prot_S-dermatodea_contig1198.1235.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig1198.1235.1
Unique Nameprot_S-dermatodea_contig1198.1235.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length283
Homology
BLAST of mRNA_S-dermatodea_contig1198.1235.1 vs. uniprot
Match: D7G3N2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3N2_ECTSI)

HSP 1 Score: 182 bits (463), Expect = 3.110e-53
Identity = 95/131 (72.52%), Postives = 107/131 (81.68%), Query Frame = 0
Query:  153 LRFVRWLRVVLSLSKTPPAGEVVRAGLVPRLLGFLRSTESPELRPEALCALTNIASTEFTRAVALEPDAIPTLKGLLGNSDIYLREQSAWCLGNIAGDCVEMRDVVLNAGVMEALLLSLSTAQQGSTSFTR 283
            L  +RWLRVVLSLS+TPPA EVVRA LVP+L+ FLR T+   LRPEALCALTNIASTE TRAVA+EP  +P L  LL +SD+YLREQSAWCLGNIA D VEMRD+VL AGV+E LLLSLS +Q G TSF R
Sbjct:    6 LTSLRWLRVVLSLSETPPAEEVVRARLVPKLVEFLRQTDCAGLRPEALCALTNIASTECTRAVAMEPATLPALVDLLSSSDLYLREQSAWCLGNIAADGVEMRDLVLGAGVLEPLLLSLSPSQHGCTSFMR 136          
BLAST of mRNA_S-dermatodea_contig1198.1235.1 vs. uniprot
Match: A0A7S2UBR3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UBR3_9STRA)

HSP 1 Score: 112 bits (280), Expect = 1.290e-25
Identity = 63/136 (46.32%), Postives = 83/136 (61.03%), Query Frame = 0
Query:  136 MVAEAARGILGDDRVLQLRFVRWLRVVLSLSKTPPAGEVVRAGLVPRLLGFLRSTESPELRPEALCALTNIASTEFTRAVALEPDAIPTLKGLLGNSDIYLREQSAWCLGNIAGDCVEMRDVVLNAGVMEALLLSL 271
            M+    + ++GD  VL L  VR  R +LSL   PP   V+  G +P  +  L   + P ++ EA  ALTN+ASTEFT  V +E +A+P L  LL + D  +REQ AWCLGNIAGD   +RD VLN G ME LLL++
Sbjct:   80 MLLPGMQNLMGDKEVL-LESVRGFRRMLSLEINPPVAAVMNCGALPLFVQMLNLNDHPTIQFEAAWALTNVASTEFTSKV-VEANALPALVALLRSPDADVREQCAWCLGNIAGDSPPLRDTVLNCGAMEPLLLNI 213          
BLAST of mRNA_S-dermatodea_contig1198.1235.1 vs. uniprot
Match: A0A6S9FIN1_HETAK (Importin subunit alpha n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9FIN1_HETAK)

HSP 1 Score: 113 bits (282), Expect = 1.040e-24
Identity = 62/130 (47.69%), Postives = 84/130 (64.62%), Query Frame = 0
Query:  143 GILGDDRVLQLRFVRWLRVVLSLSKTPPAGEVVRAGLVPRLLGFLRSTESPELRPEALCALTNIASTEFTRAVALEPDAIPTLKGLLGNSDIYLREQSAWCLGNIAGDCVEMRDVVLNAGVMEALLLSLS 272
            GI   D  + +   R  R +LS+   PP  +V+ AG++  L+  L  T+S EL+ EA  ALTNIASTE T AV +E  A+P L  LL ++   LREQSAWCLGNIAGDC E RD++L AG +  LL++++
Sbjct:   79 GIQSSDLAVLIESTRGFRRLLSVETNPPVQDVLAAGVLDTLISLLGRTDSSELQFEAAWALTNIASTEHT-AVVVEHGAVPGLVALLTHAKGDLREQSAWCLGNIAGDCTEFRDMILQAGGLNPLLMNIA 207          
BLAST of mRNA_S-dermatodea_contig1198.1235.1 vs. uniprot
Match: A0A7S2XZ26_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZ26_9STRA)

HSP 1 Score: 104 bits (259), Expect = 3.130e-23
Identity = 62/145 (42.76%), Postives = 87/145 (60.00%), Query Frame = 0
Query:  134 PEMVAEAARGILGDDRVLQLRFVRWLRVVLSLSKTPPAGEVVRAGLVPRLLGFLRSTESPELRPEALCALTNIASTEFTRAVALEPDAIPTLKGLLGNSDIYLREQSAWCLGNIAGDCVEMRDVVLNAGVMEALLLSLSTAQQGS 278
            P++VA    G+   +   Q+   +  R +LS    PP  EV+ A ++   + FL   +S EL+ EA   LTNIAST+ T AV +E  A+P L  LL + +  +REQSAWCLGNI+GDC E+RD VL +G +E LLL++S     S
Sbjct:   74 PKLVA----GVKSSELQQQVDSTKGFRRLLSAENNPPVDEVLAAQVIDIFVLFLSREDSAELQFEAAWTLTNIASTDKT-AVVVEHGAVPPLVKLLTSQNADVREQSAWCLGNISGDCTELRDQVLASGALEPLLLNISQPANAS 213          
BLAST of mRNA_S-dermatodea_contig1198.1235.1 vs. uniprot
Match: A0A7S4J1Y9_9STRA (Hypothetical protein (Fragment) n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J1Y9_9STRA)

HSP 1 Score: 107 bits (268), Expect = 5.800e-23
Identity = 57/117 (48.72%), Postives = 78/117 (66.67%), Query Frame = 0
Query:  156 VRWLRVVLSLSKTPPAGEVVRAGLVPRLLGFLRSTESPELRPEALCALTNIASTEFTRAVALEPDAIPTLKGLLGNSDIYLREQSAWCLGNIAGDCVEMRDVVLNAGVMEALLLSLS 272
            VR  R +LS+   PP   V+  G +   +  L+  ++P+++ EA  ALTN+ASTE TR V +E  A+P L  LL + D  +REQ AWCLGNIAGDC E+RD VL AG ME+LLL+++
Sbjct:  128 VRGFRRMLSVEVNPPVEPVIECGALSLFVSCLQYHDNPKIQFEAAWALTNVASTERTRTV-VECGALPHLVALLRSGDADVREQCAWCLGNIAGDCTELRDAVLEAGAMESLLLNIA 243          
BLAST of mRNA_S-dermatodea_contig1198.1235.1 vs. uniprot
Match: UPI000539A5F0 (importin subunit alpha-5-like n=3 Tax=Camelina sativa TaxID=90675 RepID=UPI000539A5F0)

HSP 1 Score: 107 bits (267), Expect = 1.170e-22
Identity = 62/138 (44.93%), Postives = 84/138 (60.87%), Query Frame = 0
Query:  137 VAEAARGILGDDRVLQLRFVRWLRVVLSLSKTPPAGEVVRAGLVPRLLGFLRSTESPELRPEALCALTNIAS--TEFTRAVALEPDAIPTLKGLLGNSDIYLREQSAWCLGNIAGDCVEMRDVVLNAGVMEALLLSLS 272
            V++   G+  DD  LQL      R VLSL +TPP   V++ G+VPR + FL+  + P L+ EA  ALTNIAS  +E T+ V ++  A+P    LL + D  +REQ+ W LGN+AGD V  RD VLN+G M  LL  L+
Sbjct:   70 VSDMIAGVFSDDPSLQLESTIRFRRVLSLERTPPIDSVIKCGVVPRFVEFLKKDDYPRLQFEAAWALTNIASGTSEHTKVV-IDLGAVPLFVQLLASPDNDVREQALWGLGNVAGDSVHCRDFVLNSGAMTPLLHQLN 206          
BLAST of mRNA_S-dermatodea_contig1198.1235.1 vs. uniprot
Match: A0A7S2BTP8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BTP8_9STRA)

HSP 1 Score: 105 bits (262), Expect = 2.490e-22
Identity = 59/125 (47.20%), Postives = 75/125 (60.00%), Query Frame = 0
Query:  144 ILGDDRVLQLRFVRWLRVVLSLSKTPPAGEVVRAGLVPRLLGFLRSTESPELRPEALCALTNIASTEFTRAVALEPDAIPTLKGLLGNSDIYLREQSAWCLGNIAGDCVEMRDVVLNAGVMEALL 268
            I   D  ++L   +  R VLSL K PP  EV+  G++P L+  L+S +SPEL+ EA  ALTNIAST+ TR V            LL  S   +REQ AWCL NIAGDC E+RD V+ +G M+ LL
Sbjct:   88 IQSSDPQIRLDATKGFRKVLSLVKNPPVREVIDTGVLPILIQLLQSVDSPELQFEAAWALTNIASTDMTRIVXXXXXXXXXXXXLLSQSP-DVREQCAWCLSNIAGDCAELRDFVIQSGAMQPLL 211          
BLAST of mRNA_S-dermatodea_contig1198.1235.1 vs. uniprot
Match: A0A4Y1RQC6_PRUDU (Importin alpha isoform 4 n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A4Y1RQC6_PRUDU)

HSP 1 Score: 102 bits (254), Expect = 4.180e-22
Identity = 57/140 (40.71%), Postives = 82/140 (58.57%), Query Frame = 0
Query:  135 EMVAEAARGILGDDRVLQLRFVRWLRVVLSLSKTPPAGEVVRAGLVPRLLGFLRSTESPELRPEALCALTNIAS--TEFTRAVALEPDAIPTLKGLLGNSDIYLREQSAWCLGNIAGDCVEMRDVVLNAGVMEALLLSLS 272
            E +    +G+  DD  LQL      R +LS+ ++PP  EV++AG VPR + FL   + P+L+ EA  ALTN+AS  ++ TR V +E  A+P    LL +    +REQ+ W LGN+AGD    RD+VL  G +  LL  L+
Sbjct:   89 ESIPSMVQGVWSDDPALQLEATTQFRKLLSIERSPPIDEVIKAGAVPRFVEFLGRHDMPQLQFEAAWALTNVASGTSDHTRVV-IEYGAVPMFVQLLSSGSDDVREQAVWALGNVAGDSPSCRDLVLGQGALMPLLAQLN 227          
BLAST of mRNA_S-dermatodea_contig1198.1235.1 vs. uniprot
Match: A0A7J0DBG4_9ERIC (Importin alpha isoform 4 n=1 Tax=Actinidia rufa TaxID=165716 RepID=A0A7J0DBG4_9ERIC)

HSP 1 Score: 102 bits (253), Expect = 4.320e-22
Identity = 57/142 (40.14%), Postives = 84/142 (59.15%), Query Frame = 0
Query:  133 TPEMVAEAARGILGDDRVLQLRFVRWLRVVLSLSKTPPAGEVVRAGLVPRLLGFLRSTESPELRPEALCALTNIAS--TEFTRAVALEPDAIPTLKGLLGNSDIYLREQSAWCLGNIAGDCVEMRDVVLNAGVMEALLLSLS 272
            T E +    +G+  +D   Q+      R +LS+ ++PP  EV++AG+VPR + FL   + P+L+ EA  ALTN+AS  +E TR V +E  A+P    LL +S   +REQ+ W LGN+AGD    RD+VL  G +  LL  L+
Sbjct:    4 TLESIPSMVQGVWSEDPAAQIEATTQFRKLLSIERSPPIDEVIKAGVVPRFVEFLGRHDLPQLQFEAAWALTNVASGTSEHTRVV-IEQGAVPQFVQLLSSSSDDVREQAVWALGNVAGDSPSCRDLVLGHGALLPLLAQLN 144          
BLAST of mRNA_S-dermatodea_contig1198.1235.1 vs. uniprot
Match: A0A251NZM8_PRUPE (IBB domain-containing protein n=8 Tax=Prunus TaxID=3754 RepID=A0A251NZM8_PRUPE)

HSP 1 Score: 102 bits (255), Expect = 2.450e-21
Identity = 57/140 (40.71%), Postives = 82/140 (58.57%), Query Frame = 0
Query:  135 EMVAEAARGILGDDRVLQLRFVRWLRVVLSLSKTPPAGEVVRAGLVPRLLGFLRSTESPELRPEALCALTNIAS--TEFTRAVALEPDAIPTLKGLLGNSDIYLREQSAWCLGNIAGDCVEMRDVVLNAGVMEALLLSLS 272
            E +    +G+  DD  LQL      R +LS+ ++PP  EV++AG VPR + FL   + P+L+ EA  ALTN+AS  ++ TR V +E  A+P    LL +    +REQ+ W LGN+AGD    RD+VL  G +  LL  L+
Sbjct:   75 ESIPSMVQGVWSDDPALQLEATTQFRKLLSIERSPPIDEVIKAGAVPRFVEFLGRHDMPQLQFEAAWALTNVASGTSDHTRVV-IEHGAVPMFVQLLSSGSDDVREQAVWALGNVAGDSPSCRDLVLGQGALMPLLAQLN 213          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1198.1235.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G3N2_ECTSI3.110e-5372.52Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2UBR3_9STRA1.290e-2546.32Hypothetical protein (Fragment) n=1 Tax=Attheya se... [more]
A0A6S9FIN1_HETAK1.040e-2447.69Importin subunit alpha n=1 Tax=Heterosigma akashiw... [more]
A0A7S2XZ26_9STRA3.130e-2342.76Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A7S4J1Y9_9STRA5.800e-2348.72Hypothetical protein (Fragment) n=2 Tax=Odontella ... [more]
UPI000539A5F01.170e-2244.93importin subunit alpha-5-like n=3 Tax=Camelina sat... [more]
A0A7S2BTP8_9STRA2.490e-2247.20Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A4Y1RQC6_PRUDU4.180e-2240.71Importin alpha isoform 4 n=1 Tax=Prunus dulcis Tax... [more]
A0A7J0DBG4_9ERIC4.320e-2240.14Importin alpha isoform 4 n=1 Tax=Actinidia rufa Ta... [more]
A0A251NZM8_PRUPE2.450e-2140.71IBB domain-containing protein n=8 Tax=Prunus TaxID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000225ArmadilloSMARTSM00185arm_5coord: 209..249
e-value: 8.3
score: 13.9
coord: 167..208
e-value: 8.4E-5
score: 32.0
IPR000225ArmadilloPFAMPF00514Armcoord: 210..248
e-value: 3.8E-5
score: 23.6
coord: 171..208
e-value: 1.4E-5
score: 25.0
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 117..283
e-value: 3.4E-36
score: 126.6
NoneNo IPR availablePANTHERPTHR23316:SF70IMPORTIN SUBUNIT ALPHA-RELATEDcoord: 138..273
NoneNo IPR availablePANTHERPTHR23316IMPORTIN ALPHAcoord: 138..273
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 119..272

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig1198contigS-dermatodea_contig1198:16315..22042 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig1198.1235.1mRNA_S-dermatodea_contig1198.1235.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig1198 16315..22042 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig1198.1235.1 ID=prot_S-dermatodea_contig1198.1235.1|Name=mRNA_S-dermatodea_contig1198.1235.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=283bp
TSERKPGERRSRSLRRKSAPEEDVIETVRRGQQGRRRMSDTHRRKSKTKA
AARRRERSELRPPLPGHPGIGRASLPSRLPAPMIRVRAEPAEQPAVAAAV
VHRPANTAADVGKTDLVQPMDEDDKEDDGARWTPEMVAEAARGILGDDRV
LQLRFVRWLRVVLSLSKTPPAGEVVRAGLVPRLLGFLRSTESPELRPEAL
CALTNIASTEFTRAVALEPDAIPTLKGLLGNSDIYLREQSAWCLGNIAGD
CVEMRDVVLNAGVMEALLLSLSTAQQGSTSFTR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000225Armadillo
IPR011989ARM-like
IPR016024ARM-type_fold