mRNA_S-dermatodea_contig12.1247.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig12.1247.1
Unique NamemRNA_S-dermatodea_contig12.1247.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
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BLAST of mRNA_S-dermatodea_contig12.1247.1 vs. uniprot
Match: D8LJ92_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJ92_ECTSI)

HSP 1 Score: 327 bits (839), Expect = 3.490e-104
Identity = 183/303 (60.40%), Postives = 231/303 (76.24%), Query Frame = 2 
Query:  116 MRRPTRNTLLAGIWAAASVATVSADGTLAFSGDAGDVGRGGHHCHRSFPAFLWAGSNAGEQIQAGYQHAATEAHDLAAMVVDAASSAKDLEVVVIVLSQGSSFSTSGFSDANAVAVSK-ADSSLHARSATSTFPYTYPGASTLNVAVPVLAGEMGAPVQSLSLAEVVPTAVESGMLTDGKLDFVMVTVPATNTVQETDAAVHGITSTLEEASNGRFMLLWTGDMHNSGCGRRTLEAQAVFHRRLQTVALVTSSREIKMTPDILAGVLTLVLFLFIIMMGFGCVGDIECPQSFATVPPATGKEY 1021
            MRRP   TL+AG+ AAAS  +VS  G    +G A +V RGG  CHRSFPAFLWAGSN G  ++ GY HAAT+A ++A +VVDAA+SAK++EVVV+VLSQGSSFSTSG SDANA A S    S LHA+SA++TFPYTYP  +TL  A+P+LAGE+  PV +L L EVVP +   G+L DGKLD ++VTVP   T++ETDA V  +TS+LEE S GRF+ LWTGD H+  CGRR+L+A++  HRRL T +L   +R IK+TPDILAG+LTL+LFLFI++ G GCVGDIECP+SF++  PA G+EY
Sbjct:    1 MRRPASRTLVAGLCAAAS--SVSYAGRALDAG-AWEVVRGGQECHRSFPAFLWAGSNTGGNLEEGYHHAATDAFEVAEIVVDAAASAKEMEVVVVVLSQGSSFSTSGVSDANAAARSADGGSPLHAKSASATFPYTYPSPTTLRNALPLLAGELEVPVHTLPLEEVVPASASLGLLDDGKLDLIIVTVPEAATIEETDATVRTVTSSLEEKSVGRFIFLWTGDFHDEACGRRSLKAESRAHRRLATESL---TRTIKITPDILAGLLTLLLFLFILVTGLGCVGDIECPKSFSSEDPAKGREY 297
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BLAST of mRNA_S-dermatodea_contig12.1247.1 vs. uniprot
Match: A0A7S2WS17_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WS17_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 1.220e-7
Identity = 42/132 (31.82%), Postives = 73/132 (55.30%), Query Frame = 2 
Query:  632 GMLTDGKLDFVMVTVPATNTVQETDAAVHGITSTLEEASNGRFMLLWTGDMHNSGCGR--RTLEAQAVFHRRLQTVALVTSSREIKMTPDILAGVLTLVLFLFIIMMGFGCVGDIECPQSFATVPPATGKEY 1021
            G+ ++G+ + V+  VP++    +   AV  +  TLE ++ G F ++ T +   +        LE  +   RRL + +   S++ ++MTPDILAG+LT +L   I + G  C+G I+ P  F+ VPP + +EY
Sbjct:  143 GVGSNGECEVVVCQVPSSG---DAGPAVKLLVDTLERSTRGNFAVVMTLENRFALTPEFEAALEIPSAHARRLSSAS---STQGVRMTPDILAGLLTGILLTVIALTGLCCLGSIQTPTKFSDVPPPSTREY 268
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BLAST of mRNA_S-dermatodea_contig12.1247.1 vs. uniprot
Match: A0A3F2S023_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2S023_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 3.430e-5
Identity = 43/155 (27.74%), Postives = 72/155 (46.45%), Query Frame = 2 
Query:  611 VPTAVESGMLTDGKLDFVMVTVPATNTVQETDAAVHGITSTLEEASNGRFMLLWTGD----MHNSGCGRRTLEAQAVFHRRLQTVALVTS--------------SREIKMTPDILAGVLTLVLFLFIIMMGFGCVGDIECPQSFATVPPATGKEY 1021
            V +A    +L++GK D V+V +PAT ++ E DAA+   TS L  AS+G+     TG+    M       R L ++A   +    +                   S  + +TPDI+AG+L  + F+F+  +G   +  I+ P  + +     GKE+
Sbjct:  157 VASAEGQAVLSNGKTDLVVVQLPATLSLPEVDAAIQSATSILTAASHGKTAFALTGNDAEAMQIKEPIVRRLASEAKSEKSAAAIVCEAGYLVGHSAAGTAFCFSHYVNITPDIMAGLLFALFFVFLAYVGLSVLHQIQTPTRYPSHGAPRGKEF 311
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BLAST of mRNA_S-dermatodea_contig12.1247.1 vs. uniprot
Match: A0A329SEQ1_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329SEQ1_9STRA)

HSP 1 Score: 56.6 bits (135), Expect = 6.220e-5
Identity = 43/157 (27.39%), Postives = 74/157 (47.13%), Query Frame = 2 
Query:  635 MLTDGKLDFVMVTVPATNTVQETDAAVHGITSTLEEASNGRFMLLWTGDMHNSGCGRRTLEAQAVFHRRL--QTVALVTSSRE--------------------------IKMTPDILAGVLTLVLFLFIIMMGFGCVGDIECPQSFATVPPATGKEY 1021
            +L +GK D ++V +P + ++ + D A+   +S+L  A+ G+    +TG+  NS      +E Q  F RRL  Q  A  T+S                            + +TPDI+AG+L  +LF+F+  +G   +  I+ PQ + +     GKE+
Sbjct:  164 LLANGKTDLLVVQLPESMSLSDVDTAIQTASSSLNAATGGKTDFAFTGNDANS------VETQVPFPRRLAAQAKAKKTNSTTDAALLCESGYLVGYNAAGKAFCFSHYVNITPDIMAGLLFGLLFIFLAYIGLSVLHQIQTPQRYPSRGAPRGKEF 314
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BLAST of mRNA_S-dermatodea_contig12.1247.1 vs. uniprot
Match: H3H5A7_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H5A7_PHYRM)

HSP 1 Score: 56.2 bits (134), Expect = 8.340e-5
Identity = 44/156 (28.21%), Postives = 74/156 (47.44%), Query Frame = 2 
Query:  635 MLTDGKLDFVMVTVPATNTVQETDAAVHGITSTLEEASNGRFMLLWTGDMHNSGCGRRTLEAQAVFHRRL--QTVALVTSSRE-------------------------IKMTPDILAGVLTLVLFLFIIMMGFGCVGDIECPQSFATVPPATGKEY 1021
            +L++GK D ++V +P +  + + DAA+   +S+L  A+  +     TG+  +S      +E Q    RRL  QT A   SS E                         + +TPDI+AG+L  +LF+F+  +G G +  I+ PQ + +     GKE+
Sbjct:  166 LLSNGKTDLLIVQLPESMLLPDVDAAIQAASSSLNSATGSKTDFALTGNDADS------VELQHPLARRLAAQTKAKANSSTEAAILCEAGYLIGYSAAGRAFCFSHYVNVTPDIMAGLLFGLLFIFMAYIGLGVLHQIQTPQRYPSHGAPRGKEF 315
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig12.1247.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LJ92_ECTSI3.490e-10460.40Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2WS17_9STRA1.220e-731.82Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A3F2S023_9STRA3.430e-527.74Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]
A0A329SEQ1_9STRA6.220e-527.39Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]
H3H5A7_PHYRM8.340e-528.21Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig12contigS-dermatodea_contig12:51349..58487 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionexpressed unknown protein
Ec32 orthologEc-02_005230.1
Exons6
Model size1970
Cds size909
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig12.1247.1prot_S-dermatodea_contig12.1247.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig12 52295..58372 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924226.8521144-UTR-S-dermatodea_contig12:51348..522941622924226.8521144-UTR-S-dermatodea_contig12:51348..52294Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig12 51349..52294 -
1694079108.1970036-UTR-S-dermatodea_contig12:51348..522941694079108.1970036-UTR-S-dermatodea_contig12:51348..52294Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig12 51349..52294 -
1622924226.9229157-UTR-S-dermatodea_contig12:58372..584871622924226.9229157-UTR-S-dermatodea_contig12:58372..58487Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig12 58373..58487 -
1694079108.2691808-UTR-S-dermatodea_contig12:58372..584871694079108.2691808-UTR-S-dermatodea_contig12:58372..58487Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig12 58373..58487 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924226.8622444-CDS-S-dermatodea_contig12:52294..525111622924226.8622444-CDS-S-dermatodea_contig12:52294..52511Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12 52295..52511 -
1694079108.2061446-CDS-S-dermatodea_contig12:52294..525111694079108.2061446-CDS-S-dermatodea_contig12:52294..52511Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12 52295..52511 -
1622924226.8709333-CDS-S-dermatodea_contig12:53100..532101622924226.8709333-CDS-S-dermatodea_contig12:53100..53210Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12 53101..53210 -
1694079108.2152302-CDS-S-dermatodea_contig12:53100..532101694079108.2152302-CDS-S-dermatodea_contig12:53100..53210Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12 53101..53210 -
1622924226.8795617-CDS-S-dermatodea_contig12:53634..537841622924226.8795617-CDS-S-dermatodea_contig12:53634..53784Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12 53635..53784 -
1694079108.2251325-CDS-S-dermatodea_contig12:53634..537841694079108.2251325-CDS-S-dermatodea_contig12:53634..53784Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12 53635..53784 -
1622924226.8958724-CDS-S-dermatodea_contig12:54350..544851622924226.8958724-CDS-S-dermatodea_contig12:54350..54485Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12 54351..54485 -
1694079108.2369142-CDS-S-dermatodea_contig12:54350..544851694079108.2369142-CDS-S-dermatodea_contig12:54350..54485Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12 54351..54485 -
1622924226.9066114-CDS-S-dermatodea_contig12:56035..561431622924226.9066114-CDS-S-dermatodea_contig12:56035..56143Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12 56036..56143 -
1694079108.248846-CDS-S-dermatodea_contig12:56035..561431694079108.248846-CDS-S-dermatodea_contig12:56035..56143Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12 56036..56143 -
1622924226.9147644-CDS-S-dermatodea_contig12:58183..583721622924226.9147644-CDS-S-dermatodea_contig12:58183..58372Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12 58184..58372 -
1694079108.2582362-CDS-S-dermatodea_contig12:58183..583721694079108.2582362-CDS-S-dermatodea_contig12:58183..58372Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12 58184..58372 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig12.1247.1

>prot_S-dermatodea_contig12.1247.1 ID=prot_S-dermatodea_contig12.1247.1|Name=mRNA_S-dermatodea_contig12.1247.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=303bp
MRRPTRNTLLAGIWAAASVATVSADGTLAFSGDAGDVGRGGHHCHRSFPA
FLWAGSNAGEQIQAGYQHAATEAHDLAAMVVDAASSAKDLEVVVIVLSQG
SSFSTSGFSDANAVAVSKADSSLHARSATSTFPYTYPGASTLNVAVPVLA
GEMGAPVQSLSLAEVVPTAVESGMLTDGKLDFVMVTVPATNTVQETDAAV
HGITSTLEEASNGRFMLLWTGDMHNSGCGRRTLEAQAVFHRRLQTVALVT
SSREIKMTPDILAGVLTLVLFLFIIMMGFGCVGDIECPQSFATVPPATGK
EY*
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mRNA from alignment at S-dermatodea_contig12:51349..58487-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig12.1247.1 ID=mRNA_S-dermatodea_contig12.1247.1|Name=mRNA_S-dermatodea_contig12.1247.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=7139bp|location=Sequence derived from alignment at S-dermatodea_contig12:51349..58487- (Saccorhiza dermatodea SderLu1190fm monoicous)
ACGGTCACAGCACACGGCACAAAGTCTGATTGCTTCGCTGATTAGGGTAT
AAAGGAGACGGGCTGAGAGCAGGGCGGAGAACACTCTAACGCTTAGCGCG
GGCTACTACCGTACCATGCGGCGACCGACGCGCAACACGCTGCTGGCGGG
GATTTGGGCGGCGGCCAGCGTGGCGACTGTCTCGGCTGATGGAACACTCG
CGTTCTCGGGAGATGCTGGGGATGTAGGTCGAGGAGGCCACCATTGCCAC
CGCTCCTTCCCTGCGTTCCTGTGGGCTGGGTCTAACGCGGGAGAGCAGAT
TCAGGTGAGACGACTTCAGTGCGTGCTGCTGTGCACCGAGGCCGTCAGCT
GTGTTGACTTTATTTCGCTTCGCTTTGTGCTGCACCAGAGTCTCCTATTT
CGTGACGGGGGGCCCGAGAGCAGAGAGGTTTGCCATGACCGCTATCAGGG
AATGACTGCGTCCCTGTGTAACACCGCATGGCCCGGCTTCTGGCACGAAC
GTACCCTCCTCCGTGCCTGCCGGGCGGCCCATTCACCCTATAGCTCGCCA
GGGCTCCCTCTGCATCAGTTGCCGGCTGCTGCCGTTGTCTAAACGCTGCT
TTTGTGTATATATATATATTATAGCAAAGCCGTGCGTACTCTCCATATCC
GCGCGGAACCATAATCGTAAAGATTTTAACCCAGCGTGACTTTGTCTCAT
CGTGGCGTGAAGCACCCGCGAAGCCCGCCACGATGGCCTTCGATGAGCAC
ATTGGGTGTCGTTGGATGCTTGCCGTATCCACGTCCGTCTTGAACTTGTC
CAAATCGACAACGCGCTGCGACTAGTATATGCTCCCCTTTTGCGGGGCGT
TATTTACGTAAGATTCTTATTATGGCATACGGACAGAGCGAGGCAAAAGA
GCGGAGCTGCCGCGTGCGCGATAGCAGAGGCGTCGCGGCTGCAGCAGTAG
CAGAAACGGGATGCCACGGTGTTGATGGGTGCATGTGCCCACCCTGGCTT
GCTGGCGAATGCCGTACCGATTTCGTTGCGGTGTGTCCCACGACAGCGAC
GAGTGATCACGCGCCAAATTGGTATGTTGCTAAAAACCGAACGAGCGCTC
TGTGATGATCCATATCATACTGAAGAGGCCTGAAATTGCATGTTTTACCC
AAACACCAAACACGCCACGGAGCTATAATAGCTCTACTATCATATCATAC
ACCAGTATGATTTATAGTAAGACTACCTGAAGAGGTTGAGTCGCAGGATT
CGACACGCACTGTCGTGGACGTGCTGGAGAAGCCCATCGTTGTTTTGTTT
TCAATCGCGGCGGCGCTCCGTGGAATACCATTCGCCGGAGCGGGTTCTTG
GGAACAAGAGCTGTGTGGTTTTCTGTTTGCAGCGATAAAGGGTGATACAA
GGTACAGAGTATATAATCCTGATACATAGTAGATGGCTCCATCAATGCAC
TGATGACGATCGTGGTTCGTGTGGGGCTCCCACTTGGAGAAGGCAACCCG
CCCGTTTGTCTACCAGCTGCAGCACAGCTGGGCAGGACATCTGTTCTCTC
GCATATTCCTTGCTGGCTGAAACGGCTATCTTGATTGCGATGACCTGGCC
ATATTCTCGTCCCAGTTCCTCCTAGCGATGTGTTGGTATTGTCCAAAGCT
CCCTACAACTTTGCCGCTTCGCAGCAAAACACAGCAAACAATCGCGCAAA
CAAAAGTAAAACCAAAGTTAAACGGCAGCGGGCGTTCACGTTCCGCCAGG
CGTTTTCAGCTCCTCCGATCAGGCGGTATTATAGCCTGCTCAGTGCAATC
CAATCTTGGGTGGACCTTGATTTGCTCATCTCTCCACCTTCCCGACCCAC
TCAGGAGGCGTCTGCACAAGCGGGCGTGTCGAGGGTGTCGGATATGTCGA
GCGAAATAATGTAAAGTACTTCGAAGTATGTGTTTATCGTCCTTCCCAAC
CATCTATGCAAGTACCTACCTACCTAACTGTGGTTATGTCAACATCCACA
AGAGACTGCTCTCCACTTCTACCATGCATACCAGCTCCAGCTCTAGGCCG
GTGGTGATCTTGGCGTGCCAGGTTTTTGTAGAGGCATAGTGCCCCCAAAT
CTTCTACTATAATATGAATACTGTATTATAATGTCGTTTGATGTACTGTA
CGCATTTGTCATGAAGCCTCGGAGATGCCGACATACCAGCGCCGCTCTCG
GTTTGTGAGCACCATTTCACATGTTACATATGCGCTCCCTATTTGCTATT
TGCTGTTCTGGGTTAAGTTGTACTTGTTTTTGTATTTTTGTGCCAAACTG
CTGTTGGATTTGTTGCCGTTACGCCGCACCCCGCGTCCGAGCAGGCTGGG
TACCAACACGCGGCGACAGAAGCGCACGATCTTGCCGCCATGGTGGTGGA
TGCTGCCAGCTCGGCGAAGGACCTCGAGGTCGTGGTGATTGTGCTGTCAC
AGGTGAGGCATTTTTCGGCTCTCGTGAGGACCATCATTTGATGATTTGTC
TACAATGCGATATTTATTCATACAGGGTACTTATCATGTGTATCTGTACA
ACACCCGTACAGGTAGAGCTGTACCGCCCTGAGGCGTGTTTCGACTCTCG
TGGGGACCACAATTAGATAATTTGTCTACAAAATGTATGCATACTTGTAC
AAGGTATCAGACACTACCATATCTGAACGTACCTGCACAACACCCTATCA
GGTACTCATAAAACTGTGCCGCCCTACCTGATAGGAGGGTGCACCTGATG
GGAAGAGCGTGGTTAATTCTAATCGACAGAGGAGAATGGTTATGGTTGTG
ACCAATAATATCCACCCTTACAGAGTAGGGTTCTATCGTATTGGTAGTAA
TAGTATAGATAGAGGCATCCAGGGCAGTAGCCCGTTCGTCGCCGAAGTTG
TGCGAATACATTTTGTTCCTACCAATACCTCACAGCACTCGAGAACACTA
AAAAGTGTAGCGCCCCACTTTTTTGGGCATGGCCGATCGCGAAACGACGA
TGTTGGACGTGTCTGCGTGCTGGAACATAATGCGATGGGCGGGCATGGAA
AAAGCAATCGCGGTAGGCTGCACTGAATCTAGAAAGCCCACCCCTTACTG
GAATATTTAATTTGAAGCACAGAACGAGGAGGAATCGGTATTTCGCTGCT
TTCTCGTCTATTTCGGAGGTACTGTACACAGCAATCAGGACCAAATGCGT
CAAATAGCAGTACAACTACAGTATACCCAACACAATATTCCAGAAATCAA
GATCGTCTGGCCTTACAAAATCTGCAATCTTGCGGCCTGAATTGTCAATT
CAAAACCGTATGCTTTTGTTTTTACAAGGTGTTCAGGCCAACGCTTAAAA
AATCAAGACTTGAACACGCTATTAAGCACAAATTTGGTCTTGATTGCTAT
AATACTATAATACTACTGTATACCTCCGTAATAGCTTTTATGCTCAATCC
TTTACAGTAGAGAGCCGTGGTCAGTTGGAGGTGTCCGGGCCAATGTTTAT
ATTGCCGTAAAAAACACTTGCGGTTAGCGCCGAAGGGACGGCGGCAACAC
GGCTCTGAAGGCGCGGCAGTTAGTTGCACGGTGATTGGTTTGTTCACCTG
GTGGGTTTTGCTCCACTTGAATCACGACGGACGCGACCCACCCATGTAAA
GGGCCTAAATCGAAATAGAACAGAACGCAGCTCAAGACGTGCACGACTGG
TGATGTAAACAATTGTCCGCTCGGCTCTTCCCGTGTTTTCGTGCGGGGGT
GGCCAAGGCGGAAGAACCCTTGGACACTATGTACATTCTGTTTTAGGCTT
GCTGGAAGCCACGCCAATGCAAGTCAAGTCAAGATGCGTTGAACCTTATT
TTGGAAGCCGCCATATCGCATCGAAGCTTCTCGATTAATTCTCAAGCGCC
ACCTGTTTTTTGTTTTTTGCACTGCAAATGCCGGGCGGTAAAATATACCG
ATTAAAAAACGCAACAAGCGCCACCTGTCGCCCCAACCACACAATCACAC
AGGGGAGCTCGTTCTCGACCTCTGGATTTAGTGACGCGAACGCCGTAGCT
GTTAGCAAGGCCGATTCATCTCTGCACGCAAGATCGGCCACCTCCACGTT
CCCGTACACCTACCCCGGCGCCAGCACCTTGAATGTGGTGAGTCCAGCCA
AGAAGACCCGTTCATATTATAGGAGCATGCAAAGAGGAGCATGTCAGGTT
TGCAGAAATTGCGATGTAGACGGCGTCGGTCGGTGGAGTCTCTGGTCGCT
CGAGTTTTGATGACTTGATCAATCTACGTTGGGCTTGTCGAGCTCTCGCT
GCGTGTTCGAAGCTACACGTACCAACCAAGAGTGTAATGGCGAAATAGTT
CCCTTAGCATGCTTGTAGTTTTTTTTCTCTATTTAGTATGATAGCGTGTC
TTTCTCTGTGTCGCAGTGGGCAGCTTACGAAATCAAACCCAGCCAGGGGG
AGTAGTGGAATCAGCGCGAAATGTACTCCTTCGGGTAGTTCCTTGCGCTT
GCTGTCTTACGTTTGCGGGATAGCTTGCTCATGTGGTGTGTACGTCCGAG
ATAGAGCAGTACTGTCCATCTTTGTCCCTCCACCGCTGCATAGATGCGTC
GGGTTTGCCTGTATACGTACGTGGGTAGTTTTATCATACACGCACGCCCC
GCTGCTGTTAGCCCCAACGTTTTATTGGCTGTTTGGTCGTGTGCTCTGGC
CAGGCCGTGCCGGTTTTGGCGGGAGAGATGGGGGCACCGGTGCAGTCTCT
CTCGCTAGCAGAGGTTGTGCCCACCGCGGTGGAAAGCGGCATGCTGACAG
ACGGCAAGCTGGACTTCGTTATGGTCACCGTGCCGGCGACCAACACCGTG
CAGGTGCAAAGTTACAGACTCTCTTGCGTGGTATGTTTCATGCTGGTTCG
AGACCATTGGCACCCCGGATAAAGCTCGAAGTCTGGTGCTCACCACATGT
GGTTCGTTTCGCCACCGCGTGAGATGAAAACGGGCCATCAACTTGGAACT
GGGTGCGCCATCACCTTACGTTTCCCCCCTGTGCGAAATTTCCCGCTCAC
TGTATTCGCACTTGGGCATGTACGTAGGAGAGCGATACGCTCGTAAGTCT
TCTCGCGTTTGTCTTCAGGCGTCTTGTTTGCTCACGTAACGGTGGTACCT
GTAGAATTATACCTGCAACACGCCAAGCAAGGTGGCGTCAGTATTTTGTT
TTCGCGCTTTTTTGGATTGTGTTGTTCTTGTGTTTCTCGATGGTGTGTGA
CTTCGCCACCTCTCCCGTACCTACCAGGAGACCGATGCCGCGGTGCACGG
CATCACCTCCACCCTGGAGGAGGCCAGCAACGGCCGATTCATGCTCTTGT
GGACCGGAGACATGCACAACTCAGGCTGCGGTCGCAGGTAGGCTGGAGGA
GATGGTCATTGTGGCCGAGGGTCCTGGCAGTGTTGGCGTGCTTCGCGAAA
GTGGGGGAGGGGAGCTTCTTGCGGCCTTGCGGGAAAATGATGCGAGATTT
TCGCCACTGGTTTCACGACGTTGTCTCGACCGACCTATGTACGCGTGTTT
ACATAGAATACCCACGGTGTAGCGTGGGGCTGGGGGAAAACTGCCCACAC
GGTGTCGCATACATTTCCTTCGTTTTAAAGAGATGCGTGCCTTTTACATC
GGAGGTACACTGTTACCAAATAATCAGGACCAAGTTCGCCAAACAGTATG
ATATGCCCAACATAACAAACCAGAAATCAACATGAGCTGGCCTTACAACA
TGTGCAGTCAAAATCTTGCGGCCTCAAGTGTAAAATCTAAAATATGTATT
TTTTGTCACGCAATGTGTTCGGGCCAGCGTTGAAGGGCAAGACCTGGATA
CGCTGTTGAGCAGAAAATCTGTCCTGAATACCGTGCTCCTTCGTTATACC
GGAGTAGTAAATAGCACAACTCTTGCCCAACCTACGACCTTTGGCTACCG
ACGCACTCGGCGTACCGCCCTTGCAGGACGTTGGAAGCACAGGCTGTCTT
CCACCGCCGCCTGCAGACCGTGGCGCTCGTAACCAGCTCGAGGGAGATCA
AGATGACGCCCGACATCCTGGCGGGAGTTCTGACTCTTGTGCTTTTCCTC
TTCATCATCATGATGGGCTTCGGATGCGTGGGAGACATCGAGTGCCCGCA
GTCGTTTGCGACCGTACCGCCGGCCACTGGCAAGGAGTACTAATTTGATG
GCCTGCTGCGCGTGGGCCCTTGCGGATTGCGTCGTGGTGTGCTGCAGTTG
TTTTCTCGTGTATGCTTCGTTTTGTTTTTGTGTTTCCTTTCCTCTTTTTT
GTGAAGTGCAGTTCGGCGCTGTCGGCAGTACGCTATAGGCCGATGTGGCC
CGTGTTTTAAAGCTGCTATGCCGGGCAGGGGCAGTTGGTTGCGTCGTTGG
AGGTAGGTGGAAATCGTTTCCCGTCTTTGCACAGCACGTGTAAAAGCGAA
TTGGCGGGCGCGGCGAAGGTGGGGTTAGTAACCTTCCTGTTGTTCTTTCT
TGGAATCGACAGCGACGGTTTCTTGTCGCAAGAGTATGTTACTGTAGAAG
GTGTTGAATGCTGTCTCACGGGACGGCCGAGGCTCCACGGGTGTTGAAGG
AAACAGCCCCGGGGAGGATCGGTGTCTTTTTTCTATCTTGAGAGGTGCAC
CACGGCGTTCAATATCCCTTGAATATCCCGGAGCTGACCGAAGTCAAGAA
CTCACACTTCCGTAGTCCAAGCGTCGCAATTCCGTTGCTATTGTGACCAA
ACGAAGGCGATCGCGCCCGTGGAGGCCCTTCTGTAGCATGACCGATTCGA
CCCAAAGTTCAAAGTTTTGAAAGTTCAATCCGATTGTTTTGCCCTTGACG
CGGAGTTGATCGACCCCCTCCCCCTCCCCCACTCCCCCGCCTTCTCCGGC
TGGCGTCGCAAACGCAAGGATACTGGCTAGCAGCTTGTATCAATCGTTGT
GAAACACCGAGTGGCCGGCGAAAACCCGGCGTATCGCTCCGTCGCGGAAT
TGTTTAGATGCGTGGTCTATGTCCGTGTGGATACGACATGCGTTGCCGTA
ATAACCCCCCCCCCCCCGGCGCCTTCTCCAGGTTTTTATAAGAACGTCGC
TTCCACTGCTATGTCTCTTACCTCTATTCAATTCTCGTC
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Coding sequence (CDS) from alignment at S-dermatodea_contig12:51349..58487-

>mRNA_S-dermatodea_contig12.1247.1 ID=mRNA_S-dermatodea_contig12.1247.1|Name=mRNA_S-dermatodea_contig12.1247.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1818bp|location=Sequence derived from alignment at S-dermatodea_contig12:51349..58487- (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGCGGCGACCGACGCGCAACACGCTGCTGGCGGGGATTTGGGCGGCGGC
CAGCGTGGCGACTGTCTCGGCTGATGGAACACTCGCGTTCTCGGGAGATG
CTGGGGATGTAGGTCGAGGAGGCCACCATTGCCACCGCTCCTTCCCTGCG
TTCCTGTGGGCTGGGTCTAACGCGGGAGAGCAGATTCAGATGCGGCGACC
GACGCGCAACACGCTGCTGGCGGGGATTTGGGCGGCGGCCAGCGTGGCGA
CTGTCTCGGCTGATGGAACACTCGCGTTCTCGGGAGATGCTGGGGATGTA
GGTCGAGGAGGCCACCATTGCCACCGCTCCTTCCCTGCGTTCCTGTGGGC
TGGGTCTAACGCGGGAGAGCAGATTCAGGCTGGGTACCAACACGCGGCGA
CAGAAGCGCACGATCTTGCCGCCATGGTGGTGGATGCTGCCAGCTCGGCG
AAGGACCTCGAGGTCGTGGTGATTGTGCTGTCACAGGCTGGGTACCAACA
CGCGGCGACAGAAGCGCACGATCTTGCCGCCATGGTGGTGGATGCTGCCA
GCTCGGCGAAGGACCTCGAGGTCGTGGTGATTGTGCTGTCACAGGGGAGC
TCGTTCTCGACCTCTGGATTTAGTGACGCGAACGCCGTAGCTGTTAGCAA
GGCCGATTCATCTCTGCACGCAAGATCGGCCACCTCCACGTTCCCGTACA
CCTACCCCGGCGCCAGCACCTTGAATGTGGGGAGCTCGTTCTCGACCTCT
GGATTTAGTGACGCGAACGCCGTAGCTGTTAGCAAGGCCGATTCATCTCT
GCACGCAAGATCGGCCACCTCCACGTTCCCGTACACCTACCCCGGCGCCA
GCACCTTGAATGTGGCCGTGCCGGTTTTGGCGGGAGAGATGGGGGCACCG
GTGCAGTCTCTCTCGCTAGCAGAGGTTGTGCCCACCGCGGTGGAAAGCGG
CATGCTGACAGACGGCAAGCTGGACTTCGTTATGGTCACCGTGCCGGCGA
CCAACACCGTGCAGGCCGTGCCGGTTTTGGCGGGAGAGATGGGGGCACCG
GTGCAGTCTCTCTCGCTAGCAGAGGTTGTGCCCACCGCGGTGGAAAGCGG
CATGCTGACAGACGGCAAGCTGGACTTCGTTATGGTCACCGTGCCGGCGA
CCAACACCGTGCAGGAGACCGATGCCGCGGTGCACGGCATCACCTCCACC
CTGGAGGAGGCCAGCAACGGCCGATTCATGCTCTTGTGGACCGGAGACAT
GCACAACTCAGGCTGCGGTCGCAGGAGACCGATGCCGCGGTGCACGGCAT
CACCTCCACCCTGGAGGAGGCCAGCAACGGCCGATTCATGCTCTTGTGGA
CCGGAGACATGCACAACTCAGGCTGCGGTCGCAGGACGTTGGAAGCACAG
GCTGTCTTCCACCGCCGCCTGCAGACCGTGGCGCTCGTAACCAGCTCGAG
GGAGATCAAGATGACGCCCGACATCCTGGCGGGAGTTCTGACTCTTGTGC
TTTTCCTCTTCATCATCATGATGGGCTTCGGATGCGTGGGAGACATCGAG
TGCCCGCAGTCGTTTGCGACCGTACCGCCGGCCACTGGCAAGGAGTACTA
AGACGTTGGAAGCACAGGCTGTCTTCCACCGCCGCCTGCAGACCGTGGCG
CTCGTAACCAGCTCGAGGGAGATCAAGATGACGCCCGACATCCTGGCGGG
AGTTCTGACTCTTGTGCTTTTCCTCTTCATCATCATGATGGGCTTCGGAT
GCGTGGGAGACATCGAGTGCCCGCAGTCGTTTGCGACCGTACCGCCGGCC
ACTGGCAAGGAGTACTAA
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