCCGGGGGTCGCTTTGTGTGTTTGTGTATGTGTGTGTATGCGTGCATAT
GTTTCCATTCGCCCGGCCGTCCGATACGAAAAGCGTTGTGGGAACGTTTT
TTACTGCGGGAGAAGTTGCCGAGAATGCTGTACTACTAATATCAGCATAT
ATACGTAGCAGGCTTGCAGAGGCGGAGAGAGCTCGCCGTACGAGCCCCCG
TTTCAGGGTCATGTTTTGGCGTCGCATCGGTGGGGGTTTCTTGCCGAAAC
GAGAGGCGGTATAGCGCGGCGTGCACCACGCCCGCGGCAAAAGCCAGGGG
TTTGCGCTGTGTCGTGCTGTAGGGAGCCCGTGGTGGCACATCGCCCTTGT
AGCTATTTAGGGGACCGCAGACATGCGTTTCGGCGGCATGAGACAGAGCA
TCCTAATGGCCCCGGACCCTGGCCGTTCAATAAAAGCTAAAGATGGTGCG
GATGCGCCCCTCCCGTTTTTTTCCAGCCCCCCTCTCGAAGGTCTGTCCCG
TGAGAGACGGGCGTAACGTTCGTTTGCGAAGAGTCGCGCACCAAACACAA
GAGAACGTCAGAACATACACTGAGCTGCCGTGTGCTTTATCGTTTGTTGG
AGCAAGGTGTCTCAGGCCCCCCTGTTGAGCGTTATAGTATGCATAACACT
ACGTTGCAGGTTTACAGGTGTCTCTCTCATGCAGAGCATTAGATAAGTGT
GATATCCCCCCAAAGGCAAGAAGCCGTGGGGATGGTCCTTTTTGTTTGGA
GCACAACGGCCCAGACTATCCACCTTTTTGTATATGGAGCGTGAATTTTG
TGTATAGCACGACCGTGCAGAATAGCAGGTGTCTTGACCATTCAGCATTA
GAACCCCCCCGGTCCCCCCGTCCTGTCGAAGACGCGTGGTCCATGGTCTA
ACAGCTAAGGCATGCTAAACATTAGCACCCCCGGTGGTTTATGCAGTATG
TCCTGTGAGCTCGGAGACCTCGGTCGAAGAGTTTTGTCTCTCCCCAAAGG
GGCGAAAAGCACCACATCCTGTAGGACACCTGTTGAACATAGGATTGCTG
GAACGCCCTAGAGCAACCATTGACTTACGAGTAGTACTCCGCCAGGAGTA
CTCATATGAGCAGATTATAGTCCGAGTGTATCATCGCACATATACCGTCG
TGTATAATGTGTGCGTGCGGCGCTTTTGCGTTCGCACGGTGATCAAAGTC
CCTTTGCGGTACTTTGAGCATAGGCACGCCTACTGATTGTGCACCATTTG
GTTGTCCGGTATGTCTAATCAACCCATAGCATACCGTTTGGAGTTGCAAA
CGCAAGGATGACGACCAGCAGCTGGTACCATCCTTGTGAAACGCAGCCTG
GCCGGCGAAACCCGGCATGTCGCTCAGTCCCGGTATTGTTGGGACGCGTG
GTCTATGCCCGTTTGAATACGACACGCGTTTAACATAAGTACCCCCCCCC
CGTCCGTCCGTCCGTCCGTCCGTCCGTCCGCCCCTCTTGCTGACGGATCT
TTTGTATGCGATTTCGGTCCCGGCTCTTCGGTGGGATGTATGTGTGCAGG
TGGTGACCTTCTCGGAGTGCCTGGAGGGCGGAGGCGTTTTCGACGCCTCC
CCCGCGGTAGATCGCTCCATGAAGGCCACCCTTGTGTACACGTCTGGCAC
GACGGGGAAACCTAAAGGGGCCATCTTGACCCACGGCAACCTGCTGCACC
AGGTGCGTGGGAAAAAGAGAACATGCATTGCTTGCGTGGTTTGTGTCACA
GTAGTCGGTTCGTTCTTCGTGAGCGGACTACTCAGTGCGAACGCCCTGGC
GTGCGTTTTTGCTTCATACTTTAAAAAATGAGGGTTCGTTGCACTAGTAT
TGAGTGCCTCATTCCACACAATTATTGTCTTTGTTTTTTTGGGTTGTGTG
CACTGTTTTGAGGCCGGATTCCGCACCCCGAGGTCCTCACCCTCTCATTA
TAAAAGAATGACTTTCGTCTTCCATGGTCATTCAGTGCGCCACTATCTTT
GCCATCATCAATTGTGCTTAATTTAATAGTACATGCTAACGTAACGCCGA
CGTGGCACACGTGCAAAATTCCTTCACGTCTTGGTTGCAGGGGGCACCCG
GAGGTACTCTTGCTCCGTGCGCAAAACTAATGAATACCATCACAAAAATG
ATTTGTTCGAAACAAGTGGTAGAAAAGACACATCTCGGTGTTGTTGTGGT
GTATGTAGCGCACGGCTAACTAGGTGACCGTTGAAGTATTAAAAAGTGTA
TTCAGTGTGTGTGTTTGTGTGTGTTTAGTGTCCGTGTCGTAGTGATCCAC
TAAATACTGCTGCAGCCAGCATTCCGCGAAGGCGGTAAATTAGTAAGCAC
GGAAGGGGCGTGGGGGGGTGCCGGGTTCGCAGCTCGAGGCTTATGAATAT
CCACGCCTCCGCCATACTTACAGCCTCCCCCAAAAATACAAAACCCCCTA
CCCCCTCCCTTAACCACCCGCACTCCCCTGCGCTCACTGGTGTCCCATCT
GTCTCTTGCTTGGCGTGGTCGGCGGCATTTTGTTTGATTTTTTTTTCGGT
CGGTCTGTTCGATGTAACAACGAATCAGGTGGCTGAGAACTCGTTCGACC
GCTCAGAGGGCAGCCCTCTGAATCCGTGGGTCGGCGACGTGTTCGTGTCT
ATCCTTCCTTGTTGGCACATCTTCGAGAGGACCGCTGAATACTTCACGCT
CACGAGGGGTGCCACCATG
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Coding sequence (CDS) from alignment at S-dermatodea_contig12057:540..6558+

>mRNA_S-dermatodea_contig12057.1279.1 ID=mRNA_S-dermatodea_contig12057.1279.1|Name=mRNA_S-dermatodea_contig12057.1279.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1590bp|location=Sequence derived from alignment at S-dermatodea_contig12057:540..6558+ (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGTGGGACTACCTGGCGGCCGAGTGCGGCGACAACACCGCCGTCATCGA
CCCCATCAACCCTCCCGACACGGTAGACGGGACGCGGCCGCCTAAGGGTT
CTGAGACGCGCCTGACGTATTCGGAGATGCGGGCGAGCGTCGGGAAGATG
GCGGCGGCCCTGATGGCGTTGGGAGTGCAGAAGGGGATGTGGGACTACCT
GGCGGCCGAGTGCGGCGACAACACCGCCGTCATCGACCCCATCAACCCTC
CCGACACGGTAGACGGGACGCGGCCGCCTAAGGGTTCTGAGACGCGCCTG
ACGTATTCGGAGATGCGGGCGAGCGTCGGGAAGATGGCGGCGGCCCTGAT
GGCGTTGGGAGTGCAGAAGGGGGATTGCGTCTCTGTCTTCTCGGAGAACA
GCCACCGGTGGCTGATCGCCGAGCAGGGGATCATGCGCGCGGGCGGGTGT
AACGCCGTACGAGGTGCAACGGCGCCGGCCCCAGAGCTAAGGATTGCGTC
TCTGTCTTCTCGGAGAACAGCCACCGGTGGCTGATCGCCGAGCAGGGGAT
CATGCGCGCGGGCGGGTGTAACGCCGTACGAGGTGCAACGGCGCCGGCCC
CAGAGCTAAGGTACATATATGCGGACAGCGAATCCATGGGTGCCGTCGTG
GAAACCCCGAAGCTCCTGGAGCTCTTGATGGAGAAGGACGGAGAGGGGCT
GGTTGGGGAAGACGGGGTACATATATGCGGACAGCGAATCCATGGGTGCC
GTCGTGGAAACCCCGAAGCTCCTGGAGCTCTTGATGGAGAAGGACGGAGA
GGGGCTGGTTGGGGAAGACGGGGCACTACCCCGATTCTTGATGGTGCTCT
ATCCGAAGGGGAAGAGTGGCGTGGAACTGCAGGAGAGCCTTAACGTTCCG
GAATCCGTCAAGGCACTACCCCGATTCTTGATGGTGCTCTATCCGAAGGG
GAAGAGTGGCGTGGAACTGCAGGAGAGCCTTAACGTTCCGGAATCCGTCA
AGGTGGTGACCTTCTCGGAGTGCCTGGAGGGCGGAGGCGTTTTCGACGCC
TCCCCCGCGGTAGATCGCTCCATGAAGGCCACCCTTGTGTACACGTCTGG
CACGACGGGGAAACCTAAAGGGGCCATCTTGACCCACGGCAACCTGCTGC
ACCAGGTGGTGACCTTCTCGGAGTGCCTGGAGGGCGGAGGCGTTTTCGAC
GCCTCCCCCGCGGTAGATCGCTCCATGAAGGCCACCCTTGTGTACACGTC
TGGCACGACGGGGAAACCTAAAGGGGCCATCTTGACCCACGGCAACCTGC
TGCACCAGGTGGCTGAGAACTCGTTCGACCGCTCAGAGGGCAGCCCTCTG
AATCCGTGGGTCGGCGACGTGTTCGTGTCTATCCTTCCTTGTTGGCACAT
CTTCGAGAGGACCGCTGAATACTTCACGCTCACGAGGGGTGCCACCATGG
TGGCTGAGAACTCGTTCGACCGCTCAGAGGGCAGCCCTCTGAATCCGTGG
GTCGGCGACGTGTTCGTGTCTATCCTTCCTTGTTGGCACATCTTCGAGAG
GACCGCTGAATACTTCACGCTCACGAGGGGTGCCACCATG
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