prot_S-dermatodea_contig11977.1234.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig11977.1234.1
Unique Nameprot_S-dermatodea_contig11977.1234.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length255
Homology
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BLAST of mRNA_S-dermatodea_contig11977.1234.1 vs. uniprot
Match: D7FM35_ECTSI (tRNA-dihydrouridine synthase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FM35_ECTSI)

HSP 1 Score: 410 bits (1053), Expect = 3.370e-141
Identity = 196/243 (80.66%), Postives = 217/243 (89.30%), Query Frame = 0 
Query:    1 MIRKVTRTPITVKCRIGVDDKDSYEEFTAFVRAVKAAGVDHVIVHARKCLLNGLSTSANRTVPPLRYDVVHRLALEFPELEIVLNGGVDNLEAVNDHLLGRGEWGGYGGGVAGVMVGRAAYFDPWTFRHTDSAVFGSTNPGFTRREIMERCVDTFNDYMQEGRLEGPERNKTRPQCLGTLLKPLGYLSSGARGSRKFRQELGRAVQADSKIDPDGEVFREVVEEAMNLMPDEILDEPVGDSAE 243
            MIRKVTRTP+TVKCRIGVDDKDSY+E T FVRAVKAAG+DHV+VHARKCLL GLSTSANRT+PPLRYDVVHRLA EFPELEIVLNGG+D+L AVN+H+ G GEWG YGGGVAGVMVGRAAYFDPWTFRHTDSAVFGS++PGFTRREIMERCVD F + MQEGR EGPE N+TR  CLGT+ KPLGYLSSGARGSR FRQEL RAVQA SKIDPD + FR+ V+ AM L+P+ +LDEPVGD+ E
Sbjct:  127 MIRKVTRTPVTVKCRIGVDDKDSYDELTTFVRAVKAAGIDHVVVHARKCLLKGLSTSANRTIPPLRYDVVHRLAQEFPELEIVLNGGIDSLGAVNEHITGTGEWGEYGGGVAGVMVGRAAYFDPWTFRHTDSAVFGSSDPGFTRREIMERCVDRFTEMMQEGRREGPECNRTRHLCLGTVTKPLGYLSSGARGSRTFRQELSRAVQAQSKIDPDTDDFRDAVDRAMALLPEGVLDEPVGDTPE 369
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BLAST of mRNA_S-dermatodea_contig11977.1234.1 vs. uniprot
Match: A0A8K1CQW7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CQW7_PYTOL)

HSP 1 Score: 186 bits (472), Expect = 9.770e-54
Identity = 116/248 (46.77%), Postives = 153/248 (61.69%), Query Frame = 0 
Query:    1 MIRKV---TRTP-ITVKCRIGVDDKDSYEEFTAFVRAVKAAGVDHVIVHARKCLLNGLSTSANRTVPPLRYDVVHRLALEFPELEIVLNGGVDNLEAVNDHLLGRGEWGGYGGGVAGVMVGRAAYFDPWTFRHTDSAVFG-STNPGFTRREIMERCVDTFNDYMQEGRLEGPERNKTRPQCLGT--LLKPLGYLSSGARGSRKFRQELGRAVQAD-SKIDPDGEVFREVVEEAMNLMPDEILDEPVGD 240
            MIR+V   T  P +TVKCRIGVDD DSYEE   F+  V +AGV H IVHARKCLLNGLST  NRT+PPL+YD V+RL  +FPEL   LNGGV +++   + L        Y   + GVM+GRAAY  PW FR  D  +FG ++NP  +RREI+   +D   D   +  +  P  +   P C+ T  L+KPL  L SGA G + F+    RA+ A  ++  P  E+ RE++E A+ ++PDE+LD  V D
Sbjct:  114 MIRQVAPSTNVPEVTVKCRIGVDDHDSYEELHHFITTVASAGVTHFIVHARKCLLNGLSTHENRTIPPLKYDWVYRLKEDFPELFFTLNGGVQSIQHAKELLDTT-----Y---IDGVMIGRAAYNTPWNFRDADRLIFGEASNPNLSRREIIADYLDYAEDMQTKWGVTEPITDV--PYCMPTSALMKPLLALFSGAAGGKAFK----RAISAQFAQRGPKPEI-RELIETALAVVPDEVLDLRVED 346
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BLAST of mRNA_S-dermatodea_contig11977.1234.1 vs. uniprot
Match: H3GP67_PHYRM (Dus domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GP67_PHYRM)

HSP 1 Score: 186 bits (471), Expect = 1.530e-53
Identity = 104/232 (44.83%), Postives = 138/232 (59.48%), Query Frame = 0 
Query:   10 ITVKCRIGVDDKDSYEEFTAFVRAVKAAGVDHVIVHARKCLLNGLSTSANRTVPPLRYDVVHRLALEFPELEIVLNGGVDNLEAVNDHLLGRGEWGGYGGGVAGVMVGRAAYFDPWTFRHTDSAVFGST-NPGFTRREIMERCVDTFNDYMQEGRLEGPERNKTRPQCLGTLLKPLGYLSSGARGSRKFRQELGRAVQADSKIDPDGEVFREVVEEAMNLMPDEILDEPVGD 240
            +TVKCRIGVDD DSYEE   FV  V +AGV H+IVHARKC+L GLST  NRT+PPLRYDVV++L  +FPEL   LNGGV +++   + L            V GVM+GRAAY  PW FR  D  +F +  NP  +RREI+ER ++   +   +     P  +         L+KPL  L +G  G + F++E+  A  A     P+    RE++E AM ++PDE+LD  V D
Sbjct:  119 VTVKCRIGVDDCDSYEELHHFVATVASAGVRHIIVHARKCILKGLSTKDNRTIPPLRYDVVYQLKQDFPELSFTLNGGVQSIQHARELLDTTN--------VDGVMIGRAAYNTPWNFRDADRLIFNAERNPNLSRREIIERYLEYAENLQAKWGSTVPLGDSPYTMATSALMKPLLALFNGEIGGKAFKREIS-AQWAKKGPRPE---LREMIENAMKVLPDEVLDARVED 338
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BLAST of mRNA_S-dermatodea_contig11977.1234.1 vs. uniprot
Match: G4ZWL3_PHYSP (Dus domain-containing protein n=25 Tax=Peronosporaceae TaxID=4777 RepID=G4ZWL3_PHYSP)

HSP 1 Score: 186 bits (471), Expect = 2.660e-53
Identity = 105/232 (45.26%), Postives = 136/232 (58.62%), Query Frame = 0 
Query:   10 ITVKCRIGVDDKDSYEEFTAFVRAVKAAGVDHVIVHARKCLLNGLSTSANRTVPPLRYDVVHRLALEFPELEIVLNGGVDNLEAVNDHLLGRGEWGGYGGGVAGVMVGRAAYFDPWTFRHTDSAVFGST-NPGFTRREIMERCVDTFNDYMQEGRLEGPERNKTRPQCLGTLLKPLGYLSSGARGSRKFRQELGRAVQADSKIDPDGEVFREVVEEAMNLMPDEILDEPVGD 240
            +TVKCRIGVDD DSYEE   +V +V  AGV H+IVHARKCLL GLST  NRT+PPLRYDVV+RL  +FPEL   LNGGV +++   + L            V GVM+GRAAY  PW FR  D  +F +  NP  +RREI+ R +D       +     P  +         L+KPL  L +G  G + F++E+  A  A     P+    RE++E AM ++PDE+LD  V D
Sbjct:  147 VTVKCRIGVDDCDSYEELHHYVSSVTEAGVRHIIVHARKCLLKGLSTKDNRTIPPLRYDVVYRLKQDFPELSFTLNGGVQSIQHARELLDTTN--------VDGVMIGRAAYNTPWNFRDADRLIFNAERNPNLSRREIIARYLDYAEGLQAKWGSTEPLSDSPYTMATSALMKPLLSLFNGEFGGKAFKREIS-AQWAKKGPRPE---LREMIESAMKVLPDEVLDARVED 366
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BLAST of mRNA_S-dermatodea_contig11977.1234.1 vs. uniprot
Match: A0A484ECZ8_BRELC (Dus domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484ECZ8_BRELC)

HSP 1 Score: 182 bits (463), Expect = 4.440e-52
Identity = 99/232 (42.67%), Postives = 137/232 (59.05%), Query Frame = 0 
Query:   10 ITVKCRIGVDDKDSYEEFTAFVRAVKAAGVDHVIVHARKCLLNGLSTSANRTVPPLRYDVVHRLALEFPELEIVLNGGVDNLEAVNDHLLGRGEWGGYGGGVAGVMVGRAAYFDPWTFRHTDSAVFGST-NPGFTRREIMERCVDTFNDYMQEGRLEGPERNKTRPQCLGTLLKPLGYLSSGARGSRKFRQELGRAVQADSKIDPDGEVFREVVEEAMNLMPDEILDEPVGD 240
            +++KCRIGVDD DSYEE   FV    +AGV H IVHARKCLL GLST  NRT+PPLRYDVV+RL  +FP+L   LNGGV +++   + L              G+M+GRAAY +PW FR  D  +F +  NP  +RREI+ER ++   +  ++     P            L+KPL  L +G  G + F++E+  A  A     P+    RE++E A+ ++PD++LDE V D
Sbjct:  152 VSIKCRIGVDDNDSYEELHYFVATAASAGVRHFIVHARKCLLKGLSTKENRTIPPLRYDVVYRLKQDFPDLSFTLNGGVQSIQHARELLNTTN--------ADGIMIGRAAYNNPWNFRDADRLIFDADRNPNLSRREIIERYLNYAEELQEKWGSNEPLSGSPYTMATSMLMKPLLSLFNGEFGGKAFKREVS-AQWAKKGPRPE---LREMIENAIKVLPDKVLDERVED 371
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BLAST of mRNA_S-dermatodea_contig11977.1234.1 vs. uniprot
Match: K3X2Z4_GLOUD (tRNA-dihydrouridine synthase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X2Z4_GLOUD)

HSP 1 Score: 181 bits (460), Expect = 7.970e-52
Identity = 109/245 (44.49%), Postives = 144/245 (58.78%), Query Frame = 0 
Query:    1 MIRKV---TRTP-ITVKCRIGVDDKDSYEEFTAFVRAVKAAGVDHVIVHARKCLLNGLSTSANRTVPPLRYDVVHRLALEFPELEIVLNGGVDNLEAVNDHLLGRGEWGGYGGGVAGVMVGRAAYFDPWTFRHTDSAVFGST-NPGFTRREIMERCVDTFNDYMQEGRLEGPERNKTRPQCLGTLLKPLGYLSSGARGSRKFRQELGRAVQADSKIDPDGEVFREVVEEAMNLMPDEILDEPVGD 240
            MIR V   T  P +TVKCRIGVDD DSYEE   FV  V ++GV H IVHARKC+L GLS   NRTVPPL+YD V+RL  +FP+L   LNGGV +++   + LL           + GVM+GRAAY  PW FR  D  +FG+  NP  +RREI+E+ +D  +D   +     P           TL+KPL  L +G  G + +++E+       S   P  E+ RE++E AM ++PDE+LD  V D
Sbjct:  129 MIRNVAPSTNVPDVTVKCRIGVDDHDSYEELHHFVTTVASSGVKHFIVHARKCILKGLSPHENRTVPPLKYDFVYRLKADFPDLLFTLNGGVASIQHAKE-LLDETN-------IDGVMIGRAAYNTPWNFRDADRLIFGAERNPNLSRREIVEKYLDYADDLQAKWGSTVPLGKLNYTMRTSTLMKPLLTLFNGEYGGKAYKREI---TARWSHKGPRPEL-REMIESAMKVLPDEVLDARVED 361
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BLAST of mRNA_S-dermatodea_contig11977.1234.1 vs. uniprot
Match: A0A2D4CBW8_PYTIN (tRNA-dihydrouridine synthase, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CBW8_PYTIN)

HSP 1 Score: 179 bits (455), Expect = 4.770e-51
Identity = 97/227 (42.73%), Postives = 131/227 (57.71%), Query Frame = 0 
Query:   10 ITVKCRIGVDDKDSYEEFTAFVRAVKAAGVDHVIVHARKCLLNGLSTSANRTVPPLRYDVVHRLALEFPELEIVLNGGVDNLEAVNDHLLGRGEWGGYGGGVAGVMVGRAAYFDPWTFRHTDSAVFGST-NPGFTRREIMERCVDTFNDYMQEGRLEGPERNKTRPQCLGTLLKPLGYLSSGARGSRKFRQELGRAVQADSKIDPDGEVFREVVEEAMNLMPDEILD 235
            +TVKCRIGVDD DSYEE   F+  V A+GV H +VHARKCLLNGLS   NRT+PPLRYD V+RL  +FP L   LNGGV +++     L            + GVM+GRAAY+ PW FR  D  +FG   NP  +RREI+ + +D   D  ++     P            L+KPL  L +G  G + F++ +       S   P+    RE++EEA+ ++PD++LD
Sbjct:  139 VTVKCRIGVDDHDSYEELHHFIDTVAASGVRHFVVHARKCLLNGLSPHENRTIPPLRYDWVYRLKDDFPHLRFTLNGGVQSIQHAKQLLDATR--------LDGVMIGRAAYYTPWNFRDADRLLFGEARNPNLSRREIIAQYLDYAEDLQRKWGATEPISEIPYHMPTSALMKPLLGLFAGESGGKAFKRAIAARFADKSLPKPE---IRELIEEAIKVVPDDVLD 354
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BLAST of mRNA_S-dermatodea_contig11977.1234.1 vs. uniprot
Match: M4BKI6_HYAAE (Dus domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BKI6_HYAAE)

HSP 1 Score: 175 bits (444), Expect = 1.600e-50
Identity = 101/233 (43.35%), Postives = 136/233 (58.37%), Query Frame = 0 
Query:   10 ITVKCRIGVDDKDSYEEFTAFVRAVKAAGVDHVIVHARKCLLNGLSTSANRTVPPLRYDVVHRLALEFPELEIVLNGGVDNLEAVNDHLLGRGEWGGYGGGVAGVMVGRAAYFDPWTFRHTDSAVFGST-NPGFTRREIMERCVDTFNDYMQEGRLEGPERNKTRPQCLGTLLKPLGYLSSGARGSRKFRQELGRAVQAD-SKIDPDGEVFREVVEEAMNLMPDEILDEPVGD 240
            +TVKCRIGVDD DSYEE   ++ +V  AGV H IVHARKC L GLST  NRT+PPLRY+VV++L  +FPEL   LNGGV +++   + L            V GVM+GRAAY  PW FR  D  +F +  NP  +RREI+ER +    D   +     P            LLKPL  L +G  G + F+    R++ A  ++  P  E+ R+++E A+ ++PDE+LD  V D
Sbjct:   32 MTVKCRIGVDDCDSYEELHHYIASVARAGVRHFIVHARKCFLKGLSTKDNRTIPPLRYEVVYQLKQDFPELLFTLNGGVQSIQHARELLDTTN--------VDGVMIGRAAYNTPWNFRDADRLIFSAERNPNLSRREIIERYLTYAEDLQSKWGSTKPLSESPYTMATSALLKPLLALFNGEIGGKAFK----RSISAQWARKGPRAEL-RDMIENAVKVLPDEVLDARVED 251
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BLAST of mRNA_S-dermatodea_contig11977.1234.1 vs. uniprot
Match: A0A0P1AFC1_PLAHL (Dus-domain-containing protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AFC1_PLAHL)

HSP 1 Score: 178 bits (452), Expect = 1.920e-50
Identity = 101/232 (43.53%), Postives = 135/232 (58.19%), Query Frame = 0 
Query:   10 ITVKCRIGVDDKDSYEEFTAFVRAVKAAGVDHVIVHARKCLLNGLSTSANRTVPPLRYDVVHRLALEFPELEIVLNGGVDNLEAVNDHLLGRGEWGGYGGGVAGVMVGRAAYFDPWTFRHTDSAVFGST-NPGFTRREIMERCVDTFNDYMQEGRLEGPERNKTRPQCLGTLLKPLGYLSSGARGSRKFRQELGRAVQADSKIDPDGEVFREVVEEAMNLMPDEILDEPVGD 240
            +TVKCRIGVDD DSYEE   +V  V +AGV H+IVHARKCLL GLS   NRTVPPLRYDVV+RL  +FPEL   LNGGV +++   + L            V G+M+GRAAY  PW FR  D  +F +  NP  +RREI+++ ++   +   +     P            L+KPL  L +G  G + F++E+  A  A     P+    RE+VE A+ ++P E+LD  V D
Sbjct:  144 VTVKCRIGVDDCDSYEELHHYVTMVASAGVRHIIVHARKCLLKGLSPKENRTVPPLRYDVVYRLKQDFPELYFTLNGGVQSIQHARELLNSTN--------VDGIMIGRAAYNSPWNFRDADRLIFNADRNPNLSRREIIQKYLEYAENLQDKWGSSKPLSELPYTMATSALMKPLLTLFNGEIGGKAFKREIS-AQWARKGQRPE---LREMVENALKVIPVEVLDARVED 363
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BLAST of mRNA_S-dermatodea_contig11977.1234.1 vs. uniprot
Match: A0A5D6XXI5_9STRA (Dus domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XXI5_9STRA)

HSP 1 Score: 176 bits (447), Expect = 7.030e-50
Identity = 102/232 (43.97%), Postives = 134/232 (57.76%), Query Frame = 0 
Query:   10 ITVKCRIGVDDKDSYEEFTAFVRAVKAAGVDHVIVHARKCLLNGLSTSANRTVPPLRYDVVHRLALEFPELEIVLNGGVDNLEAVNDHLLGRGEWGGYGGGVAGVMVGRAAYFDPWTFRHTDSAVFGST-NPGFTRREIMERCVDTFNDYMQEGRLEGPERNKTRPQCLGTLLKPLGYLSSGARGSRKFRQELGRAVQADSKIDPDGEVFREVVEEAMNLMPDEILDEPVGD 240
            ITVKCRIGVD+ DSYEE   F+  V + GV H IVHARKC+L GLS   NRTVPPL+Y+VV+RL  +FPEL   LNGGV +++     LL           + GVM+GRAAY  PW FR  D  +FG   NP  +RREI+ + ++   +         P           TL+KPL  L +G  GS+ +++E+         I P+    RE+VEEA+ L+PDE+LD  V D
Sbjct:  143 ITVKCRIGVDNHDSYEELHEFISTVASCGVQHFIVHARKCILKGLSPHENRTVPPLKYNVVYRLKTDFPELRFTLNGGVASIQDAKQ-LLDETN-------IDGVMIGRAAYNTPWNFRDADRLIFGEERNPNLSRREIVAKYLEYAEELQATWGSTVPIGPLRYTMRTSTLIKPLLALFNGEYGSKAYKREITAQWGKKGPI-PE---LREIVEEAVKLIPDEVLDARVED 362
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11977.1234.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FM35_ECTSI3.370e-14180.66tRNA-dihydrouridine synthase n=2 Tax=Ectocarpus Ta... [more]
A0A8K1CQW7_PYTOL9.770e-5446.77Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
H3GP67_PHYRM1.530e-5344.83Dus domain-containing protein n=1 Tax=Phytophthora... [more]
G4ZWL3_PHYSP2.660e-5345.26Dus domain-containing protein n=25 Tax=Peronospora... [more]
A0A484ECZ8_BRELC4.440e-5242.67Dus domain-containing protein n=1 Tax=Bremia lactu... [more]
K3X2Z4_GLOUD7.970e-5244.49tRNA-dihydrouridine synthase n=1 Tax=Globisporangi... [more]
A0A2D4CBW8_PYTIN4.770e-5142.73tRNA-dihydrouridine synthase, putative n=1 Tax=Pyt... [more]
M4BKI6_HYAAE1.600e-5043.35Dus domain-containing protein n=1 Tax=Hyaloperonos... [more]
A0A0P1AFC1_PLAHL1.920e-5043.53Dus-domain-containing protein n=1 Tax=Plasmopara h... [more]
A0A5D6XXI5_9STRA7.030e-5043.97Dus domain-containing protein n=1 Tax=Pythium bras... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013785Aldolase-type TIM barrelGENE3D3.20.20.70coord: 1..135
e-value: 6.7E-31
score: 109.6
IPR001269tRNA-dihydrouridine synthasePFAMPF01207Duscoord: 3..160
e-value: 1.8E-21
score: 76.6
NoneNo IPR availablePANTHERPTHR42907:SF1FMN-LINKED OXIDOREDUCTASES SUPERFAMILY PROTEINcoord: 2..243
NoneNo IPR availableSUPERFAMILY51395FMN-linked oxidoreductasescoord: 2..206
IPR004653tRNA-dihydrouridine(20/20a) synthasePANTHERPTHR42907FAMILY NOT NAMEDcoord: 2..243

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig11977contigS-dermatodea_contig11977:197..4332 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig11977.1234.1mRNA_S-dermatodea_contig11977.1234.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig11977 164..5898 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig11977.1234.1 ID=prot_S-dermatodea_contig11977.1234.1|Name=mRNA_S-dermatodea_contig11977.1234.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=255bp
MIRKVTRTPITVKCRIGVDDKDSYEEFTAFVRAVKAAGVDHVIVHARKCL
LNGLSTSANRTVPPLRYDVVHRLALEFPELEIVLNGGVDNLEAVNDHLLG
RGEWGGYGGGVAGVMVGRAAYFDPWTFRHTDSAVFGSTNPGFTRREIMER
CVDTFNDYMQEGRLEGPERNKTRPQCLGTLLKPLGYLSSGARGSRKFRQE
LGRAVQADSKIDPDGEVFREVVEEAMNLMPDEILDEPVGDSAEEGASGLH
VLET*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013785Aldolase_TIM
IPR001269tRNA_hU_synthase
IPR004653DusA