mRNA_S-dermatodea_contig12.1243.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig12.1243.1
Unique NamemRNA_S-dermatodea_contig12.1243.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
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BLAST of mRNA_S-dermatodea_contig12.1243.1 vs. uniprot
Match: D8LJA0_ECTSI (Adenylate kinase isoenzyme 6 homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJA0_ECTSI)

HSP 1 Score: 322 bits (826), Expect = 4.360e-111
Identity = 155/173 (89.60%), Postives = 164/173 (94.80%), Query Frame = 1 
Query:    1 MGGPLGPNVLITGTPGTGKTCTSQQIAERTGLRHINVGDVVRLKQCHEGRDEAFDSFILDEDKLCDALEVQMEEGGNVVDFHSCDFFPEQWFDLILVLRVKTSTLFDRLQARGYSEKKVGENVECEIMQVVLEEAKEAYPEEAVHEVVSNRLEELESNVGRVVQWLDSWRSDN 519
            MGG LGPNVLITGTPGTGKTCTSQQIAERTGLRHINVGDVVRLKQCHEGRDE+FD+FILDEDKLCDA+E QMEEGGNV+DFHSCDFFPE WFDLILVLR +TSTLFDRL+ARGYSEKKVGENVECEIMQVVLEEAKE YPEEAVHEV SN +EELESNV RV QWLD+WRS+N
Sbjct:    1 MGGSLGPNVLITGTPGTGKTCTSQQIAERTGLRHINVGDVVRLKQCHEGRDESFDTFILDEDKLCDAMETQMEEGGNVIDFHSCDFFPEHWFDLILVLRAETSTLFDRLKARGYSEKKVGENVECEIMQVVLEEAKEGYPEEAVHEVPSNTIEELESNVSRVAQWLDAWRSNN 173
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BLAST of mRNA_S-dermatodea_contig12.1243.1 vs. uniprot
Match: A0A835YQ97_9STRA (Adenylate kinase isoenzyme 6 homolog n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQ97_9STRA)

HSP 1 Score: 260 bits (664), Expect = 2.050e-86
Identity = 121/174 (69.54%), Postives = 143/174 (82.18%), Query Frame = 1 
Query:    1 MGGPLGPNVLITGTPGTGKTCTSQQIAERTGLRHINVGDVVRLKQCHEGRDEAFDSFILDEDKLCDALEVQMEEGGNVVDFHSCDFFPEQWFDLILVLRVKTSTLFDRLQARGYSEKKVGENVECEIMQVVLEEAKEAYPEEAVHEVVSNRLEELESNVGRVVQWLDSWRSDNP 522
            MGGP GPN+L+TGTPGTGKTCT   IAE TGL H++VG VVR +QCHEGRD  FD+F+LDEDKLCDAL  +   GG V+DFHSCDFFPE WFDL+LVLR  T+TLFDRL+ARGY EKK+ EN++CEIMQVVLEEA EA+P   +HE+ SN +EE+E+NV RV QWL  WR+DNP
Sbjct:    1 MGGPKGPNILVTGTPGTGKTCTCAAIAEATGLTHVDVGAVVRAEQCHEGRDAEFDAFVLDEDKLCDALAPRAAAGGCVLDFHSCDFFPEDWFDLVLVLRADTATLFDRLKARGYHEKKLQENMQCEIMQVVLEEAHEAFPAPIIHELQSNTVEEMEANVDRVKQWLQQWRADNP 174
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BLAST of mRNA_S-dermatodea_contig12.1243.1 vs. uniprot
Match: A0A5D6XTZ2_9STRA (Adenylate kinase isoenzyme 6 homolog n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XTZ2_9STRA)

HSP 1 Score: 238 bits (607), Expect = 1.010e-77
Identity = 109/167 (65.27%), Postives = 137/167 (82.04%), Query Frame = 1 
Query:   19 PNVLITGTPGTGKTCTSQQIAERTGLRHINVGDVVRLKQCHEGRDEAFDSFILDEDKLCDALEVQMEEGGNVVDFHSCDFFPEQWFDLILVLRVKTSTLFDRLQARGYSEKKVGENVECEIMQVVLEEAKEAYPEEAVHEVVSNRLEELESNVGRVVQWLDSWRSDN 519
            PN+L+TGTPGTGKT   Q+IAERT L+H+NVGD+V+ ++ HEGRDE FD+ +LDEDK+CD +E  M EGG VVDFH+CDFFPE+WFDL+LVLRV  +TLFDRLQ RGYSEKKV ENVECEIM+VVL+EA+E+Y  E V E+ S  +E++E+NV RVV W+  W  D+
Sbjct:    5 PNILVTGTPGTGKTSMCQRIAERTPLQHVNVGDLVKERELHEGRDEEFDTLVLDEDKVCDEMEEMMSEGGRVVDFHTCDFFPERWFDLVLVLRVDNTTLFDRLQRRGYSEKKVSENVECEIMEVVLQEARESYAAEIVQELESRTIEDMENNVERVVAWIQQWTRDH 171
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BLAST of mRNA_S-dermatodea_contig12.1243.1 vs. uniprot
Match: A0A7S3HQR3_9STRA (Adenylate kinase isoenzyme 6 homolog n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HQR3_9STRA)

HSP 1 Score: 237 bits (604), Expect = 2.890e-77
Identity = 109/167 (65.27%), Postives = 140/167 (83.83%), Query Frame = 1 
Query:   19 PNVLITGTPGTGKTCTSQQIAERTGLRHINVGDVVRLKQCHEGRDEAFDSFILDEDKLCDALEVQMEEGGNVVDFHSCDFFPEQWFDLILVLRVKTSTLFDRLQARGYSEKKVGENVECEIMQVVLEEAKEAYPEEAVHEVVSNRLEELESNVGRVVQWLDSWRSDN 519
            PN+LITGTPGTGKT T++Q AERTGL+HINVGD+V+  +CHEG+DE FDS+I+D+DK+CD LE  +EEGG ++DFHSC+ FPE+WF+LILVLR  T+ LFDRL ARGYS+ K  EN+ECEIMQVVLEEA+E+Y    VHE+ S+ ++ELESNV R+V W +SW+ +N
Sbjct:    5 PNILITGTPGTGKTETAKQAAERTGLKHINVGDLVKQHECHEGKDEDFDSYIVDDDKICDLLEPIVEEGGCIIDFHSCELFPERWFELILVLRADTAVLFDRLTARGYSDLKRSENLECEIMQVVLEEARESYDAAIVHELQSSTVDELESNVERIVSWYESWKENN 171
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BLAST of mRNA_S-dermatodea_contig12.1243.1 vs. uniprot
Match: K3WIL6_GLOUD (Adenylate kinase isoenzyme 6 homolog n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WIL6_GLOUD)

HSP 1 Score: 231 bits (588), Expect = 8.410e-75
Identity = 106/167 (63.47%), Postives = 135/167 (80.84%), Query Frame = 1 
Query:   19 PNVLITGTPGTGKTCTSQQIAERTGLRHINVGDVVRLKQCHEGRDEAFDSFILDEDKLCDALEVQMEEGGNVVDFHSCDFFPEQWFDLILVLRVKTSTLFDRLQARGYSEKKVGENVECEIMQVVLEEAKEAYPEEAVHEVVSNRLEELESNVGRVVQWLDSWRSDN 519
            PN+L+TGTPGTGKT   Q IAERT L+H+NVGD+V+ ++ HEGRDE FD F+LDEDK+CD +E  + EGG +VDFH+CDFFPE+WFDL+LVLRV  +TLFDRLQ RGYSE+KV ENVECEIMQVVL+EA E+Y  E V E+ S  +E++++N+ RVV W+  W  D+
Sbjct:    6 PNILVTGTPGTGKTSMCQLIAERTPLQHVNVGDLVKERELHEGRDEEFDCFVLDEDKVCDEMEDLLAEGGKLVDFHTCDFFPERWFDLVLVLRVDNTTLFDRLQKRGYSERKVAENVECEIMQVVLQEAMESYAPEIVQELESRTVEDMDANIERVVAWIQQWVHDH 172
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BLAST of mRNA_S-dermatodea_contig12.1243.1 vs. uniprot
Match: A0A833SVK3_PHYIN (Adenylate kinase isoenzyme 6 homolog n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833SVK3_PHYIN)

HSP 1 Score: 227 bits (578), Expect = 2.610e-73
Identity = 106/171 (61.99%), Postives = 136/171 (79.53%), Query Frame = 1 
Query:   10 PLGPNVLITGTPGTGKTCTSQQIAERTGL-RHINVGDVVRLKQCHEGRDEAFDSFILDEDKLCDALEVQMEEGGNVVDFHSCDFFPEQWFDLILVLRVKTSTLFDRLQARGYSEKKVGENVECEIMQVVLEEAKEAYPEEAVHEVVSNRLEELESNVGRVVQWLDSWRSDN 519
            P GPN+L+TGTPGTGKT   QQ+AER+ L  H+NVGD+V+ +  H GRDE FD F+LDEDK+CD +E  M EGG VVDFH+CDFFPE+WFDL++VLRV  +TLFDRLQ RGYSEKKV ENVECEIM+V+L+EA+E+Y  E V E+ S  +E++ESN+ RV+ W+  W + +
Sbjct:    2 PRGPNILVTGTPGTGKTSMCQQLAERSQLLTHLNVGDLVKERGLHNGRDEEFDCFVLDEDKVCDEMEDMMTEGGKVVDFHTCDFFPERWFDLVVVLRVDNTTLFDRLQKRGYSEKKVAENVECEIMEVILQEARESYAPEIVQELSSCTVEDMESNIERVLTWVQHWMTQH 172
[Close]
BLAST of mRNA_S-dermatodea_contig12.1243.1 vs. uniprot
Match: A0A7S2SS55_9STRA (Adenylate kinase isoenzyme 6 homolog n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SS55_9STRA)

HSP 1 Score: 226 bits (576), Expect = 6.430e-73
Identity = 106/166 (63.86%), Postives = 132/166 (79.52%), Query Frame = 1 
Query:   19 PNVLITGTPGTGKTCTSQQIAERTGLRHINVGDVVRLKQCHEGRDEAFDSFILDEDKLCDALEVQMEEGGNVVDFHSCDFFPEQWFDLILVLRVKTSTLFDRLQARGYSEKKVGENVECEIMQVVLEEAKEAYPEEAVHEVVSNRLEELESNVGRVVQWLDSWRSD 516
            PNVL+TGTPGTGKT T+  IAE+T L+H+ V ++V+ ++CHEG DE   S I+DEDKL DA+E  ME+GG VVDFH CD FPE+WFDLILVLR   ++LFDRL  RGYS  KV ENVECEIMQV+LEEA+E++P E VHEV S  +E+++SNVGRV QWL+ W+ D
Sbjct:    7 PNVLVTGTPGTGKTATASLIAEKTELQHLEVSELVKREECHEGWDEDRKSHIIDEDKLLDAMEPLMEQGGQVVDFHGCDLFPERWFDLILVLRCNNTSLFDRLSERGYSATKVSENVECEIMQVILEEARESFPVEIVHEVQSESIEDMDSNVGRVAQWLEQWKVD 172
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BLAST of mRNA_S-dermatodea_contig12.1243.1 vs. uniprot
Match: A0A8K1C3H8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C3H8_PYTOL)

HSP 1 Score: 224 bits (571), Expect = 3.040e-72
Identity = 106/164 (64.63%), Postives = 132/164 (80.49%), Query Frame = 1 
Query:   19 PNVLITGTPGTGKTCTSQQIAERT-GLRHINVGDVVRLKQCHEGRDEAFDSFILDEDKLCDALEVQMEEGGNVVDFHSCDFFPEQWFDLILVLRVKTSTLFDRLQARGYSEKKVGENVECEIMQVVLEEAKEAYPEEAVHEVVSNRLEELESNVGRVVQWLDSW 507
            PN+L+TGTPGTGKT   Q +AER+  L+H+NVGD+V+ K  HEGRDE FD+FILDEDK+CD LE  M EGG +VDFH+CDFFPE+WFDL++VL+V  +TLFDRL  RGYS+KKV ENVECEIMQVVL+EA E+Y  E V  + S  +E++ESNV RV+QW+  W
Sbjct:    6 PNILVTGTPGTGKTTMCQMLAERSESLQHVNVGDLVKEKNLHEGRDEEFDAFILDEDKVCDELEDVMAEGGKIVDFHTCDFFPERWFDLVIVLQVDNTTLFDRLTKRGYSQKKVTENVECEIMQVVLQEAMESYAPEIVQALSSQTVEDMESNVERVLQWMQHW 169
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BLAST of mRNA_S-dermatodea_contig12.1243.1 vs. uniprot
Match: S2J2C6_MUCC1 (Adenylate kinase isoenzyme 6 homolog n=5 Tax=Mucor TaxID=4830 RepID=S2J2C6_MUCC1)

HSP 1 Score: 224 bits (570), Expect = 4.170e-72
Identity = 103/167 (61.68%), Postives = 135/167 (80.84%), Query Frame = 1 
Query:   19 PNVLITGTPGTGKTCTSQQIAERTGLRHINVGDVVRLKQCHEGRDEAFDSFILDEDKLCDALEVQMEEGGNVVDFHSCDFFPEQWFDLILVLRVKTSTLFDRLQARGYSEKKVGENVECEIMQVVLEEAKEAYPEEAVHEVVSNRLEELESNVGRVVQWLDSWRSDN 519
            PN+L+TGTPGTGKT TS+ IAE TGL H+NVGD+V+ KQ HEG  E FD+ +LDEDKL D LE  +++GG VVDFH+C+ FPE+WFDL+LVLR  TS+L+DR+  RGY+++K+ EN+ECEIMQVVLE A E+Y  E V E+ SN ++++ESNV RV QWLD+W+ +N
Sbjct:    6 PNILVTGTPGTGKTTTSEMIAEATGLEHVNVGDIVKSKQLHEGYLEEFDTHVLDEDKLLDELEEMLKDGGKVVDFHTCEIFPERWFDLVLVLRADTSSLYDRMVKRGYNKRKIDENMECEIMQVVLETAHESYAPEIVVELPSNTVDDMESNVDRVKQWLDAWKINN 172
[Close]
BLAST of mRNA_S-dermatodea_contig12.1243.1 vs. uniprot
Match: L8H5N4_ACACA (Adenylate kinase isoenzyme 6 homolog n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H5N4_ACACA)

HSP 1 Score: 223 bits (568), Expect = 9.280e-72
Identity = 104/165 (63.03%), Postives = 131/165 (79.39%), Query Frame = 1 
Query:   22 NVLITGTPGTGKTCTSQQIAERTGLRHINVGDVVRLKQCHEGRDEAFDSFILDEDKLCDALEVQMEEGGNVVDFHSCDFFPEQWFDLILVLRVKTSTLFDRLQARGYSEKKVGENVECEIMQVVLEEAKEAYPEEAVHEVVSNRLEELESNVGRVVQWLDSWRSD 516
            N+LITGTPGTGKT  S+ +A  TGLRHINV D+V+ K  HEG+DE FDS+ILDEDK+CD LE  M  GGNVVDFH+CDFFPE+WFDL++VLR   S L+ RL +R Y + K+ EN+ECEIMQVVL+EA+E+Y +E V E+ +N +EE+ESN  R+ QWL SWRS+
Sbjct:    9 NILITGTPGTGKTTLSELVASSTGLRHINVTDLVKEKSLHEGKDEEFDSYILDEDKVCDELEDTMTSGGNVVDFHTCDFFPERWFDLVVVLRADNSILYPRLVSRSYKDNKIQENMECEIMQVVLDEARESYKQEIVVELTNNTVEEMESNASRIQQWLASWRSN 173
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig12.1243.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJA0_ECTSI4.360e-11189.60Adenylate kinase isoenzyme 6 homolog n=2 Tax=Ectoc... [more]
A0A835YQ97_9STRA2.050e-8669.54Adenylate kinase isoenzyme 6 homolog n=1 Tax=Tribo... [more]
A0A5D6XTZ2_9STRA1.010e-7765.27Adenylate kinase isoenzyme 6 homolog n=1 Tax=Pythi... [more]
A0A7S3HQR3_9STRA2.890e-7765.27Adenylate kinase isoenzyme 6 homolog n=1 Tax=Spume... [more]
K3WIL6_GLOUD8.410e-7563.47Adenylate kinase isoenzyme 6 homolog n=1 Tax=Globi... [more]
A0A833SVK3_PHYIN2.610e-7361.99Adenylate kinase isoenzyme 6 homolog n=1 Tax=Phyto... [more]
A0A7S2SS55_9STRA6.430e-7363.86Adenylate kinase isoenzyme 6 homolog n=1 Tax=Rhizo... [more]
A0A8K1C3H8_PYTOL3.040e-7264.63Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
S2J2C6_MUCC14.170e-7261.68Adenylate kinase isoenzyme 6 homolog n=5 Tax=Mucor... [more]
L8H5N4_ACACA9.280e-7263.03Adenylate kinase isoenzyme 6 homolog n=1 Tax=Acant... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig12contigS-dermatodea_contig12:2373..6743 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score325.5
Seed ortholog evalue1.6e-86
Seed eggNOG ortholog2880.D8LJA0
Preferred nameFAP7
KEGG rclassRC00002
KEGG koko:K18532
KEGG ReactionR00127,R01547
KEGG Pathwayko00230,ko01100,ko01110,ko01130,ko03008,map00230,map01100,map01110,map01130,map03008
KEGG ModuleM00049
GOsGO:0000166,GO:0000462,GO:0003674,GO:0003824,GO:0004017,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006979,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0010467,GO:0010468,GO:0010494,GO:0015030,GO:0015949,GO:0016070,GO:0016072,GO:0016301,GO:0016310,GO:0016462,GO:0016604,GO:0016740,GO:0016772,GO:0016776,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0018130,GO:0019205,GO:0019222,GO:0019438,GO:0019637,GO:0022613,GO:0030490,GO:0030554,GO:0031974,GO:0031981,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033554,GO:0034470,GO:0034599,GO:0034641,GO:0034654,GO:0034660,GO:0035639,GO:0035770,GO:0036094,GO:0036166,GO:0036464,GO:0042221,GO:0042254,GO:0042274,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0046483,GO:0046940,GO:0050145,GO:0050789,GO:0050896,GO:0051716,GO:0055086,GO:0060255,GO:0065007,GO:0070013,GO:0070887,GO:0071704,GO:0071840,GO:0090304,GO:0090407,GO:0097159,GO:0097367,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1990904
EggNOG free text desc.adenylate kinase activity
EggNOG OGsCOG1936@1,KOG3347@2759
EC2.7.4.3
COG Functional cat.F
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03009
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionP-loop containing nucleoside triphosphate hydrolase
Ec32 orthologEc-02_005300.1
Exons6
Model size531
Cds size531
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig12.1243.1prot_S-dermatodea_contig12.1243.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig12 2373..6743 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924226.130983-CDS-S-dermatodea_contig12:2372..24531622924226.130983-CDS-S-dermatodea_contig12:2372..2453Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12 2373..2453 +
1694079107.5758967-CDS-S-dermatodea_contig12:2372..24531694079107.5758967-CDS-S-dermatodea_contig12:2372..2453Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12 2373..2453 +
1622924226.14295-CDS-S-dermatodea_contig12:2927..29661622924226.14295-CDS-S-dermatodea_contig12:2927..2966Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12 2928..2966 +
1694079107.587231-CDS-S-dermatodea_contig12:2927..29661694079107.587231-CDS-S-dermatodea_contig12:2927..2966Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12 2928..2966 +
1622924226.1535943-CDS-S-dermatodea_contig12:3370..34391622924226.1535943-CDS-S-dermatodea_contig12:3370..3439Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12 3371..3439 +
1694079107.5997672-CDS-S-dermatodea_contig12:3370..34391694079107.5997672-CDS-S-dermatodea_contig12:3370..3439Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12 3371..3439 +
1622924226.1660807-CDS-S-dermatodea_contig12:5683..57661622924226.1660807-CDS-S-dermatodea_contig12:5683..5766Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12 5684..5766 +
1694079107.609684-CDS-S-dermatodea_contig12:5683..57661694079107.609684-CDS-S-dermatodea_contig12:5683..5766Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12 5684..5766 +
1622924226.188026-CDS-S-dermatodea_contig12:5954..60171622924226.188026-CDS-S-dermatodea_contig12:5954..6017Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12 5955..6017 +
1694079107.625574-CDS-S-dermatodea_contig12:5954..60171694079107.625574-CDS-S-dermatodea_contig12:5954..6017Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12 5955..6017 +
1622924226.1992865-CDS-S-dermatodea_contig12:6547..67431622924226.1992865-CDS-S-dermatodea_contig12:6547..6743Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12 6548..6743 +
1694079107.6360078-CDS-S-dermatodea_contig12:6547..67431694079107.6360078-CDS-S-dermatodea_contig12:6547..6743Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12 6548..6743 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig12.1243.1

>prot_S-dermatodea_contig12.1243.1 ID=prot_S-dermatodea_contig12.1243.1|Name=mRNA_S-dermatodea_contig12.1243.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=177bp
MGGPLGPNVLITGTPGTGKTCTSQQIAERTGLRHINVGDVVRLKQCHEGR
DEAFDSFILDEDKLCDALEVQMEEGGNVVDFHSCDFFPEQWFDLILVLRV
KTSTLFDRLQARGYSEKKVGENVECEIMQVVLEEAKEAYPEEAVHEVVSN
RLEELESNVGRVVQWLDSWRSDNPNP*
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mRNA from alignment at S-dermatodea_contig12:2373..6743+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig12.1243.1 ID=mRNA_S-dermatodea_contig12.1243.1|Name=mRNA_S-dermatodea_contig12.1243.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=4371bp|location=Sequence derived from alignment at S-dermatodea_contig12:2373..6743+ (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGGGTGGGCCGCTGGGGCCGAATGTGCTAATAACGGGGACACCTGGCAC
TGGGAAAACGTGCACCTCCCAACAGATCGCCGTGAGTCCCAACAGCTCGA
ACTTGCTTGGTATGTACTTGTACGTGTAGTGCCATTTGTGGAGTCGAGCC
AGCCTTCCGGCCGTGCGGCCCCTAGGCCTACCCTCTAAGTTTCCCCCTTG
GCAGAGTCATTAGAGAAACGGTGGAATGCGCGGGGGGGTTATGTTAACTG
CGAGGGCTAGGAAGTGAGCTTGCAGCACCTCCCCGAGGCCCTGTGTTGTT
GGGAAGAGGAAAGGGGAACTTGAATATTGTATTACAGCAGTATACTTGTA
TTGAAATTAGCTGGCGGTTTGTTTGTCTGTTTCCGTCTCCCATCTTATTT
ACCCGATGTTCAGCGTGGTGGGTCTTTGTGCTTGGCTAACGTTAGCGCCA
GGCCGTAGACCAATGCGTGGCGACTTGGCCCCTCCAGCAAAGGCACCCAG
GGCTCGGCGTCTAATGCTGTTCGGTCGGCCTCCTGTCTTGTCGGCGCACG
CACAGGAACGTACGGGATTGAGGCACATCAACGTCGGGGACGTGGTAAGA
TGGGGCTAACCTGAAACGTTATGTCTGCCGTGTACCCCTGGCACTGCTTT
AGCCATTATGTACTCGAGTATCATAGGGTCGTTGTTTTCAGAGGTGGTTG
CGGGTTTCTGTACATAGCCAAGCCGGATTGATCCACGAAACGGCTCCTTG
CTATGACAAGCACTGCTGTAGTCTCCACACACGGTTGAGCGCAGTGCAAT
GCTATGTTGTTGCAAACCTCAACCCTGCTTACGTGTTTGATGACATCATC
CCGTCGTTGGTATGAAACGTAAGCACCCTTCAACTGTGTCCAGTGTTACT
AATTTTATAGAGCCTAGTTTATTTACTACTATAGTATTGCGGGGATATGT
CGCAGCTGGTGTCTCTACGACGACCCTCGCCGCTCCTGCAACACGCAGGT
TCGACTGAAGCAGTGCCACGAGGGCCGGGACGAGGCGTTCGATTCGTTCA
TCCTAGATGAGGACAAGGTGCGCGTCGCCTCTAGCATGATGTGTACTTGG
AGCGGTTGTATGTACCTCGTCGGCAATGATGAGATAGCTTTCAGACTTTG
AAACGGGGGGGAAACCAACGTCCTTTTCGTGTGTGGAAGTTTCTGCGTGG
AAGGTTTTACACGTTCAACGACTCGGTAGGCGTACGCCGCATGTGACTCG
CGTAAATGGAACTCGCCGGGGGCGCTGATGGGCATGCCGAACAAACGAGT
CGTAACTTCGATTCGATTCGTAATTCGTAATTCATCGAAACTTGGAAGAC
GCGAGCCAAGTCCACACTCGCCATCGCGACAAAACGGCGTAAGCTGTCGT
TTGGATTAATTGGAAAAATAGTATATATAATATAACCATTGGAATGCAAC
TACTGTGATTTTTAGGGCCTTTTTTCAAAACTAGCCTATTCATATGCATT
TTTTTACAGCGTTATAGAGAGTTGAATAGGCGTTATGCCGAAAAACACCC
GGTCATATACCACTCTGGGCATCGAGGACTTCGGCCTGCACAACTCTAGA
CACGGGACACAGCTAGTGGAGCGCGGCGGGAAGGTGGCGTGGCATCACAC
ACAGGAGGGAAAGAGCTACTGCTTCGACGAATTGGTCCACTTTGAGTGAA
GAAAATTATGATCAAATCGAAGCCCCAACACGCATAGCACAAGCATAGCG
CCAACACCCTGCCACTGCACGCGCAACTTTGAGAAGTTCGCAACATCACT
CACCAGAGGTCTTGGGCTACCCCATGGGCTCGCCTCAAGAGAAGGAATCA
CTGCATTCCCGGCAAAGCTCCGCAAGCGCGGTCGAGTCGCTCAAAATATA
GTTGCTCTGTCTAAATTCCGATTGTCTGCTGCATGTATCTGCATACTATT
TTGTGTACGTTTATGTCCTTGGGAAATTCACCCAATACTATATAAATAAT
TATTCATTCTAAAACCAATATCGTGTACACAAAAAAAACAAGTTGGGGTG
AATTTTCCAAGGACATAAACGTACACAAAATAGTATGTAGATACATGCAA
CAGACAATCGGAATTTCGACAGAGCAACTAAAGTTTGAGCGACTCGACCG
CGCTTGCGGAGCTTTGCCGGGAATGCAGTGATTCCTTCTCTCGAGGCGAG
CCCATGGGGTAGCCCAAGGCCTCTGGTGAGTGGTGTTACGAAGTTCTCAA
TGTTGCGCGTGCACGAAGCCGTACAGTGGCAGGGTGTTGGCGCTATGCTT
GTGCTATGCGTGTTGGGGCTTCGATTTGATCATAATTTTCTTCACTCACT
GTGGACCAATTCGTCCAAGCAGTAGCTCTTTCCTTCCTGTGTGTGATGCC
ACGCCACCTTCCCGCCGCGCTCCGCTAGCTGTGTCCCGTGTATGGAGTTG
TGCAGGCCGAAGTCCTCGATCCCAGGGTGGTGTAAGACCGGGTGTTTTTC
GGCATAACGCCTATCCAACTCTCTATAAGGCTATTAGAAAATTGCATAGG
CTAATTTTGAATAAAATACAAGAATGTATAGAGACCGCCCACAGGTGCAC
TCCAATGGTTTTATTATTTATAGTATTTTTCCAAAGTTTGGATTCGTGCA
AGATTCCTTCTCCAACATCACCATTCGTGCTCGGGCTATTTATTATCATT
AGGTTACAGTTAGGGGCTCTATAGTATAATAGTGGTGATCGAAGTGATAG
GTTCGGACGAAAAAGTTCATCCGCTCGGACTATTTTGGATTTACAACGAA
AACATTTCTTTTTTAGTTTGCAGCTGGAAATTTGTGGCACGTGGGATTAG
GAGGCACCCAGTCGCTCGGTAATTTATCTCGGCAGCGAGTGTTATCACGT
ATGGAGCTCGGTAGAGCAGCTCCCTGCTCGCCGCGAACCCCCTCCTGCCG
TGCTACTGCCTTCAGAGCTCGGCGTTGTTTCGTCGGGGCTGTCCTGTACA
ATATGTAACGTACCAGGTACCACACATCGTGATTTTGTGCTTTGATTTAT
TTTTCGGTGAACGACACGATCGAGTACACCTTTGTCGATTTCCCGCCATA
TCCGGGTATTTGCGACTTCTCCACGTACACATTCATGAGTCTGTACCAAG
ATTCGTGCGTTCCTCGATACAGTATTCACTATTCATTGTTTATGGAATGG
GCCTGAATATGATAGCAAGGTGTACTCGACAGGGACGAAGGGGATGCTGG
TTTACATGACGCGCGCATTGCTTCTCCTGCCTGTTTGCCTCCTTGGACCT
TCTGCGCGAAGCTATGTGATGCGCTGGAAGTGCAAATGGAGGAAGGCGGG
AACGTCGTGGACTTCCACTCGTGCGATTTCTTCCCTGAGCAGTGGTGGGC
ATGAAGCGGATTTACGGATTTGTGTGATTGTCTGGGAATCGCGGGCATGA
CGTATCTACGTTTGTGGAGGGGGATCGCATTGACGATGTGAGGCGGTGTG
GCCTTGGAATGCTCTGCTGACCGTACAATCCGGAAACGTTCGTCGTGGAA
CGTTCTACGAAACGCTGCTGTGTGCCGGGCAGGTTCGACTTGATCCTGGT
GCTCAGGGTGAAGACCAGCACCCTCTTCGACAGGTTACAGGCCAGGTGTG
TGAGGCTGTAGGCCTGGTGTTGTTCCCTGGGCGTGTTAGCACTAGAGCCC
AACACACTCTTCAGGTCGGCTTGGCCTCTGTAGTTCCTTCCATTTTTCGA
AGTAATGCGTCGCAGCGACGAGACGTTGTTTGTTGTTTCCAAATCCGCGG
GCGAGTCTGGACTTTGTCGGGAGTGGCCTGCTACACTGTCTTGTAGCCAT
GCATACGTTCTGCCGGTGACATTGAGACGCGGACTTGCCGTGCTTGGGCG
CGTGCCTTAAAACCTGACCCCCCGAATGGGGTACCTTCGATACTGGACTT
GTTACCAATCGAGGCTGCGCACATCGAGGCTGGCTTGGTATTTGGCGAAT
TTCACTGTCACCACCTCGCTTTCGTTGCCCAGCCTCAACGACAGCGCCGA
CCGTGTACGTGTTTCGATGACAAAGATGTGCTTGCTGATCGCGCCCGTAC
CCTGGTGTGACTACGATTTATCACGTTTTGGTCTTGATTTTGCTGCTTGC
TTCGCTTTTGCTGTCGACTTTCCAGGGGGTACAGCGAGAAAAAGGTGGGG
GAGAACGTGGAGTGCGAGATCATGCAGGTGGTGCTGGAAGAGGCCAAGGA
GGCCTATCCCGAAGAAGCTGTTCACGAAGTCGTGAGCAATAGGCTGGAGG
AGCTTGAGTCCAACGTCGGCAGGGTAGTGCAGTGGCTGGACTCTTGGCGA
AGCGACAACCCCAATCCATGA
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Coding sequence (CDS) from alignment at S-dermatodea_contig12:2373..6743+

>mRNA_S-dermatodea_contig12.1243.1 ID=mRNA_S-dermatodea_contig12.1243.1|Name=mRNA_S-dermatodea_contig12.1243.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1062bp|location=Sequence derived from alignment at S-dermatodea_contig12:2373..6743+ (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGGGTGGGCCGCTGGGGCCGAATGTGCTAATAACGGGGACACCTGGCAC
TGGGAAAACGTGCACCTCCCAACAGATCGCCATGGGTGGGCCGCTGGGGC
CGAATGTGCTAATAACGGGGACACCTGGCACTGGGAAAACGTGCACCTCC
CAACAGATCGCCGAACGTACGGGATTGAGGCACATCAACGTCGGGGACGT
GGAACGTACGGGATTGAGGCACATCAACGTCGGGGACGTGGTTCGACTGA
AGCAGTGCCACGAGGGCCGGGACGAGGCGTTCGATTCGTTCATCCTAGAT
GAGGACAAGGTTCGACTGAAGCAGTGCCACGAGGGCCGGGACGAGGCGTT
CGATTCGTTCATCCTAGATGAGGACAAGCTATGTGATGCGCTGGAAGTGC
AAATGGAGGAAGGCGGGAACGTCGTGGACTTCCACTCGTGCGATTTCTTC
CCTGAGCAGTGCTATGTGATGCGCTGGAAGTGCAAATGGAGGAAGGCGGG
AACGTCGTGGACTTCCACTCGTGCGATTTCTTCCCTGAGCAGTGGTTCGA
CTTGATCCTGGTGCTCAGGGTGAAGACCAGCACCCTCTTCGACAGGTTAC
AGGCCAGGTTCGACTTGATCCTGGTGCTCAGGGTGAAGACCAGCACCCTC
TTCGACAGGTTACAGGCCAGGGGGTACAGCGAGAAAAAGGTGGGGGAGAA
CGTGGAGTGCGAGATCATGCAGGTGGTGCTGGAAGAGGCCAAGGAGGCCT
ATCCCGAAGAAGCTGTTCACGAAGTCGTGAGCAATAGGCTGGAGGAGCTT
GAGTCCAACGTCGGCAGGGTAGTGCAGTGGCTGGACTCTTGGCGAAGCGA
CAACCCCAATCCATGAGGGGTACAGCGAGAAAAAGGTGGGGGAGAACGTG
GAGTGCGAGATCATGCAGGTGGTGCTGGAAGAGGCCAAGGAGGCCTATCC
CGAAGAAGCTGTTCACGAAGTCGTGAGCAATAGGCTGGAGGAGCTTGAGT
CCAACGTCGGCAGGGTAGTGCAGTGGCTGGACTCTTGGCGAAGCGACAAC
CCCAATCCATGA
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