prot_S-dermatodea_contig12.1245.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig12.1245.1
Unique Nameprot_S-dermatodea_contig12.1245.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length1594
Homology
BLAST of mRNA_S-dermatodea_contig12.1245.1 vs. uniprot
Match: A0A6H5K7Y3_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7Y3_9PHAE)

HSP 1 Score: 519 bits (1337), Expect = 3.920e-154
Identity = 516/1451 (35.56%), Postives = 670/1451 (46.18%), Query Frame = 0
Query:    8 LAPALAKAMRLDSAQAREQAAAAAHGLLGNAPRAMKQCASLSEAATEEEEGELWLPCLLRLCLDDCIGVRAEALKAAKRAVRCVGR--NATVAAWVLKRVNSRELFHDMDRVLYHHEAS----STGPAPPRPPPLAERNTSQPSPAAASIIGKTKGKRAPSAARVKHAMMAWAVHLSLADFGGLT-ARESSGDVNAYERSTNKFLAVSGRFKDPRPTVREAAVEAWGMFACTCLSDVSRRQAPKVADISVRPLMMGVLRETDARVRQAVLSSLARCVASSQPHSIKHLWKLQEKLEKAGKVGLAELIRRLAGGSHGADALHFSARMLAGLLPSFHTISGG-HPSLRQAGLALTVEVSPLLSTLQTLMKAIPPPCPEMAIPVGTAASPPKPGAPVSS-------------LDALPTWSLIARAWCGLALWAVSERSAC---LKGIAGGSGARGDV-----PTSDGGEKGKGKVG----DNRKGEETPSGT------ETGENGKTKPLSSVLDWLLSGVAPAESGS---------EAVPVAPTCTSSSSPAVDNAGAPSGTIGGLAEWKRVLLAGFVRALSSQSSFKPPREVLEGGHLDI---CQVRAWLDAPV-TTSFFDARLRGASREERAAGSSCPDCAMAEDVRDTVFTGCCGAGISSEQSVLPCRRERDHEGATPRECPLWLALLLGVLGGRCGRRSHEEQGGHLPP------LVQCTCIGGSSRAGDIESTGNSRHP----------YLPETVLAEVLDLSPGGAPAKLLSSLSRRLSTLPVERAGGKSDGEMRDELARRRSSILLALARVWRAEASRNISAWK---PLSRSPAVADTAAAAAF-GGFQA--PLNER-ESSDVSP--------ALGIGAEQ------------RPDDGLLERTADTLRLLLKAVTHFVVRSPP-DTRDL---PLGDSAPERREAAGGADGTAQSAEARRLSDRRGHDVFGA-------------IEEAFGGQAAALWRDLFEARRGHRS---GFPNLLKKLAKDCATLALCSAPVESVAESAASGKGEGLASHASSDIDGKLAAWGFAFSQSQPT-------------QRDLEEEA------RRRGRGAVAWQGKS----PRALGQDGSNGQDLAPPPPLASLPILAAVTLSLFHVSRKEAGT-TRSRAWGAGLATLAWVLTSTTSTSTETAQPP----------GGVGVAPSTESKRTPAVDGVITNLVTVRSAVASG-------------DRARTESDFEFPLDEDSLTPVSRFAAVGVSRSWAVQ------------GPSPRKGQCV----------------ASHPEAREEIRALVVGVLAVVRGLPRNVVASPGLLLALSPMLEAILDMPRSS-EADAIQSALLDTWNHTFGNL----PGGRLWESSFPPALLRCLARMAGRAEVKMPPGMAFQTDSAEALP 1263
            LAPA+A+ MR++S  AR+Q+A A H LLG+ P AM +C     A   EEE   W+ CLLRLC DD + VRA+ALKAA+RAV   G   NA +AAWV++ +    L   M+RVL++  +S    +T  A     PL   + S  SPAAAS   KT  ++A +  RVKHA+  WAVHLSLAD   L  AR+++G     +  T  F  + G+  D R  V+  AVE+W MFA + ++ + R +A KVA + +R L   VL+E    VR+  +SSL R VAS    S+K LW    K +K  K GL E++R +AGGS G  A H SAR+LA LLP F       HP LR AGL L  E+  LLS L+TLM+A P P PE A     AA+P       SS             L+ LPT  LIA AWCGLA WA+ + +A    ++G   G     D         DG  KG G       D RK    PS +      E   +  ++PL  +L+WLL   A   +G+         +AVP   T       A ++A +P  T   LA WK  LLA  +R LS +   +      E G  D       RAWLDAPV ++S FD RL             CP CA            C  AG    QS+               E PLWL LL GVL GRCG       GG          +V+  C  G+ R     +T  +R            +LP++ LA  L LSPGG PA+LL+SL           A G++  E  ++LA      L+   RVWRAEA+RN++ W    PLS    V   AA A F GG Q   P  +R +   V+P        A G+  ++            +P   L   TA+TLR  L A        P  +TR     P G +       +  A  T    E   ++D  G+   GA             +E  FG +AA LW  LFEARR   +   GF  L+K L+KDC   A        VA     G G+G A    S       AWG  FSQ+QP              QR+  + A      +  G  A+ +  +S    P    Q+G  G  LAPP P  +LP+LAA  L+L   +  EA    R RAW AG ATLAW LT+  +    TA PP             G+A   E    PA   V   L  V S +                +R+ +     FPLD DSL PV R  AV V  S++              GP    G  V                A+ P  R EIR LV   L+      R V ASPGLL ALSP+LEA+LD+P SS +AD++QS+LLD WN TFG L    P    W+++F PALLR L+ ++ RAEV+MPPG+        A P
Sbjct:   75 LAPAVARTMRMESTVARQQSAMAIHSLLGSVPGAMARC-DPGRADRPEEEDSFWVRCLLRLCFDDAVKVRADALKAAERAVSLGGLRGNAGIAAWVVEALRDGRLSQGMNRVLFYDASSQSQAATTAAAGGADPLPHASGSS-SPAAAS--DKTNPRQA-TPQRVKHAIRVWAVHLSLADPASLLRARDTAGKKRLLDVGTGLFTWLCGKSADGRDDVKVQAVESWEMFAVSMMAQIGRDEAKKVAHMFLRALSRWVLKEKGV-VREVAMSSLMRVVASFPSISLKPLWTTTWKGDKKSK-GLGEVLRDVAGGSSGEIARHHSARVLAALLPCFCLRPAEPHPLLRDAGLNLDEELPLLLSMLETLMEAFPSPIPEDAASAVDAAAPXXXPXSXSSRGAEEENCCADVRLEVLPTTGLIANAWCGLAFWAMEQAAAAGLDVEGTGKGKSGAADAGEFASDNQDGSGKGHGNTAAAASDCRKEGSGPSSSSAAPPQENEASETSQPLQVLLEWLLGVRARPSTGTSAKVTTVTEKAVPGGSTAEGRGKAAANSASSP--TTDRLARWKEALLAALIRGLSRRLDVQDNEA--EAGADDANAKLPGRAWLDAPVDSSSVFDGRL---------CAGDCPACAE-----------CLPAGGVIRQSI--------SRKWLKSETPLWLVLLTGVLRGRCGLEYRCLDGGXXXXXXXXSRVVREACHKGNPRHESGSATDGTRGGGESACQFSPVFLPQSFLAGALSLSPGGWPAQLLASL-----LTGARSAKGRTQEE--EDLA------LVVAGRVWRAEAARNLAEWNRCLPLSTDSYVG--AAGAGFDGGVQGVTPGGDRYKGGPVAPHARTVGTSAAGVDVQKXXXXXXXXXXXXQPSKNLRTDTANTLRFSLHAACSLFSHPPEGNTRSQSKEPKGATGQACDLESRAAGSTGVQNEGAAIADHDGNLRGGASGGWSEGGKRSVAVESFFGAEAARLWLGLFEARRNSPAQPKGFSKLVKALSKDCGNCAF-------VASWGPLGGGKGGAGEGGSSAVPPPGAWGLDFSQTQPPXXXXXXXXXPRTGQRESGDFASSMQGDKTAGAAAMRYDKRSNTDHPEGKKQNGG-GDALAPPXPFVALPVLAAAALALLTAAPAEADAKARGRAWKAGSATLAWTLTAAAAAPGTTAWPPPASXXXXQWSSAAGLAAGEEGATVPAE--VCQCLCAVHSCLKVAAXXXXXXXXXXXLNRSSSSGTAGFPLDGDSLAPVCRLLAVAVRTSYSTAXXXXXXXXXXDAGPESSSGSLVRASFSSSTASGTEVVVAADPAVRLEIRGLVACALSA----SRKVAASPGLLTALSPLLEAVLDVPSSSCDADSLQSSLLDVWNATFGKLNLKQPPAPAWKAAFSPALLRRLSDLSRRAEVEMPPGITLPVLDTAAAP 1457          
BLAST of mRNA_S-dermatodea_contig12.1245.1 vs. uniprot
Match: D8LJ95_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ95_ECTSI)

HSP 1 Score: 246 bits (628), Expect = 3.830e-62
Identity = 248/684 (36.26%), Postives = 317/684 (46.35%), Query Frame = 0
Query:  852 ERREAAGGA--DGTAQSAEARRLSDRRGHDVFGAIEEAFGGQAAALWRDLFEARRGHRS---GFPNLLKKLAKDCATLA--LCSAPVESVAESAASGKGEGLASHASSDIDGKLAAWGFAFSQSQPT--QRDLEEEA------RRRGRGAVAWQGKS----PRALGQDGSNGQDLAPPPPLASLPILAAVTLSLFHVSRKEAGT-TRSRAWGAGLATLAWVLTSTTSTSTETAQPPGG----------------VGVAPSTESKRTPAVD----GVITNLVTVRSAVASG------DRARTESDFEFPLDEDSLTPVSRFAAVGVSRSWAVQG---------PSPRKG---------------QCVASHPEAREEIRALVVGVLAVVRGLPRNVVASPGLLLALSPMLEAILDMPRSS-EADAIQSALLDTWNHTFGNL----PGGRLWESSFPPALLRCLARMAGRAEVKMPPGMAFQT-DSAEALPAFN-----REEVVDEGD----------------GVEAEATRVPQGDALGVAQLSSAG-------------FEINVAGTLPAAGARRSFMRQAQGSPA---NNATPTSKKRPPS-TIHKAPATGSKFVRVVGSGRGSTGRR--PTKRAAITTHTSLDGSQVLEPWENGSQLPDTEPDSGAEDFFPEEELFPAQGRSG 1419
            E REA G A  DG  +  ++R  S  +G     A+E  FG + A LW  LFEARR   +   GF  L+K LAKDC   A  +   P+                  A   +D             QP   QR+  + A      +  G  A  +   S    P    Q+G  G  LAPPPP  +LP+LAA  L+L   +  EA    + RAW AG ATLAW LT+                               GVA   E    PA      G + + +TV  A A+       +R+ +     FPLD DSL PV R  AV V  S+A  G         P P  G               + VA+ P  R EIR LV   L+      R V ASPGLL ALSP+LEA+LD+  SS +AD++QS+LLD WN TFG +    P    W+++F P+LLR L+ ++ RAEV+MP G+     D+  A P        R   + EG+                G EA     P+  A+G  + ++AG             +   VAG LPA G RRSFM+QA  SP+   ++   T KKR PS T         KF+RVVG+GRGS G R  P +RAA+TTHTSLDGSQ + PWE+GSQLPDT PDSG  D   EE L P   RSG
Sbjct:  637 EAREAVGVAEHDGNLRGEDSRGWS--QGGKRSAAVESVFGAETARLWLGLFEARRNSPAQPKGFSKLVKALAKDCGNCAFVVSGGPLGGXXXXXXXXXXXXXXXXAVWGLDFSQTQPPSQXXXXQPRTGQREPGDFASSTQGDKTAGAAATRYDKCSNTDHPEGKKQNGG-GDTLAPPPPFVALPVLAAAALALLTAAPAEADAKAKGRAWKAGSATLAWTLTAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAGVAAGEEGATIPAEVCQCLGAVRSCLTVAVAAAADSAGGGPNRSSSSGTAGFPLDRDSLAPVCRLLAVAVRTSYATAGGAAAAADAGPEPSPGSLIQAAPSSSTAVGIEVVAADPAVRPEIRGLVACALSA----SRKVAASPGLLTALSPLLEAVLDVSSSSCDADSLQSSLLDVWNATFGKINLKQPPAPAWKAAFSPSLLRRLSDLSQRAEVEMPRGITLPVLDTVAAPPTATTAQGLRGSGLSEGNKGAEGGGIAVEESARGGSEARDYSQPESAAVGDLRAAAAGGGGARGRASSGCAWNGGVAGALPAKGGRRSFMKQASRSPSPSQSHPVATPKKRSPSPTSPDGGGFSGKFIRVVGNGRGSGGNRGTPKRRAAVTTHTSLDGSQSIAPWEDGSQLPDTNPDSGP-DLPLEEVLPPPPPRSG 1312          
BLAST of mRNA_S-dermatodea_contig12.1245.1 vs. uniprot
Match: D8LJ94_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ94_ECTSI)

HSP 1 Score: 162 bits (411), Expect = 1.640e-39
Identity = 110/264 (41.67%), Postives = 152/264 (57.58%), Query Frame = 0
Query:    8 LAPALAKAMRLDSAQAREQAAAAAHGLLGNAPRAMKQCASLSEAATEEEEGELWLPCLLRLCLDDCIGVRAEALKAAKRAVRCVGR--NATVAAWVLKRVNSRELFHDMDRVLYHHEASST--------GPAPPRPPPLAERNTSQPSPAAASIIGKTKGKRAPSAARVKHAMMAWAVHLSLADFGGLT-ARESSGDVNAYERSTNKFLAVSGRFKDPRPTVREAAVEAWGMFACTCLSDVSRRQAPKVADISVRPLMMGVLRE 260
            LAPA+A+ MR++S  AR+Q+A A H LLG+ P AM +C     A   EEE   W+ CLLRLC DD + VRA+ALKAA+RAV   G   NA +AAWVL+ +    L   M RVL++  +S +        G A P P  L   +T       A+   +T  ++A +  RVKHA+  WAVHLSLAD   L  A++S+G     +  T  F  +SG+  D R  V+  AVE+W MFA + ++ + R +A KVA + +R L   VL+E
Sbjct:  143 LAPAVAQTMRMESTVARQQSAMAIHSLLGSVPGAMARC-DPGRADRPEEEDSFWVRCLLRLCFDDAVKVRADALKAAERAVSLGGLRGNAGIAAWVLEALRDGRLSQGMSRVLFYDASSQSQATVPGAAGEADPLPHALGSSST-------AAAPDRTNPRQA-TPQRVKHAIRVWAVHLSLADPTRLLRAKDSAGKKRLLDVGTGLFTWLSGKSADGRDDVKVQAVESWEMFAVSMMAQIGREEAKKVAHMFLRALSRWVLKE 397          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig12.1245.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5K7Y3_9PHAE3.920e-15435.56Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D8LJ95_ECTSI3.830e-6236.26Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LJ94_ECTSI1.640e-3941.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1561..1585
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 8..287

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig12contigS-dermatodea_contig12:34621..43758 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig12.1245.1mRNA_S-dermatodea_contig12.1245.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig12 34621..43782 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig12.1245.1 ID=prot_S-dermatodea_contig12.1245.1|Name=mRNA_S-dermatodea_contig12.1245.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=1594bp
METCAEMLAPALAKAMRLDSAQAREQAAAAAHGLLGNAPRAMKQCASLSE
AATEEEEGELWLPCLLRLCLDDCIGVRAEALKAAKRAVRCVGRNATVAAW
VLKRVNSRELFHDMDRVLYHHEASSTGPAPPRPPPLAERNTSQPSPAAAS
IIGKTKGKRAPSAARVKHAMMAWAVHLSLADFGGLTARESSGDVNAYERS
TNKFLAVSGRFKDPRPTVREAAVEAWGMFACTCLSDVSRRQAPKVADISV
RPLMMGVLRETDARVRQAVLSSLARCVASSQPHSIKHLWKLQEKLEKAGK
VGLAELIRRLAGGSHGADALHFSARMLAGLLPSFHTISGGHPSLRQAGLA
LTVEVSPLLSTLQTLMKAIPPPCPEMAIPVGTAASPPKPGAPVSSLDALP
TWSLIARAWCGLALWAVSERSACLKGIAGGSGARGDVPTSDGGEKGKGKV
GDNRKGEETPSGTETGENGKTKPLSSVLDWLLSGVAPAESGSEAVPVAPT
CTSSSSPAVDNAGAPSGTIGGLAEWKRVLLAGFVRALSSQSSFKPPREVL
EGGHLDICQVRAWLDAPVTTSFFDARLRGASREERAAGSSCPDCAMAEDV
RDTVFTGCCGAGISSEQSVLPCRRERDHEGATPRECPLWLALLLGVLGGR
CGRRSHEEQGGHLPPLVQCTCIGGSSRAGDIESTGNSRHPYLPETVLAEV
LDLSPGGAPAKLLSSLSRRLSTLPVERAGGKSDGEMRDELARRRSSILLA
LARVWRAEASRNISAWKPLSRSPAVADTAAAAAFGGFQAPLNERESSDVS
PALGIGAEQRPDDGLLERTADTLRLLLKAVTHFVVRSPPDTRDLPLGDSA
PERREAAGGADGTAQSAEARRLSDRRGHDVFGAIEEAFGGQAAALWRDLF
EARRGHRSGFPNLLKKLAKDCATLALCSAPVESVAESAASGKGEGLASHA
SSDIDGKLAAWGFAFSQSQPTQRDLEEEARRRGRGAVAWQGKSPRALGQD
GSNGQDLAPPPPLASLPILAAVTLSLFHVSRKEAGTTRSRAWGAGLATLA
WVLTSTTSTSTETAQPPGGVGVAPSTESKRTPAVDGVITNLVTVRSAVAS
GDRARTESDFEFPLDEDSLTPVSRFAAVGVSRSWAVQGPSPRKGQCVASH
PEAREEIRALVVGVLAVVRGLPRNVVASPGLLLALSPMLEAILDMPRSSE
ADAIQSALLDTWNHTFGNLPGGRLWESSFPPALLRCLARMAGRAEVKMPP
GMAFQTDSAEALPAFNREEVVDEGDGVEAEATRVPQGDALGVAQLSSAGF
EINVAGTLPAAGARRSFMRQAQGSPANNATPTSKKRPPSTIHKAPATGSK
FVRVVGSGRGSTGRRPTKRAAITTHTSLDGSQVLEPWENGSQLPDTEPDS
GAEDFFPEEELFPAQGRSGPPPPSDGSAAAAAAAPARPDGGVRSTGKRGN
EDMTSDPKTSSFIARDTSVINSPPRGDCTTSDRRVRPRNRHEAALDSEDT
PLELDEKGTENGSSTESQQREAAAMAAIAKESRTSTGEGNVGLDGGSDRD
SETANGEEVGIAGLVEEARRLARSLEAAKRSMSTEQLEEVDSLL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016024ARM-type_fold