mRNA_S-dermatodea_contig11986.1237.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig11986.1237.1
Unique NamemRNA_S-dermatodea_contig11986.1237.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
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BLAST of mRNA_S-dermatodea_contig11986.1237.1 vs. uniprot
Match: D7FYK3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYK3_ECTSI)

HSP 1 Score: 305 bits (782), Expect = 6.010e-102
Identity = 153/171 (89.47%), Postives = 162/171 (94.74%), Query Frame = 1 
Query:   40 VALSPAVPKNNLPQLDKINILKQTSEALREPVRTQMQTEEISISHDAYQILKFHGSYMQDDRSLRKKGQEKAYSFMLRLKMPAGVCSPELYTLLDDLSREYGHGHLRLTTRQTYQLHGVAKHNLKTVIKSIMQVGSSTVGGCGDVNRNIMCTPAPIMDRPEYVYARQYTKV 552
            VA  P  P+    +LDKIN+LKQ SEALREPVR+QMQTEEISISHDAYQILKFHGSYMQDDRSLRKKG+EKAYSFMLRLKMPAGVCSPELYTLLDDLSREYGHGHLRLTTRQT+QLHGVAKHNLKTVIKSIMQVGSSTVGGCGDVNRNIMCTPAPI++RPEYVYARQYTK+
Sbjct:    2 VAQPPVKPQ----KLDKINLLKQNSEALREPVRSQMQTEEISISHDAYQILKFHGSYMQDDRSLRKKGKEKAYSFMLRLKMPAGVCSPELYTLLDDLSREYGHGHLRLTTRQTFQLHGVAKHNLKTVIKSIMQVGSSTVGGCGDVNRNIMCTPAPIVNRPEYVYARQYTKI 168
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BLAST of mRNA_S-dermatodea_contig11986.1237.1 vs. uniprot
Match: A0A6H5KR41_9PHAE (NIR_SIR_ferr domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR41_9PHAE)

HSP 1 Score: 298 bits (763), Expect = 5.240e-99
Identity = 152/176 (86.36%), Postives = 162/176 (92.05%), Query Frame = 1 
Query:   40 VALSPAVPKNNLPQLDKINILKQTSEALREPVRTQMQTEEISISHDAYQILKFHGSYMQDDRSLRKKGQEK-----AYSFMLRLKMPAGVCSPELYTLLDDLSREYGHGHLRLTTRQTYQLHGVAKHNLKTVIKSIMQVGSSTVGGCGDVNRNIMCTPAPIMDRPEYVYARQYTKV 552
            VA  P  P+    +LDKIN+LKQ SEALREP+R+QMQTEEISISHDAYQILKFHGSYMQDDRSLRKKG+EK     AYSFMLRLKMPAGVCSPELYTLLDDLSREYGHGHLRLTTRQT+QLHGVAKHNLKTVIKSIMQVGSSTVGGCGDVNRNIMCTPAPI++RPEYVYARQYTK+
Sbjct:   68 VAQPPVKPQ----KLDKINLLKQNSEALREPLRSQMQTEEISISHDAYQILKFHGSYMQDDRSLRKKGKEKVGGVDAYSFMLRLKMPAGVCSPELYTLLDDLSREYGHGHLRLTTRQTFQLHGVAKHNLKTVIKSIMQVGSSTVGGCGDVNRNIMCTPAPIVNRPEYVYARQYTKI 239
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BLAST of mRNA_S-dermatodea_contig11986.1237.1 vs. uniprot
Match: A0A835ZIU7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIU7_9STRA)

HSP 1 Score: 244 bits (624), Expect = 7.350e-75
Identity = 125/171 (73.10%), Postives = 138/171 (80.70%), Query Frame = 1 
Query:   40 VALSPAVPKNNLPQLDKINILKQTSEALREPVRTQMQTEEISISHDAYQILKFHGSYMQDDRSLRKKGQEKAYSFMLRLKMPAGVCSPELYTLLDDLSREYGHGHLRLTTRQTYQLHGVAKHNLKTVIKSIMQVGSSTVGGCGDVNRNIMCTPAPIMDRPEYVYARQYTKV 552
            VA  PA P     +LDKINILK  S+ LREPV++QM TEE+ ISHDAYQILKFHGSYMQDDR  RKKG EK YSFMLRLKMP G C P LY LLDDLSR+YG G++RLTTRQT+QLHGVAK NLK VI+SIM VGSSTVGGCGDVNRN+M TPAP  DRP Y + R YTK+
Sbjct:    2 VAEPPAKPV----KLDKINILKLNSQNLREPVKSQMATEEVFISHDAYQILKFHGSYMQDDRDKRKKGAEKEYSFMLRLKMPGGECPPALYRLLDDLSRDYGCGNMRLTTRQTFQLHGVAKSNLKHVIRSIMDVGSSTVGGCGDVNRNVMATPAPFTDRPAYAHVRHYTKL 168
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BLAST of mRNA_S-dermatodea_contig11986.1237.1 vs. uniprot
Match: A0A835Z7S6_9STRA (Assimilatory sulfite reductase (ferredoxin) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7S6_9STRA)

HSP 1 Score: 245 bits (625), Expect = 1.090e-74
Identity = 120/157 (76.43%), Postives = 134/157 (85.35%), Query Frame = 1 
Query:   79 QLDKINILKQTSEALREPVRTQMQTEEISISHDAYQILKFHGSYMQDDRSLRKKGQEKAYSFMLRLKMPAGVCSPELYTLLDDLSREYGHGHLRLTTRQTYQLHGVAKHNLKTVIKSIMQVGSSTVGGCGDVNRNIMCTPAPIMDRPEYVYARQYTK 549
            +LDK+N++K  S+ LREPVR++M TEE+ I+HDAYQILKFHGSYMQD+R  RKKG +K YSFMLRLKMP G C PELY LLDDLS EYGHGHLRLTTRQT+QLHGVAK NLK VI+ IM VGSSTVGGCGDVNRNIM TPAPI +RPEY YAR  TK
Sbjct:   52 KLDKVNLIKLHSQNLREPVRSEMATEEVFINHDAYQILKFHGSYMQDNRENRKKGADKDYSFMLRLKMPGGECPPELYRLLDDLSNEYGHGHLRLTTRQTFQLHGVAKSNLKHVIREIMNVGSSTVGGCGDVNRNIMTTPAPITNRPEYEYARTVTK 208
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BLAST of mRNA_S-dermatodea_contig11986.1237.1 vs. uniprot
Match: A0A7S2SIJ1_9STRA (Assimilatory sulfite reductase (ferredoxin) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SIJ1_9STRA)

HSP 1 Score: 193 bits (491), Expect = 5.260e-55
Identity = 98/158 (62.03%), Postives = 121/158 (76.58%), Query Frame = 1 
Query:   79 QLDKINILKQTSEALREPVRTQMQTEEISISHDAYQILKFHGSYMQDDRSLRKKGQEKAYSFMLRLKMPAGVCSPELYTLLDDLSREYGHGHLRLTTRQTYQLHGVAKHNLKTVIKSIMQVGSSTVGGCGDVNRNIMCTPAPIMDRPEYVYARQYTKV 552
            +L KI  +K  S+ALREP+RT+M  +EI +SHD+YQILK+HGSY QD+R LRK  Q+KAYSFMLRLK+P G     LY LLDDL   YG  +LR TTRQ YQ+HGV K +LK VI  IM++GSSTVG CGDV+RN+M TPAP + +P YVYAR+ +KV
Sbjct:   71 KLAKIEQVKVNSQALREPLRTEMANDEIFVSHDSYQILKYHGSYQQDNRELRKPKQQKAYSFMLRLKVPCGEVPANLYRLLDDLCDTYGEHNLRATTRQAYQMHGVMKGDLKVVISEIMKIGSSTVGACGDVSRNVMTTPAPKVGKP-YVYAREASKV 227
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BLAST of mRNA_S-dermatodea_contig11986.1237.1 vs. uniprot
Match: A0A1Z5JYL9_FISSO (Assimilatory sulfite reductase (ferredoxin) n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JYL9_FISSO)

HSP 1 Score: 191 bits (485), Expect = 2.580e-54
Identity = 99/170 (58.24%), Postives = 122/170 (71.76%), Query Frame = 1 
Query:   43 ALSPAVPKNNLPQLDKINILKQTSEALREPVRTQMQTEEISISHDAYQILKFHGSYMQDDRSLRKKGQEKAYSFMLRLKMPAGVCSPELYTLLDDLSREYGHGHLRLTTRQTYQLHGVAKHNLKTVIKSIMQVGSSTVGGCGDVNRNIMCTPAPIMDRPEYVYARQYTKV 552
            +LS  + K    +L KI  LK  S+ L +P+ T++ TEE  IS DAYQILK+HGSY Q DR  + KG++  Y FMLRLK PAG   PELY  +DDLSR+YG G LR TTRQ +Q+HG+ K  LKTVI +IM +GSSTVG CGDV+RN+MCTPAP    PEY YAR+Y+KV
Sbjct:   35 SLSMVLEKPKEKKLAKIESLKVDSDHLLKPLLTELATEEAGISKDAYQILKYHGSYQQSDREYKGKGKD--YQFMLRLKQPAGELPPELYRTIDDLSRDYGQGDLRATTRQCFQIHGILKGGLKTVISTIMNIGSSTVGACGDVSRNVMCTPAPFQS-PEYKYAREYSKV 201
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BLAST of mRNA_S-dermatodea_contig11986.1237.1 vs. uniprot
Match: A0A7S3JYK4_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JYK4_9STRA)

HSP 1 Score: 189 bits (481), Expect = 1.840e-53
Identity = 95/162 (58.64%), Postives = 118/162 (72.84%), Query Frame = 1 
Query:   79 QLDKINILKQTSEALREP-VRTQMQTEEISISHDAYQILKFHGSYMQDDRSLRKKGQEKAYSFMLRLKMPAGVCSPELYTLLDDLSREYGHGHLRLTTRQTYQLHGVAKHNLKTVIKSIMQVGSSTVGGCGDVNRNIMCTPAPIMD--RPEYVYARQYTKVC 555
            +LDKIN +KQ S  LR P V      E ISISHD+Y +LKFHGSY QDDR  RKKGQEKA+ FMLRLK+P+G C   +Y +LDDL   YG   LR+TTRQ +Q+HG+ K +LK VI++IM+ GS+T+GGCGD+NRN+M  PAPI D  RP+Y  AR +  VC
Sbjct:   45 KLDKINEMKQASVNLRHPLVEDLADLETISISHDSYNLLKFHGSYQQDDREKRKKGQEKAFQFMLRLKVPSGECPGAVYNVLDDLCENYGQKDLRITTRQAWQIHGILKKDLKHVIRTIMEAGSTTIGGCGDINRNVMLPPAPIDDDNRPQYRVARHWAAVC 206
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BLAST of mRNA_S-dermatodea_contig11986.1237.1 vs. uniprot
Match: B8BZI8_THAPS (Assimilatory sulfite reductase (ferredoxin) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BZI8_THAPS)

HSP 1 Score: 185 bits (470), Expect = 8.570e-52
Identity = 98/164 (59.76%), Postives = 120/164 (73.17%), Query Frame = 1 
Query:   61 PKNNLPQLDKINILKQTSEALREPVRTQMQTEEISISHDAYQILKFHGSYMQDDRSLRKKGQEKAYSFMLRLKMPAGVCSPELYTLLDDLSREYGHGHLRLTTRQTYQLHGVAKHNLKTVIKSIMQVGSSTVGGCGDVNRNIMCTPAPIMDRPEYVYARQYTKV 552
            PK +LP+++K+ I    S  LREP+  Q+ TEEI IS DAYQILK+HGSY Q++R  R     K Y FMLRLK PAG   P+LY LLDDLS ++G G LR TTRQ +Q+HG+ K +LKTVI SIM +GSSTVG CGDV+RN+M TPAP  D P Y YAR+Y+KV
Sbjct:   98 PKKDLPKIEKLKI---ASNYLREPLGEQLATEEIGISKDAYQILKYHGSYQQNNRETRGP---KDYQFMLRLKQPAGELPPDLYRLLDDLSSKHGQGDLRATTRQCFQIHGILKGDLKTVISSIMNMGSSTVGACGDVSRNVMTTPAPF-DTPAYNYAREYSKV 254
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BLAST of mRNA_S-dermatodea_contig11986.1237.1 vs. uniprot
Match: A0A7S4RLB8_9STRA (Assimilatory sulfite reductase (ferredoxin) n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RLB8_9STRA)

HSP 1 Score: 184 bits (468), Expect = 9.060e-52
Identity = 95/159 (59.75%), Postives = 118/159 (74.21%), Query Frame = 1 
Query:   79 QLDKINILKQTSEALREPVRTQMQTEEISISHDAYQILKFHGSYMQDDRSLRKKGQEKAYSFMLRLKMPAGVCSPELYTLLDDLSREYGHGHLRLTTRQTYQLHGVAKHNLKTVIKSIMQVGSSTVGGCGDVNRNIMCTPAPIMDRPEYVYARQYTKVC 555
            +L KI  LK  SE L +P++ Q++TE+I +S DAYQILK+HGSY Q +R +R  G+ K Y FMLRLK PAG   PELY L+DDLS ++G G LR TTRQ +Q+HG+ K NLKTVI SIM +GSSTVG CGDVNRN+M TPAP    PEY  AR+++K C
Sbjct:   52 KLAKIEQLKVESEHLIQPLKDQLKTEDIGVSKDAYQILKYHGSYQQTNREVR--GKVKDYQFMLRLKQPAGELPPELYRLIDDLSAKHGQGDLRATTRQCFQIHGILKGNLKTVISSIMNIGSSTVGACGDVNRNVMTTPAPFAT-PEYQEARKWSKAC 207
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BLAST of mRNA_S-dermatodea_contig11986.1237.1 vs. uniprot
Match: W7TUN3_9STRA (Assimilatory sulfite reductase (ferredoxin) n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TUN3_9STRA)

HSP 1 Score: 184 bits (468), Expect = 1.190e-51
Identity = 91/158 (57.59%), Postives = 115/158 (72.78%), Query Frame = 1 
Query:   79 QLDKINILKQTSEALREPVRTQMQTEEISISHDAYQILKFHGSYMQDDRSLRKKGQEKAYSFMLRLKMPAGVCSPELYTLLDDLSREYGHGHLRLTTRQTYQLHGVAKHNLKTVIKSIMQVGSSTVGGCGDVNRNIMCTPAPIMDRPEYVYARQYTKV 552
            +L KI  LK  S+ LR P+  ++  +EI +  DA Q++K+HGSY QD+R LRK G++K YSFMLRLK PAG  +PELY ++DDL  EYG   LR TTRQ +Q+HG+ K NLKTVI SIM +GSSTVG CGDV RN+ CTPAP    P Y YAR+Y+K+
Sbjct:   79 KLAKIEQLKIRSDYLRHPLSEELDNQEIFLGTDAIQVVKYHGSYQQDNRELRKAGEQKKYSFMLRLKSPAGEVTPELYKVVDDLCSEYGQNDLRATTRQCFQIHGILKGNLKTVISSIMNIGSSTVGACGDVVRNVGCTPAPFT-APAYAYAREYSKI 235
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11986.1237.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FYK3_ECTSI6.010e-10289.47Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KR41_9PHAE5.240e-9986.36NIR_SIR_ferr domain-containing protein n=1 Tax=Ect... [more]
A0A835ZIU7_9STRA7.350e-7573.10Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z7S6_9STRA1.090e-7476.43Assimilatory sulfite reductase (ferredoxin) n=1 Ta... [more]
A0A7S2SIJ1_9STRA5.260e-5562.03Assimilatory sulfite reductase (ferredoxin) n=1 Ta... [more]
A0A1Z5JYL9_FISSO2.580e-5458.24Assimilatory sulfite reductase (ferredoxin) n=2 Ta... [more]
A0A7S3JYK4_9STRA1.840e-5358.64Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
B8BZI8_THAPS8.570e-5259.76Assimilatory sulfite reductase (ferredoxin) n=1 Ta... [more]
A0A7S4RLB8_9STRA9.060e-5259.75Assimilatory sulfite reductase (ferredoxin) n=2 Ta... [more]
W7TUN3_9STRA1.190e-5157.59Assimilatory sulfite reductase (ferredoxin) n=2 Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig11986contigS-dermatodea_contig11986:3571..7249 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score309.7
Seed ortholog evalue9.4e-82
Seed eggNOG ortholog2880.D7FYK3
Preferred nameSIR1
KEGG rclassRC00065
KEGG koko:K00381,ko:K00392,ko:K02981
KEGG ReactionR00858,R00859,R03600
KEGG Pathwayko00920,ko01100,ko01120,ko03010,map00920,map01100,map01120,map03010
KEGG ModuleM00176,M00177
GOsGO:0000096,GO:0000097,GO:0000103,GO:0000322,GO:0000323,GO:0000324,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003824,GO:0005488,GO:0005507,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0006082,GO:0006275,GO:0006323,GO:0006355,GO:0006520,GO:0006790,GO:0006807,GO:0006950,GO:0006970,GO:0006996,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009266,GO:0009295,GO:0009337,GO:0009403,GO:0009404,GO:0009409,GO:0009507,GO:0009526,GO:0009532,GO:0009536,GO:0009570,GO:0009628,GO:0009651,GO:0009889,GO:0009890,GO:0009892,GO:0009941,GO:0009987,GO:0010319,GO:0010468,GO:0010494,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016002,GO:0016020,GO:0016043,GO:0016053,GO:0016491,GO:0016667,GO:0016673,GO:0017144,GO:0019219,GO:0019222,GO:0019418,GO:0019419,GO:0019424,GO:0019748,GO:0019752,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031967,GO:0031975,GO:0032991,GO:0035770,GO:0036385,GO:0036464,GO:0042644,GO:0042646,GO:0043167,GO:0043169,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0044550,GO:0045892,GO:0045934,GO:0046394,GO:0046872,GO:0046914,GO:0048046,GO:0048519,GO:0048523,GO:0050311,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051276,GO:0055114,GO:0060255,GO:0065007,GO:0070813,GO:0070814,GO:0071103,GO:0071704,GO:0071840,GO:0071944,GO:0080090,GO:0097159,GO:1900160,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1902679,GO:1903506,GO:1903507,GO:1990904,GO:2000112,GO:2000113,GO:2001141
EggNOG free text desc.sulfite reductase (ferredoxin) activity
EggNOG OGsCOG0155@1,KOG0560@2759
EC1.8.1.2,1.8.7.1
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01610,ko00000,ko00001,ko00002,ko01000,ko03011
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionSulfite reductase
Ec32 orthologEc-02_004340.1
Exons3
Model size561
Cds size561
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig11986.1237.1prot_S-dermatodea_contig11986.1237.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig11986 3571..7249 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924225.8606095-CDS-S-dermatodea_contig11986:3570..38221622924225.8606095-CDS-S-dermatodea_contig11986:3570..3822Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11986 3571..3822 +
1694079107.4193835-CDS-S-dermatodea_contig11986:3570..38221694079107.4193835-CDS-S-dermatodea_contig11986:3570..3822Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11986 3571..3822 +
1622924225.8743353-CDS-S-dermatodea_contig11986:5539..57131622924225.8743353-CDS-S-dermatodea_contig11986:5539..5713Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11986 5540..5713 +
1694079107.429433-CDS-S-dermatodea_contig11986:5539..57131694079107.429433-CDS-S-dermatodea_contig11986:5539..5713Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11986 5540..5713 +
1622924225.884485-CDS-S-dermatodea_contig11986:7114..72491622924225.884485-CDS-S-dermatodea_contig11986:7114..7249Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11986 7115..7249 +
1694079107.4367414-CDS-S-dermatodea_contig11986:7114..72491694079107.4367414-CDS-S-dermatodea_contig11986:7114..7249Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11986 7115..7249 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig11986.1237.1

>prot_S-dermatodea_contig11986.1237.1 ID=prot_S-dermatodea_contig11986.1237.1|Name=mRNA_S-dermatodea_contig11986.1237.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=187bp
PNVHREPQPIAPRVALSPAVPKNNLPQLDKINILKQTSEALREPVRTQMQ
TEEISISHDAYQILKFHGSYMQDDRSLRKKGQEKAYSFMLRLKMPAGVCS
PELYTLLDDLSREYGHGHLRLTTRQTYQLHGVAKHNLKTVIKSIMQVGSS
TVGGCGDVNRNIMCTPAPIMDRPEYVYARQYTKVCR*
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mRNA from alignment at S-dermatodea_contig11986:3571..7249+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig11986.1237.1 ID=mRNA_S-dermatodea_contig11986.1237.1|Name=mRNA_S-dermatodea_contig11986.1237.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=3679bp|location=Sequence derived from alignment at S-dermatodea_contig11986:3571..7249+ (Saccorhiza dermatodea SderLu1190fm monoicous)
CCAAACGTTCATCGCGAACCGCAACCGATTGCGCCGCGCGTCGCCCTCTC
TCCCGCCGTGCCAAAAAATAACCTCCCGCAGCTGGACAAGATCAACATCT
TGAAGCAGACCTCGGAGGCGCTCCGCGAGCCGGTGCGCACGCAGATGCAG
ACGGAAGAGATCTCGATCAGCCACGACGCGTACCAGATCCTCAAGTTCCA
CGGCAGCTACATGCAGGACGATCGCAGCCTTAGAAAGAAGGGGCAAGAGA
AGGTCCGTTCGTTTCTGTGTTCGTGTGTGTATGTGTGTATGTGTATGTGT
ATGTGTGTGTGTGTATTTTGTGTGTTTTATAAAAAGCGAGTGGGTAGCCA
CGGCTAGGCTACGCCCGTGAGGTGTGAGGTGTGCTTTGGCAGGACGGTGT
GTGGGTTGGGAGGGCACGGTGGCGGTAGTTCCCACGGCAGGCAGGCGTTC
ACCCGCAGAGGAAGCCGAGCGTGCGGGGGCGGGGACAAAACAAGTGTATA
GGGGTTAGTGACTTGTGTGTATTCCATATGTTTAGCATCGGCCAATTTTG
GCATCAAGGCTCCACTCTAAACTAACTCTAAAACAAACAAAGATGCAAAG
CGCTGTTAATTAATAAAGACAAAATCTGGTGCTCATGTGTGTACATCCCT
AGCTCACAGGCACACTACAAATAGTATAGTTCCAGGGTAAACCGAACGTA
GGTACGTTTAGTAAGGTATAGGTGCACGGGGGGATAGGTATATATATGGT
TTGTGTTAGCTTTTGTTTTTGTGTTGGTCCTTGTCGCGATGAGAGAGGGG
TGCGCGCACCGCGGTGGAGAGTTCTTTGAGTTGTACGGTAGGACGAGGGA
GATTTTTTCGTGCTTTCGAAAGCGGCGGAGCGTGTTAACCCTTTTGTTAC
TATTAAATGTTATGATACTATTTACGGAGGAACATACTATAGTTAACTTT
ACCAGGTCCAAATCTCATGGCCAATAATACAAAAATACCCAACTATTCCT
ATTAATACCATGAATACCCAAACAACTACAAAAATCTCATGAAAAACAAA
AACACGAGATTATATGGCCATAATCAAGAACATGGACCTCGAAATCTCGA
TAATCCCGGCCTATTTTGATTTTTCTATTTTGAGACTTGTGGTAAATTTG
GACCTGTTAACTATGGTCTAGTCCCCCGTAATAGCCCACTGTTTGGAGCG
CCGGTTAGCACGTAATGAGGCGTGCTTAAAGCGGACTCCTGGGGAACCCC
ATGGGTTATGACGCAGGAATGAGAGAACGGAGCGTAAGGGAACGGGGGCT
GTAGCTGTCGACTGGCATCGAGAGGTAGTGTTTGGTCGTTTTGGAGAGCT
CTATTAATACCGTAGTCATAATATGATAGTATTAATACTTTTACTATTAT
ATTATAGTACCAAAAGAGTTAAAATGTCAAAAGTGTTAGAACGTTACGTG
TTCCTGTTGGGTGTTTTTTTTTGTGTTACTGTAAGTGTGTCGGATTGGAC
TCGTCGTCACTTTCTCCCCCGAAGTGTATTGTGCTTGTTTATTTACTTGT
GCGACGCGCATTCTCGCGTCCTGGCGAGAGTCTCGTCGCCATCGTTAGAG
TAACAATTCCTAATGCTCGTCATATTACATTCGAAGGACGGTGGGTCGTT
AGCAAGCTCGAATCGCAAACCGGCTGGGCCGGGAATAAGACTGATACTGT
CTGTACACGCCAACGCGCAAATGCTTGAGAGAGTAGAAAAACGTTACCTT
CTACCTCCAACGACGATGGCACTATTTAGAAACAGCCTTTATTAACATAA
TGCTGTAGCGTGCGGCGAGCTTCTTGTCCCGCCGTACTTACACGCACGTG
CATCGCATAATAGGCCTAGCAGCAACCAACCGCTACGCTCCTCCGCGCCA
ACGGCCACAATGCCCGACCTGCTCGACCCGGTCCGTTCCGTTGCCTATCA
CCGCCGGCGCTCGCTCCAGGCGTACTCCTTCATGCTCCGCCTCAAGATGC
CCGCCGGCGTGTGCTCCCCGGAGTTGTACACCTTGCTGGACGACCTCTCT
AGGGAGTACGGGCACGGGCACCTCAGGCTGACCACACGGCAGACGTACCA
GCTGCACGGGGTGGCGAAGCACAACCTGAAGACCGTCATCAAGGTAGACG
GGGAGAATGGCGGGGGGCGGGCGTGATGAGGGCGGGGAGGGGAGGGGAGG
GGAGGGAAGGGGGAGGGTTATTTATGTTAAACGCATGTCGTGTGATATCC
AAAGGGACATAGACCACGCGTCCCAACAACGCCGGGACGGAGCGATATGC
CGAGTTTTCGATTCGCCGGCCAGGCTGCGTTTCTCAAGGATGATCCCAGC
TTCTAGTCAGCACCCTTGCGTTTGCGACGCCAAACGGTATGCCATCGGTT
GATGGGACATAGGGGGGGGAAGGGTAGGCCTGTATAGGTGTGTTTAACAG
CTTGAACCGTCTTTCCTTCCCTTCGTTAAGGTGGCACCCCAACACCCGCC
CAATGTTTTTAAGAGCCTTTATTGTTTCGGGGCGGGTACTCGTTCATTGA
TCGTGCATGCCGTAGTCGTTACACCATAGACCTCGTTAGACCATAGACGG
GGGGGGGGTGCTTAAATGTTTAATGCACGTCGCATCCGAACGGTCATGTA
GACAGCAGTAATATATCCCAACACCGGGACGGAGCGGTATTTATGTCACA
TTGTGTTTTTGCCGGCCAAGCTGGATTAGCTGGATTTCGCGAAGATAAAT
ACCAACTTCTGTAGCGTATCAAACATCCTTGCGGGTTGGGGCGCAAAACC
GGACATAGGACATACCTGGTAACCAAATGTCGGGCCGCGGGGGAGGGGGG
TGATTCACGCTAGGAAAGATCCATTCATAATTGTATCCCAAACAGGGCTT
GAACACCAGAAGTGTGCCGTCTCAATGTTCCAAAAAATACGTTTTGCTGT
ACGGAGGCGTGTTCGTTTTCGCCGGCGGGAACGCAGCCTAAGATCAAGAC
AACCGCCCGTGCCATATTTGATATCCCGTTACTGCGGCGCACAGGCGCGT
TCTTCCCCGTTTTACGCGTGAAATCCGGGTCGCGGTTACGGCCCCGCTCG
GTACCGCCCGTGGTTCCTGTCAAATGCCTGGGCGATGTCCCGGCCGGCGC
ATGCGTTTTGACATTCATGCGAATGTGCCACAACGCTGTCTCACTATAAA
TAGGGGGGGGGGGGGCTATTTGATGCAGTTTTCGCTCCGGAAATTGAAAA
ATTGAAAATTTCCTCTGAATATGTGTGATCTGTACCCAATTAATTTTCCA
AGCTCTCTGCCTACTGCTGTACATAGCCCGTACCGTCCTCAAGATCGATG
TCCGCCTTTGTAAATACAAGTAAGTATGATAGTGCAGCAGTAGGCGGTTT
TTACTGTAACAGGAAGTATTGTTATTCATTTTGTCGCCGGCCTGTTTTGT
TCTGACCATTTCCTTCCTTCCTTCCTTCCTTCCCCGCTCATCCGCGTGTC
CTCCTCGTGCGGCCTGGGGACGTTTTGTGGGCATTTTTTGGCAGAGCATC
ATGCAGGTCGGCTCGAGCACGGTGGGAGGTTGCGGCGACGTGAACCGCAA
CATCATGTGCACGCCGGCGCCGATCATGGACAGGCCGGAGTACGTCTACG
CGCGGCAGTACACCAAGGTTTGTCGCTGA
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Coding sequence (CDS) from alignment at S-dermatodea_contig11986:3571..7249+

>mRNA_S-dermatodea_contig11986.1237.1 ID=mRNA_S-dermatodea_contig11986.1237.1|Name=mRNA_S-dermatodea_contig11986.1237.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1122bp|location=Sequence derived from alignment at S-dermatodea_contig11986:3571..7249+ (Saccorhiza dermatodea SderLu1190fm monoicous)
CCAAACGTTCATCGCGAACCGCAACCGATTGCGCCGCGCGTCGCCCTCTC
TCCCGCCGTGCCAAAAAATAACCTCCCGCAGCTGGACAAGATCAACATCT
TGAAGCAGACCTCGGAGGCGCTCCGCGAGCCGGTGCGCACGCAGATGCAG
ACGGAAGAGATCTCGATCAGCCACGACGCGTACCAGATCCTCAAGTTCCA
CGGCAGCTACATGCAGGACGATCGCAGCCTTAGAAAGAAGGGGCAAGAGA
AGCCAAACGTTCATCGCGAACCGCAACCGATTGCGCCGCGCGTCGCCCTC
TCTCCCGCCGTGCCAAAAAATAACCTCCCGCAGCTGGACAAGATCAACAT
CTTGAAGCAGACCTCGGAGGCGCTCCGCGAGCCGGTGCGCACGCAGATGC
AGACGGAAGAGATCTCGATCAGCCACGACGCGTACCAGATCCTCAAGTTC
CACGGCAGCTACATGCAGGACGATCGCAGCCTTAGAAAGAAGGGGCAAGA
GAAGGCGTACTCCTTCATGCTCCGCCTCAAGATGCCCGCCGGCGTGTGCT
CCCCGGAGTTGTACACCTTGCTGGACGACCTCTCTAGGGAGTACGGGCAC
GGGCACCTCAGGCTGACCACACGGCAGACGTACCAGCTGCACGGGGTGGC
GAAGCACAACCTGAAGACCGTCATCAAGGCGTACTCCTTCATGCTCCGCC
TCAAGATGCCCGCCGGCGTGTGCTCCCCGGAGTTGTACACCTTGCTGGAC
GACCTCTCTAGGGAGTACGGGCACGGGCACCTCAGGCTGACCACACGGCA
GACGTACCAGCTGCACGGGGTGGCGAAGCACAACCTGAAGACCGTCATCA
AGAGCATCATGCAGGTCGGCTCGAGCACGGTGGGAGGTTGCGGCGACGTG
AACCGCAACATCATGTGCACGCCGGCGCCGATCATGGACAGGCCGGAGTA
CGTCTACGCGCGGCAGTACACCAAGGTTTGTCGCTGAAGCATCATGCAGG
TCGGCTCGAGCACGGTGGGAGGTTGCGGCGACGTGAACCGCAACATCATG
TGCACGCCGGCGCCGATCATGGACAGGCCGGAGTACGTCTACGCGCGGCA
GTACACCAAGGTTTGTCGCTGA
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