prot_S-dermatodea_contig12003.1248.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig12003.1248.1
Unique Nameprot_S-dermatodea_contig12003.1248.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length345
Homology
BLAST of mRNA_S-dermatodea_contig12003.1248.1 vs. uniprot
Match: A0A6H5K1D2_9PHAE (Beta_helix domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1D2_9PHAE)

HSP 1 Score: 306 bits (784), Expect = 3.480e-97
Identity = 180/343 (52.48%), Postives = 205/343 (59.77%), Query Frame = 0
Query:    1 NNIIENCGIYDFRFQFDSVIGEAIYLGTSSNQWTTFPADSNYQEFAGEGYPDESNYNLITGNILTPRGNECVDVKEGASFNMIEHNECSEQLDEESGCYDSRGNENTFRYNSGSRCLGGGIRLGGHEIDGFVYGVDNIVYGNEFEGTGHGSIKSRKEPQGLICGNSCSGSGDCDVSEEGDDEEIESTWDQPCPETLPTVPYIDD-EVPA-PAPTPEEMPVAETSSPVSQLTAPTSSSGGNHRSSGCGCGVFDLLSLHFPSATAWSRLTTSPSESKVLGGNTSSTCIGILSPQGKACCAESCGTCGGPDCSSRSGGADSCCVSNISETAEKCSATDMVGPCLVN 341
            NN IENCGIYDFRFQFD  IGEAIY+GTSSNQW     D         G PD SNYNL+TGN L PRGNECVD+KEGA+ N++E+NEC +Q D ESGCYDSRGNENTFRYN+  +CLG GIRLGGH IDGFVYGVDN VYGNEF  T  GSIKSR EPQG+IC NSC+ +G+C VSEEGD EEIE +WDQ CP + P+VP+IDD E PA PAPT                   T S                  S                          ++TC G+LS  G  CCA SCG CGG  CS R GG + CC   I      C  T    PC+++
Sbjct:  193 NNDIENCGIYDFRFQFDGKIGEAIYIGTSSNQWEDGTGDR-----VTNG-PDGSNYNLVTGNKLVPRGNECVDIKEGATMNVVEYNECEDQRDAESGCYDSRGNENTFRYNTAVQCLGAGIRLGGHTIDGFVYGVDNHVYGNEFLETEAGSIKSRVEPQGVICDNSCA-NGECGVSEEGD-EEIEGSWDQGCPSSFPSVPFIDDLETPAAPAPTXXXXXXXXXXXXXXDEVGSTMSE----------------ASXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCNGVLSGMGYYCCAASCGECGGEGCSKRRGGENGCCTKAIQFGGVMCEDTGGQAPCILD 511          
BLAST of mRNA_S-dermatodea_contig12003.1248.1 vs. uniprot
Match: D8LJ29_ECTSI (FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ29_ECTSI)

HSP 1 Score: 296 bits (757), Expect = 6.740e-96
Identity = 162/242 (66.94%), Postives = 181/242 (74.79%), Query Frame = 0
Query:    1 NNIIENCGIYDFRFQFDSVIGEAIYLGTSSNQWTTFPADSNYQEFAGEGYPDESNYNLITGNILTPRGNECVDVKEGASFNMIEHNECSEQLDEESGCYDSRGNENTFRYNSGSRCLGGGIRLGGHEIDGFVYGVDNIVYGNEFEGTGHGSIKSRKEPQGLICGNSCSGSGDCDVSEEGDDEEIESTWDQPCPETLPTVPYIDD-EVPA-PAPTPEEMPVAETSSPV-SQLTAPTSSSGGNH 239
            NN IENCGIYDFRFQFD  IGEAIY+GTSSNQW     D         G PD SNYNL+TGN L PRGNECVD+KEGA+ N++E+NEC +Q D ESGCYDSRGNENTFRYN+  +CLG GIRLGGH IDGFVYGVDN VYGNEF  T  GSIKSR EPQG+IC NSC+  G+C VSEEGDDEEIE +WDQ CP + P+VP+IDD E PA PAPTPE    A T SP  SQ    +  SGG +
Sbjct:   44 NNDIENCGIYDFRFQFDGKIGEAIYIGTSSNQWEDGTGDR-----VTNG-PDGSNYNLVTGNELVPRGNECVDIKEGATMNVVEYNECEDQRDAESGCYDSRGNENTFRYNTAIQCLGAGIRLGGHTIDGFVYGVDNHVYGNEFLETEAGSIKSRVEPQGVICDNSCA-DGECGVSEEGDDEEIEGSWDQGCPASFPSVPFIDDLETPAAPAPTPEV--AASTPSPTDSQNEGCSKRSGGEN 276          
BLAST of mRNA_S-dermatodea_contig12003.1248.1 vs. uniprot
Match: D8LJ42_ECTSI (FirrV-1-B30 n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ42_ECTSI)

HSP 1 Score: 284 bits (726), Expect = 1.280e-86
Identity = 137/204 (67.16%), Postives = 160/204 (78.43%), Query Frame = 0
Query:    1 NNIIENCGIYDFRFQFDSVIGEAIYLGTSSNQWTTFPADSNYQEFAGEGYPDESNYNLITGNILTPRGNECVDVKEGASFNMIEHNECSEQLDEESGCYDSRGNENTFRYNSGSRCLGGGIRLGGHEIDGFVYGVDNIVYGNEFEGTGHGSIKSRKEPQGLICGNSCSGSGDCDVSEEGDDEEIESTWDQPCPETLPTVPYIDD 204
            +N IE+CGIYD+R+ FD  +GEAIY+GTSSNQW    AD           PD  NYNL+TGN L PRGNECVD+KEGA+ N++E+N+C +Q D ESGCYDSRGNENTFRYN+   CLGGGIRLGGHEIDG  YGVDN VYGN F  TG GSIK+R++PQG+IC NSC   GDCDVSEEGDDEEIE +WDQ CP +LP+VP+IDD
Sbjct:  239 DNDIEDCGIYDYRYTFDGKVGEAIYIGTSSNQWAD-GADGRVTNG-----PDGCNYNLVTGNKLVPRGNECVDIKEGATMNVVEYNDCEDQRDVESGCYDSRGNENTFRYNTAENCLGGGIRLGGHEIDGITYGVDNHVYGNSFRETGDGSIKARRDPQGVICENSCE-DGDCDVSEEGDDEEIEDSWDQECPSSLPSVPFIDD 435          
BLAST of mRNA_S-dermatodea_contig12003.1248.1 vs. uniprot
Match: D7FXR9_ECTSI (FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXR9_ECTSI)

HSP 1 Score: 181 bits (460), Expect = 1.370e-50
Identity = 94/181 (51.93%), Postives = 120/181 (66.30%), Query Frame = 0
Query:    2 NIIENCGIYDFRFQFDSVIGEAIYLGTSSNQWTTFPADSNYQEFAGEGYPDESNYNLITGNILTPRGNECVDVKEGASFNMIEHNECSEQLDEESGCYDSRGNENTFRYNSGSRCLGGGIRLGGHEIDGFVYGVDNIVYGNEFEGTGHGSIKSRKEPQGLICGNSCSGSGDCDVSEEGDDE 182
            N I NCG++D+ F  +   GE +Y+GTSS QWT            GE   D  N N+++ N+++  GNECVD+KEG+S N+IE N CS+QLD ESGCYDSRG+ NTFRYN GS C G G+RLGG E+DG  YGV+N VYGN+F   G G++K     QG ICGN+C   G C ++  GDDE
Sbjct:  186 NTISNCGVHDYMFNSEDKNGEGVYIGTSSTQWTN-----------GE---DTCNGNVVSRNLISTSGNECVDIKEGSSGNVIEDNFCSDQLDAESGCYDSRGDGNTFRYNVGSECTGAGVRLGGWEVDGHQYGVNNSVYGNDFYAVGVGALKVLVGEQGDICGNTCE-EGSCSLT--GDDE 349          
BLAST of mRNA_S-dermatodea_contig12003.1248.1 vs. uniprot
Match: D7FXR8_ECTSI (FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXR8_ECTSI)

HSP 1 Score: 185 bits (469), Expect = 2.340e-50
Identity = 96/180 (53.33%), Postives = 117/180 (65.00%), Query Frame = 0
Query:    2 NIIENCGIYDFRFQFDSVIGEAIYLGTSSNQWTTFPADSNYQEFAGEGYPDESNYNLITGNILTPRGNECVDVKEGASFNMIEHNECSEQLDEESGCYDSRGNENTFRYNSGSRCLGGGIRLGGHEIDGFVYGVDNIVYGNEFEGTGHGSIKSRKEPQGLICGNSCSGSGDCDVSEEGDD 181
            N I NCG++D+ F      GE +Y+GTSS QWT            GE   D  N NL++GN ++  GNECVD+KEGAS N+IE N CSEQLD ESGCYDSRG+ NTFRYN G+ C+G G+RLGG E+DG  YGV N VYGN+F   G G++K     QG ICGN+C   G C +  E DD
Sbjct:  186 NTISNCGVHDYMFNSGDKNGEGVYIGTSSTQWTN-----------GE---DTCNDNLVSGNRISTSGNECVDIKEGASGNVIEDNICSEQLDAESGCYDSRGDGNTFRYNVGTDCMGAGVRLGGWEVDGHQYGVGNSVYGNDFNAVGEGALKVLVGEQGDICGNTCE-DGSCSLVGEDDD 350          
BLAST of mRNA_S-dermatodea_contig12003.1248.1 vs. uniprot
Match: D7FZD2_ECTSI (FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZD2_ECTSI)

HSP 1 Score: 178 bits (452), Expect = 5.740e-48
Identity = 96/206 (46.60%), Postives = 126/206 (61.17%), Query Frame = 0
Query:    1 NNIIENCGIYDFRFQFDSVIGEAIYLGTSSNQWTTFPADSNYQEFAGEGYPDESNYNLITGNILTPRGNECVDVKEGASFNMIEHNECSEQLDEESGCYDSRGNENTFRYNSGSRCLGGGIRLGGHEIDGFVYGVDNIVYGNEFEGTGHGSIKSRKEPQGLICGNSCSGSGDCDVSEEGDDEEIESTWDQPCPETLPTVPYIDDEV 206
            +N I NCGI+D+ F+   + G+ + +GTSS++W              +G  D    NL+ GN++    NECVDVKEGA  N+IE N C  QLD  SGCY+SRGN+N FR N+GS CLG G+RLGG E+DGF YGV N VY N+F   G G++K   + QG ICGN+C+G  DC +  +  D+ I+ TWD  C        Y DDEV
Sbjct:  146 SNTITNCGIHDYMFESGDMNGQGVCIGTSSDEWP-------------DGEEDVCTNNLVAGNVIDTSANECVDVKEGAYGNVIEDNMCYNQLDINSGCYNSRGNDNIFRNNAGSDCLGAGVRLGGWEVDGFQYGVGNSVYDNDFNDVGFGALKIMVDGQGTICGNTCAGD-DCQLIGDYLDDTID-TWDHAC--------YEDDEV 328          
BLAST of mRNA_S-dermatodea_contig12003.1248.1 vs. uniprot
Match: A0A6H5KT05_9PHAE (Beta_helix domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KT05_9PHAE)

HSP 1 Score: 170 bits (430), Expect = 1.100e-46
Identity = 84/169 (49.70%), Postives = 109/169 (64.50%), Query Frame = 0
Query:    1 NNIIENCGIYDFRFQFDSVIGEAIYLGTSSNQWTTFPADSNYQEFAGEGYPDESNYNLITGNILTPRGNECVDVKEGASFNMIEHNECSEQLDEESGCYDSRGNENTFRYNSGSRCLGGGIRLGGHEIDGFVYGVDNIVYGNEFEGTGHGSIKSRKEPQGLICGNSCSG 169
            +N+I++CG+ DF +      GE IY+GTSS QW+             +G PDE N N ITGN +TP GNECVD+KEG++  ++E N CS QLDE+SGC+ SRG+ N FRYN+ S CLG G+R+GG E+DG  YG DN +Y N F     G +     PQG +CGNSC G
Sbjct:  158 DNVIQDCGVRDFVYGNSGKNGEGIYVGTSSTQWS-------------DG-PDECNDNTITGNTITPNGNECVDIKEGSTGTIVEENTCSGQLDEDSGCFGSRGDGNVFRYNTASDCLGVGVRIGGWEVDGHKYGQDNSIYENSFTRAESGGLSFFALPQGKVCGNSCQG 312          
BLAST of mRNA_S-dermatodea_contig12003.1248.1 vs. uniprot
Match: UPI00036AEC55 (right-handed parallel beta-helix repeat-containing protein n=1 Tax=Hahella ganghwensis TaxID=286420 RepID=UPI00036AEC55)

HSP 1 Score: 149 bits (375), Expect = 4.090e-38
Identity = 80/175 (45.71%), Postives = 101/175 (57.71%), Query Frame = 0
Query:    1 NNIIENCGIYDFRFQFDSVIGEAIYLGTSSNQWTTFPADSNYQEFAGEGYPDESNYNLITGNILTPRGNECVDVKEGASFNMIEHNECSEQLDEESGCYDSRGNENTFRYNSGSRCLGGGIRLGGHEIDGFVYGVDNIVYGNEFEGTGHGSIKSRKEPQGLICGNSCSGSGDCDV 175
            +N   NCG+YDF+F      GEAIY+GTSSNQW     D       G   PD SN+N I  N     GNECVD+KEGA +N++E+N CS Q D  S  +DSRG+ N FRYN      G G+RLGG+ +DG  YGV+N VYGN         +K    PQ  +CGN  S + + D+
Sbjct:  187 DNTFYNCGVYDFKFNNGGKNGEAIYVGTSSNQW-----DDGKNPTGG---PDPSNHNWIHHNKFLTNGNECVDIKEGAEYNLVEYNICSGQQDPNSAGFDSRGDHNIFRYNVSHDNKGAGVRLGGNTVDGRQYGVNNQVYGNLLYNNAQAGVKLMAAPQEKVCGNPTSDNTEGDI 353          
BLAST of mRNA_S-dermatodea_contig12003.1248.1 vs. uniprot
Match: A0A1Y0IFB0_9GAMM (Secreted protein n=2 Tax=Oleiphilus messinensis TaxID=141451 RepID=A0A1Y0IFB0_9GAMM)

HSP 1 Score: 147 bits (372), Expect = 2.170e-37
Identity = 77/164 (46.95%), Postives = 95/164 (57.93%), Query Frame = 0
Query:    2 NIIENCGIYDFRFQFDSVIGEAIYLGTSSNQWTTFPADSNYQEFAGEGYPDESNYNLITGNILTPRGNECVDVKEGASFNMIEHNECSEQLDEESGCYDSRGNENTFRYNSGSRCLGGGIRLGGHEIDGFVYGVDNIVYGNEFEGTGHGSIKSRKEPQGLICGN 165
            N+I NCG+YDF+F      GE IY+GT+  QW     D+     A    PD SN N + GN     GNECVD+KEGA +N+IE+N C  QLD  SG +D+RG+ N FRYN      G G+RLGG    G  YG++N VYGN   G GH  +K    PQ  IC N
Sbjct:  210 NLIRNCGVYDFQFAAGGKNGEGIYIGTAPEQW-----DNGKNPSAD---PDHSNGNWVWGNKFYTYGNECVDIKEGAEYNLIEYNACQNQLDPNSGGFDARGDNNIFRYNIAHTNTGAGVRLGGDLHQGRQYGINNQVYGNIIYGNGHAGVKVMSYPQDQICSN 365          
BLAST of mRNA_S-dermatodea_contig12003.1248.1 vs. uniprot
Match: A0A1G2MDL9_9BACT (F5/8 type C domain-containing protein n=1 Tax=Candidatus Taylorbacteria bacterium RIFCSPHIGHO2_02_49_25 TaxID=1802305 RepID=A0A1G2MDL9_9BACT)

HSP 1 Score: 149 bits (375), Expect = 7.540e-37
Identity = 79/168 (47.02%), Postives = 101/168 (60.12%), Query Frame = 0
Query:    2 NIIENCGIYDFRFQFDSVIGEAIYLGTSSNQWTTFPADSNYQEFAGEGYPDESNYNLITGNILTPRGNECVDVKEGASFNMIEHNECSEQLDEESGCYDSRGNENTFRYNSGSRCLGGGIRLGGHEIDGFVYGVDNIVYGNEFEGTGHGSIKSRKEPQGLICGNSCSG 169
            N I NCG YDF F      GE IY+GTS+ QW      +N         PDE+  NL+  N +  +GNEC+D+KEGA+ N+IE+N C  Q D ESG +DSRG+ N FRYN     +GGGIRLGG  ++G  YG +N VY N      +G I+ +  PQG ICGN+ SG
Sbjct:   25 NTIANCGAYDFLFNAGGKNGEGIYIGTSNKQWGDGKNPTND--------PDETKDNLVHHNYIDTQGNECIDIKEGATANIIEYNTCRGQKDSESGGFDSRGDGNIFRYNDVRGSVGGGIRLGGASVNGIQYGKNNDVYENTIVDNKNGGIRFQTTPQGKICGNTMSG 184          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig12003.1248.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K1D2_9PHAE3.480e-9752.48Beta_helix domain-containing protein n=1 Tax=Ectoc... [more]
D8LJ29_ECTSI6.740e-9666.94FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
D8LJ42_ECTSI1.280e-8667.16FirrV-1-B30 n=2 Tax=Ectocarpus siliculosus TaxID=2... [more]
D7FXR9_ECTSI1.370e-5051.93FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
D7FXR8_ECTSI2.340e-5053.33FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
D7FZD2_ECTSI5.740e-4846.60FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
A0A6H5KT05_9PHAE1.100e-4649.70Beta_helix domain-containing protein n=2 Tax=Ectoc... [more]
UPI00036AEC554.090e-3845.71right-handed parallel beta-helix repeat-containing... [more]
A0A1Y0IFB0_9GAMM2.170e-3746.95Secreted protein n=2 Tax=Oleiphilus messinensis Ta... [more]
A0A1G2MDL9_9BACT7.540e-3747.02F5/8 type C domain-containing protein n=1 Tax=Cand... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012334Pectin lyase foldGENE3D2.160.20.10coord: 1..172
e-value: 1.6E-9
score: 39.2
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 1..150

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig12003contigS-dermatodea_contig12003:4..3037 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig12003.1248.1mRNA_S-dermatodea_contig12003.1248.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig12003 4..3037 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig12003.1248.1 ID=prot_S-dermatodea_contig12003.1248.1|Name=mRNA_S-dermatodea_contig12003.1248.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=345bp
NNIIENCGIYDFRFQFDSVIGEAIYLGTSSNQWTTFPADSNYQEFAGEGY
PDESNYNLITGNILTPRGNECVDVKEGASFNMIEHNECSEQLDEESGCYD
SRGNENTFRYNSGSRCLGGGIRLGGHEIDGFVYGVDNIVYGNEFEGTGHG
SIKSRKEPQGLICGNSCSGSGDCDVSEEGDDEEIESTWDQPCPETLPTVP
YIDDEVPAPAPTPEEMPVAETSSPVSQLTAPTSSSGGNHRSSGCGCGVFD
LLSLHFPSATAWSRLTTSPSESKVLGGNTSSTCIGILSPQGKACCAESCG
TCGGPDCSSRSGGADSCCVSNISETAEKCSATDMVGPCLVNDGE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012334Pectin_lyas_fold
IPR011050Pectin_lyase_fold/virulence