prot_S-dermatodea_contig1202.1256.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig1202.1256.1
Unique Nameprot_S-dermatodea_contig1202.1256.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length264
Homology
BLAST of mRNA_S-dermatodea_contig1202.1256.1 vs. uniprot
Match: D7G670_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G670_ECTSI)

HSP 1 Score: 179 bits (453), Expect = 3.710e-51
Identity = 145/313 (46.33%), Postives = 165/313 (52.72%), Query Frame = 0
Query:    1 MMAMESSVLGCGSDDWSVDSDYAFQDFNDDGQPGPNPQ------------SASPERAHRVTAGA-----RNMGRSTARGGRGATNPEEEVEEEASNANVRAVTPRREEARSL-----PREDSVSEGKADAAGSA-RDEQQHPCAPGARPFGDPGSSTDSTHILRLEQRMFLKAAFQLLEERDRLFPAPIVFEQGDGGEGLAGDD----------------RDDKRRGGSGRGETADGTVDAGE-GRG----FQEH-----GQCTRIFKSGALRKATARSMGRLETTTWKTKYIEVTPGKFAYAD-GSSVLGKR 263
            M+A+ESSVLGCGSDDWSVDSDYAFQDF DD +     Q            S+SP R             + +  S     R  T    E  E A  A    +T    +A        P E  V   +  +A  A +D + HP     R FGDPGSS+DSTHILRLEQRMFLKAAFQLLEERDRLFPA I      G  G AG                  RD  RRGG   G    G V AG+ G G    FQ+H         RI KSG LRKATARS+GRLE TTWKTKY+E+TPG FAY+D G  V+GKR
Sbjct:    1 MIALESSVLGCGSDDWSVDSDYAFQDFADDVKHHQQQQARHEKSEQNLLQSSSPTRERSAVPNPGTPINKRVVGSLDDNSRAETTELHEHPEAAEGARADTLTAGGAQAXXXXXXXXPEEGEVGGSRRGSASEAGKDNRHHPVLSNTRLFGDPGSSSDSTHILRLEQRMFLKAAFQLLEERDRLFPASI------GSWGTAGGGWVXXXXXXXXXXXSNLRD--RRGGYVNG----GAVSAGKAGEGARFHFQQHEPNFYANRPRILKSGTLRKATARSVGRLEKTTWKTKYVELTPGSFAYSDNGPIVIGKR 301          
BLAST of mRNA_S-dermatodea_contig1202.1256.1 vs. uniprot
Match: A0A6H5KYB1_9PHAE (PH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYB1_9PHAE)

HSP 1 Score: 96.3 bits (238), Expect = 2.590e-20
Identity = 67/136 (49.26%), Postives = 76/136 (55.88%), Query Frame = 0
Query:  146 MFLKAAFQLLEERDRLFPAPIVFEQGDGGEGLAG-------------DDRDDKRRGGSGRGETADGTVDAGEGRGFQEH-----GQCTRIFKSGALRKATARSMGRLETTTWKTKYIEVTPGKFAYAD-GSSVLGK 262
            MFLKAAFQLLEERDRLFPA I    G  G    G              +  D+R G       + G    G    FQ+H         RI KSG LRKATARS+GRLE TTWKTKY+E+TPG FAY+D G  V+GK
Sbjct:    1 MFLKAAFQLLEERDRLFPASI----GSWGTAAGGWVPXXXXXXXXXXSNLRDQRGGYVNGAAVSAGKAGEGPRFHFQQHEPTFYANRPRILKSGTLRKATARSVGRLEKTTWKTKYVELTPGSFAYSDNGPIVIGK 132          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1202.1256.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G670_ECTSI3.710e-5146.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KYB1_9PHAE2.590e-2049.26PH domain-containing protein n=1 Tax=Ectocarpus sp... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig1202contigS-dermatodea_contig1202:9488..10893 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig1202.1256.1mRNA_S-dermatodea_contig1202.1256.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig1202 9488..10893 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig1202.1256.1 ID=prot_S-dermatodea_contig1202.1256.1|Name=mRNA_S-dermatodea_contig1202.1256.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=264bp
MMAMESSVLGCGSDDWSVDSDYAFQDFNDDGQPGPNPQSASPERAHRVTA
GARNMGRSTARGGRGATNPEEEVEEEASNANVRAVTPRREEARSLPREDS
VSEGKADAAGSARDEQQHPCAPGARPFGDPGSSTDSTHILRLEQRMFLKA
AFQLLEERDRLFPAPIVFEQGDGGEGLAGDDRDDKRRGGSGRGETADGTV
DAGEGRGFQEHGQCTRIFKSGALRKATARSMGRLETTTWKTKYIEVTPGK
FAYADGSSVLGKR*
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