mRNA_S-dermatodea_contig10163.121.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig10163.121.1
Unique NamemRNA_S-dermatodea_contig10163.121.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
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BLAST of mRNA_S-dermatodea_contig10163.121.1 vs. uniprot
Match: A0A6H5K458_9PHAE (MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K458_9PHAE)

HSP 1 Score: 304 bits (778), Expect = 6.520e-97
Identity = 161/252 (63.89%), Postives = 192/252 (76.19%), Query Frame = 1 
Query:  193 AHAMACASRGGTQQQNGRSFSRTET----NRRVSVKLPKREDYNTDDDDRWPTDKGLHPRRWSTEEDERLRTSVEKHHGTNWKDIAAEVKTRNHVQCLQRWKKVLTPGLVKGQWSREEDDLLTALVNEGHKNWGSLAARIPGRTSKQCRERWCHHLDPRIVKGEWTEEEDRTIVSMHEEMGNKWATIAQHLIGRTENATKIRWKILERNMKNGHDVHK-QDKRPRGASNR-HGTDARLRRLAAQAAASVLSR 930
            A +MACAS+   +        R  T    +R+ + + P+ ED           D+G HPRRWS EEDERLR +VE++HGT+WK+IAAEVKTRNHVQCLQRWKKVLTPGLVKGQW+ EED LL ++VNEGHKNWGSL+AR+PGRTSKQCRERWCHHLDPRIVKG WTEEED+ IVS+ ++MGNKWA IAQHL GRTENATKIRWKILER MK   ++H+ ++   RGAS+R    DARLR L +QAA S LS+
Sbjct:   20 AASMACASQTAARTPGKPQAKRARTASYQSRKHTSESPRIEDQ----------DQGPHPRRWSPEEDERLRAAVERYHGTSWKEIAAEVKTRNHVQCLQRWKKVLTPGLVKGQWTPEEDKLLVSIVNEGHKNWGSLSARVPGRTSKQCRERWCHHLDPRIVKGGWTEEEDQIIVSLQQQMGNKWAKIAQHLDGRTENATKIRWKILERGMKKEEEMHEDKETSSRGASSRPKRPDARLRCLDSQAATSALSK 261
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BLAST of mRNA_S-dermatodea_contig10163.121.1 vs. uniprot
Match: D7FQG8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQG8_ECTSI)

HSP 1 Score: 307 bits (787), Expect = 1.010e-94
Identity = 153/207 (73.91%), Postives = 174/207 (84.06%), Query Frame = 1 
Query:  352 HPRRWSTEEDERLRTSVEKHHGTNWKDIAAEVKTRNHVQCLQRWKKVLTPGLVKGQWSREEDDLLTALVNEGHKNWGSLAARIPGRTSKQCRERWCHHLDPRIVKGEWTEEEDRTIVSMHEEMGNKWATIAQHLIGRTENATKIRWKILERNMKNGHDVHK-QDKRPRGASNR-HGTDARLRRLAAQAAASVLSRASEVVHPVGVPE 966
            HPRRWS EEDERLR +VE++HGTNWK+IAAEVKTRNHVQCLQRWKKVLTPGLVKGQW+ EED LL ++VNEGHKNWGSL+ARIPGRTSKQCRERWCHHLDPRIVKG WTE ED+ I+ + ++MGNKWA IAQHL GRTENATKIRWKILER MK   + H+ ++   RGAS+R    DARLR LAAQAA S LS+    + PVGVP+
Sbjct:   16 HPRRWSLEEDERLRAAVERYHGTNWKEIAAEVKTRNHVQCLQRWKKVLTPGLVKGQWTPEEDQLLVSIVNEGHKNWGSLSARIPGRTSKQCRERWCHHLDPRIVKGGWTEAEDQMIILLQQQMGNKWAQIAQHLDGRTENATKIRWKILEREMKKEEERHEDKETSSRGASSRPKRPDARLRCLAAQAATSALSKTQSSLGPVGVPK 222
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BLAST of mRNA_S-dermatodea_contig10163.121.1 vs. uniprot
Match: A0A7S2UU49_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UU49_9STRA)

HSP 1 Score: 226 bits (575), Expect = 3.700e-68
Identity = 115/193 (59.59%), Postives = 141/193 (73.06%), Query Frame = 1 
Query:  355 PRRWSTEEDERLRTSVEKHHGTNWKDIAAEVKTRNHVQCLQRWKKVLTPGLVKGQWSREEDDLLTALVNEGHKNWGSLAARIPGRTSKQCRERWCHHLDPRIVKGEWTEEEDRTIVSMHEEMGNKWATIAQHLIGRTENATKIRWKILERNMKNGHDVHKQDKRPRGASNRHGTDARLRRLAAQAAASVLSRA 933
            PR+W+  EDE LR +V K+  +NWKDIA EV TRNHVQCLQRWKKVL PGLVKGQWS  ED  L  LV +G KNWG LAA++PGRTSKQCRERW HHLDP + KGE+T EED TI+ +  E+GNKW+ IA+HL GRTENA KIRWK L+R  +N      Q +      +R+  D+ L+ LAAQAA + +++A
Sbjct:   27 PRKWTLVEDEELRHAVRKYGESNWKDIAREVGTRNHVQCLQRWKKVLKPGLVKGQWSALEDAKLVDLVGKGFKNWGQLAAQMPGRTSKQCRERWSHHLDPSVKKGEYTTEEDNTILRLQSELGNKWSEIAKHLPGRTENAVKIRWKALDRLRQNAGSGRGQAQ----IRSRNHPDSHLKVLAAQAAVAAIAKA 215
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BLAST of mRNA_S-dermatodea_contig10163.121.1 vs. uniprot
Match: H3G911_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G911_PHYRM)

HSP 1 Score: 203 bits (516), Expect = 8.640e-62
Identity = 95/148 (64.19%), Postives = 111/148 (75.00%), Query Frame = 1 
Query:  355 PRRWSTEEDERLRTSVEKHHGTNWKDIAAEVKTRNHVQCLQRWKKVLTPGLVKGQWSREEDDLLTALVNEGHKNWGSLAARIPGRTSKQCRERWCHHLDPRIVKGEWTEEEDRTIVSMHEEMGNKWATIAQHLIGRTENATKIRWKIL 798
            P+RW+ EEDE+LR +V +H   NWK IA EV  RNH QCLQRW KVL PGLVKG W  +EDDLL  LV EG KNWG +A RIPGRTSKQCRERW +HLDP IV+GE++ EEDR I+     +GN+W+ IA  L GRTE+A KIRWK L
Sbjct:    9 PKRWTPEEDEKLREAVNRHGERNWKSIAEEVPGRNHTQCLQRWTKVLAPGLVKGHWRPDEDDLLKELVAEGRKNWGQVATRIPGRTSKQCRERWYNHLDPSIVRGEYSAEEDRMILDAQARLGNRWSAIAAMLPGRTEDAVKIRWKSL 156
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BLAST of mRNA_S-dermatodea_contig10163.121.1 vs. uniprot
Match: D0NJN5_PHYIT (Myb-like DNA-binding protein, putative n=2 Tax=Phytophthora TaxID=4783 RepID=D0NJN5_PHYIT)

HSP 1 Score: 202 bits (515), Expect = 1.290e-60
Identity = 97/158 (61.39%), Postives = 115/158 (72.78%), Query Frame = 1 
Query:  355 PRRWSTEEDERLRTSVEKHHGTNWKDIAAEVKTRNHVQCLQRWKKVLTPGLVKGQWSREEDDLLTALVNEGHKNWGSLAARIPGRTSKQCRERWCHHLDPRIVKGEWTEEEDRTIVSMHEEMGNKWATIAQHLIGRTENATKIRWKILERNMKNGHDV 828
            P+RW+ EED++LR +V +H   NWK IA EV  RNH QCLQRW KVL PGLVKG W  EEDDLL  LV EG KNWG +A RIPGRTSKQCRERW +HLDP I++GE++ EEDR I+     +GN+W+ IA  L GRTE+A KIRWK L R  K   D+
Sbjct:   82 PKRWTPEEDDKLREAVGRHGERNWKSIAEEVPGRNHTQCLQRWTKVLAPGLVKGHWRPEEDDLLKELVAEGRKNWGQVATRIPGRTSKQCRERWYNHLDPSIIRGEYSPEEDRMILDAQARLGNRWSAIAAMLPGRTEDAVKIRWKSLCRVRKGCVDI 239
[Close]
BLAST of mRNA_S-dermatodea_contig10163.121.1 vs. uniprot
Match: A0A2P4Y3D9_9STRA (Myb-like DNA-binding protein (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y3D9_9STRA)

HSP 1 Score: 202 bits (514), Expect = 2.080e-59
Identity = 94/148 (63.51%), Postives = 112/148 (75.68%), Query Frame = 1 
Query:  355 PRRWSTEEDERLRTSVEKHHGTNWKDIAAEVKTRNHVQCLQRWKKVLTPGLVKGQWSREEDDLLTALVNEGHKNWGSLAARIPGRTSKQCRERWCHHLDPRIVKGEWTEEEDRTIVSMHEEMGNKWATIAQHLIGRTENATKIRWKIL 798
            P+RW+ EED++LR +V +H   NWK IA EV  RNH QCLQRW KVL PGLVKG W  +ED+LL  LV EG KNWG +A RIPGRTSKQCRERW +HLDP IV+GE+T+EEDR I+     +GN+W+ IA  L GRTE+A KIRWK L
Sbjct:   91 PKRWTQEEDDKLREAVGRHGERNWKSIAEEVPGRNHTQCLQRWTKVLAPGLVKGHWRPDEDELLKELVAEGRKNWGQVATRIPGRTSKQCRERWYNHLDPSIVRGEYTQEEDRMILDAQARLGNRWSAIAAMLPGRTEDAVKIRWKSL 238
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BLAST of mRNA_S-dermatodea_contig10163.121.1 vs. uniprot
Match: A0A3M6VKU0_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VKU0_9STRA)

HSP 1 Score: 197 bits (501), Expect = 2.230e-58
Identity = 91/148 (61.49%), Postives = 110/148 (74.32%), Query Frame = 1 
Query:  355 PRRWSTEEDERLRTSVEKHHGTNWKDIAAEVKTRNHVQCLQRWKKVLTPGLVKGQWSREEDDLLTALVNEGHKNWGSLAARIPGRTSKQCRERWCHHLDPRIVKGEWTEEEDRTIVSMHEEMGNKWATIAQHLIGRTENATKIRWKIL 798
            P+RW+  EDE+LR +V +H   NWK IA EV  RNH QCLQRW KVL PGLVKG W  +ED+LL  LV EG KNWG +A RIPGRTSKQCRERW +HLDP I++GE+++ EDR I+     +GN+W+ IA  L GRTE+A KIRWK L
Sbjct:   99 PKRWTPTEDEKLRDAVGRHGERNWKSIAEEVPGRNHTQCLQRWTKVLAPGLVKGHWRPDEDELLKELVAEGRKNWGQVATRIPGRTSKQCRERWYNHLDPSIIRGEYSQAEDRMILDAQSRLGNRWSAIAAMLPGRTEDAVKIRWKSL 246
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BLAST of mRNA_S-dermatodea_contig10163.121.1 vs. uniprot
Match: W4GZ24_9STRA (Uncharacterized protein n=12 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GZ24_9STRA)

HSP 1 Score: 206 bits (525), Expect = 6.290e-58
Identity = 98/157 (62.42%), Postives = 115/157 (73.25%), Query Frame = 1 
Query:  355 PRRWSTEEDERLRTSVEKHHGTNWKDIAAEVKTRNHVQCLQRWKKVLTPGLVKGQWSREEDDLLTALVNEGHKNWGSLAARIPGRTSKQCRERWCHHLDPRIVKGEWTEEEDRTIVSMHEEMGNKWATIAQHLIGRTENATKIRWKILERNMKNGHD 825
            PRRWS  EDE LR +VE+    NWK IA +V  RNH QCLQRW KVL PGL+KG W+ EED  L ALV EG KNWG +A +IPGRTSKQCRERWC+HLDP I KG +T EED+ IV M  ++GN+W+ IAQ L GRTE+A KIRWK L R  ++  D
Sbjct:  109 PRRWSKAEDESLRVAVERSGERNWKAIADQVVGRNHTQCLQRWTKVLKPGLIKGHWTPEEDAKLRALVAEGRKNWGQVAGQIPGRTSKQCRERWCNHLDPNINKGNYTREEDQVIVDMQAKLGNRWSVIAQQLTGRTEDAVKIRWKSLMRTRRSSRD 265
[Close]
BLAST of mRNA_S-dermatodea_contig10163.121.1 vs. uniprot
Match: D8LSJ8_ECTSI (Myb-like DNA-binding protein, putative n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSJ8_ECTSI)

HSP 1 Score: 208 bits (529), Expect = 1.040e-57
Identity = 97/153 (63.40%), Postives = 115/153 (75.16%), Query Frame = 1 
Query:  355 PRRWSTEEDERLRTSVEKHHGTNWKDIAAEVKTRNHVQCLQRWKKVLTPGLVKGQWSREEDDLLTALVNEGHKNWGSLAARIPGRTSKQCRERWCHHLDPRIVKGEWTEEEDRTIVSMHEEMGNKWATIAQHLIGRTENATKIRWKILERNMK 813
            P +WS EED RLR +V +     WKDIA+ V+TRNHVQCLQRWKKVL PGLVKGQWS EEDD L  LV +G +NWG +A+ + GRTSKQCRERWCHHLDP + KG +T EED  I+ +  E+GN+WA IA+ L GRTENA KIRWK L R  +
Sbjct:  100 PVKWSAEEDRRLRDAVVRFSEARWKDIASLVETRNHVQCLQRWKKVLKPGLVKGQWSAEEDDRLVGLVEKGFRNWGQVASFMDGRTSKQCRERWCHHLDPAVRKGGYTTEEDELIIFLQGEVGNRWADIAKRLTGRTENAVKIRWKALNRRQR 252
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BLAST of mRNA_S-dermatodea_contig10163.121.1 vs. uniprot
Match: A0A484EJK3_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EJK3_BRELC)

HSP 1 Score: 208 bits (529), Expect = 1.140e-57
Identity = 100/156 (64.10%), Postives = 117/156 (75.00%), Query Frame = 1 
Query:  355 PRRWSTEEDERLRTSVEKHHGTNWKDIAAEVKTRNHVQCLQRWKKVLTPGLVKGQWSREEDDLLTALVNEGHKNWGSLAARIPGRTSKQCRERWCHHLDPRIVKGEWTEEEDRTIVSMHEEMGNKWATIAQHLIGRTENATKIRWKILERNMKNGH 822
            P+RW+ EEDE+LR +V +H   NWK IA EV  RNH QCLQRW KVL PGLVKG W  EEDDLL  LV EG KNWG +A RIPGRTSKQCRERW +HLDP I++GE+T EEDR I+S    +GN+W+ IA  L GRTE+A KIRWK L R ++ GH
Sbjct:  109 PKRWTPEEDEKLREAVGRHGERNWKSIAEEVPRRNHTQCLQRWTKVLAPGLVKGHWRPEEDDLLKELVAEGRKNWGQVATRIPGRTSKQCRERWYNHLDPSIIRGEYTPEEDRMILSAQSRLGNRWSAIAAMLPGRTEDAVKIRWKSLCR-VRKGH 263
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10163.121.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K458_9PHAE6.520e-9763.89MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
D7FQG8_ECTSI1.010e-9473.91Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2UU49_9STRA3.700e-6859.59Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
H3G911_PHYRM8.640e-6264.19Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
D0NJN5_PHYIT1.290e-6061.39Myb-like DNA-binding protein, putative n=2 Tax=Phy... [more]
A0A2P4Y3D9_9STRA2.080e-5963.51Myb-like DNA-binding protein (Fragment) n=1 Tax=Ph... [more]
A0A3M6VKU0_9STRA2.230e-5861.49Uncharacterized protein n=2 Tax=Peronospora effusa... [more]
W4GZ24_9STRA6.290e-5862.42Uncharacterized protein n=12 Tax=Aphanomyces astac... [more]
D8LSJ8_ECTSI1.040e-5763.40Myb-like DNA-binding protein, putative n=2 Tax=Ect... [more]
A0A484EJK3_BRELC1.140e-5764.10Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig10163contigS-dermatodea_contig10163:3288..7587 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score310.8
Seed ortholog evalue7.2e-82
Seed eggNOG ortholog2880.D7FQG8
EggNOG free text desc.RNA polymerase II transcription regulator recruiting activity
EggNOG OGsCOG5147@1,KOG0048@2759
COG Functional cat.ADK
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionSANT/Myb domain transcription factor
Ec32 orthologEc-22_002960.1
Exons8
Model size967
Cds size966
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig10163.121.1prot_S-dermatodea_contig10163.121.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig10163 3288..7587 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924142.7303832-CDS-S-dermatodea_contig10163:3287..34791622924142.7303832-CDS-S-dermatodea_contig10163:3287..3479Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10163 3288..3479 +
1694079046.798554-CDS-S-dermatodea_contig10163:3287..34791694079046.798554-CDS-S-dermatodea_contig10163:3287..3479Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10163 3288..3479 +
1622924142.7388623-CDS-S-dermatodea_contig10163:4004..40521622924142.7388623-CDS-S-dermatodea_contig10163:4004..4052Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10163 4005..4052 +
1694079046.8086097-CDS-S-dermatodea_contig10163:4004..40521694079046.8086097-CDS-S-dermatodea_contig10163:4004..4052Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10163 4005..4052 +
1622924142.7492065-CDS-S-dermatodea_contig10163:4808..49151622924142.7492065-CDS-S-dermatodea_contig10163:4808..4915Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10163 4809..4915 +
1694079046.81598-CDS-S-dermatodea_contig10163:4808..49151694079046.81598-CDS-S-dermatodea_contig10163:4808..4915Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10163 4809..4915 +
1622924142.7620559-CDS-S-dermatodea_contig10163:5236..53061622924142.7620559-CDS-S-dermatodea_contig10163:5236..5306Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10163 5237..5306 +
1694079046.8236864-CDS-S-dermatodea_contig10163:5236..53061694079046.8236864-CDS-S-dermatodea_contig10163:5236..5306Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10163 5237..5306 +
1622924142.7712128-CDS-S-dermatodea_contig10163:5625..57051622924142.7712128-CDS-S-dermatodea_contig10163:5625..5705Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10163 5626..5705 +
1694079046.831549-CDS-S-dermatodea_contig10163:5625..57051694079046.831549-CDS-S-dermatodea_contig10163:5625..5705Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10163 5626..5705 +
1622924142.7810688-CDS-S-dermatodea_contig10163:6212..64621622924142.7810688-CDS-S-dermatodea_contig10163:6212..6462Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10163 6213..6462 +
1694079046.8394122-CDS-S-dermatodea_contig10163:6212..64621694079046.8394122-CDS-S-dermatodea_contig10163:6212..6462Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10163 6213..6462 +
1622924142.7910569-CDS-S-dermatodea_contig10163:6903..69991622924142.7910569-CDS-S-dermatodea_contig10163:6903..6999Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10163 6904..6999 +
1694079046.8614585-CDS-S-dermatodea_contig10163:6903..69991694079046.8614585-CDS-S-dermatodea_contig10163:6903..6999Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10163 6904..6999 +
1622924142.8041167-CDS-S-dermatodea_contig10163:7464..75871622924142.8041167-CDS-S-dermatodea_contig10163:7464..7587Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10163 7465..7587 +
1694079046.8714337-CDS-S-dermatodea_contig10163:7464..75871694079046.8714337-CDS-S-dermatodea_contig10163:7464..7587Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10163 7465..7587 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig10163.121.1

>prot_S-dermatodea_contig10163.121.1 ID=prot_S-dermatodea_contig10163.121.1|Name=mRNA_S-dermatodea_contig10163.121.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=322bp
VTKQIFQKPPHPVTDNLNVTHLLPNDHLPTTASSTPSNRTLWPSSCLLSP
KALLGYEFCNTHTLAHAMACASRGGTQQQNGRSFSRTETNRRVSVKLPKR
EDYNTDDDDRWPTDKGLHPRRWSTEEDERLRTSVEKHHGTNWKDIAAEVK
TRNHVQCLQRWKKVLTPGLVKGQWSREEDDLLTALVNEGHKNWGSLAARI
PGRTSKQCRERWCHHLDPRIVKGEWTEEEDRTIVSMHEEMGNKWATIAQH
LIGRTENATKIRWKILERNMKNGHDVHKQDKRPRGASNRHGTDARLRRLA
AQAAASVLSRASEVVHPVGVPE
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mRNA from alignment at S-dermatodea_contig10163:3288..7587+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig10163.121.1 ID=mRNA_S-dermatodea_contig10163.121.1|Name=mRNA_S-dermatodea_contig10163.121.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=4300bp|location=Sequence derived from alignment at S-dermatodea_contig10163:3288..7587+ (Saccorhiza dermatodea SderLu1190fm monoicous)
GTAACAAAACAAATCTTCCAGAAGCCACCCCACCCAGTCACCGACAACCT
CAACGTGACACACCTTCTGCCTAACGACCACCTGCCGACCACCGCCTCCA
GCACTCCCTCAAACAGGACGCTGTGGCCCAGCAGCTGCCTTCTCTCGCCC
AAGGCATTACTGGGGTACGAATTCTGCAACACACACACACTGGTGCGGCG
TTGGAGTAGTTGCAATTTGAAAACGTCTACTGTCAATAGCTGCGCGTGTC
CTTTGCTGTTTGTTTGACGTGATTTTGGAGGAAATCGACAGCATGGGACA
GATAATACTCAGTTGTAACATAAGTAGGATGTGTGTGGAGCAAGGTAAAG
GAGGGCTGGTTATCAAAACAGCGCATTCGTTTAGGCATCGAGGGTTATTG
TTCGTCGGAGGTTCTCTCACGCCTCCACATGTTGCCGGCAAAAATAGTAT
GCTCCGACAATGCACACGCTTGGAAGCCTATCCTTTCGCGGCAGTCGTTG
GACAGCGGAGCAAGCAGCTCGTTTTTGCTCCACCCAGCAGCCCTCCTCTC
GATCTGGACCGCCGTAGCTGCCGCGATTGCACGAATCCTCCTCCATAGAT
AGAATGAGTCACCGGGCGCATGTTGCCTCTCGCCTACCATGAGCATGCAT
TTCCATCTCACGAGCTTTTTCTGTTCTCCTTGGTGTGCCGGTTCGTTCGG
CCCACGCTGCGTTGAAGGCTCACGCCATGGCCTGTGCTTCGCGGGGAGGG
ACGCAGCAGCAAAATGTGAGCTTGACATGGGCAGTGCCAGAGTGCTCTTC
TTGTTCTTGGATTACAGTCAGTATAATAGTACTCAACTGCAGCATTTGAT
TTAGCATTTATTTATTTATGATACTAATATATAGATATATTCGAGGTCGA
CTACCCTTTTCGCCACATATGATGTAGCCTTGACAATCGACGCAAACCGT
TTTTCCCCCGCACCTCAAGGGTTGCCGCCGCACCCTCGTGTTGCGCAGTT
CATAGAAATGGCCTTGGCGGTGACTCCTTCCGTTGATCATGCCCCCCTTT
AAATACAACGCGCGTATCATATGTTAGCAGTGCGATCGCGATGGCCGCGG
AAGTTTCATGGCATCTCCGTTGTCGGCCAAATTGGAAACGCCGAAGTGTT
TCGAGTTGCACTTATTTTTGCACAGCAGCCTCTCCCAAATCCCAAACTCC
CTTCTTACTATACTATAATACCGGTACCAAATACTGTGTCAACAGCTCCA
CCATGCCGGCGACTCCTCGCTCCGCCTACCCTGCGCCCAAATGGTGCAAG
GCAGGCCCCAGATGTGCGGACATTCACGAAAGATCCACCTCAGCGAGGCA
ATCTCTATTTCGAAAGGTTCGGCGATATTTGATATTTTGGCCGTCGGCGC
TAAATTAGCTTCGTTTTTAGAGGCCCGCTCCCACGTATTTTCCCCCAGTC
CCTTTACAACAGCCTCACTCGCTGGCTCTGCTTGGTGACGCCACAACCTT
GCATGCCGCGGTGCTCAACAGGGAAGGTCGTTCAGCAGAACGGAGACCAA
CCGGAGGGTGTCGGTGAAGCTGCCGAAGAGGGAGGACTACAACACAGATG
ATGACGACAGGTGGCCTACAGACAAGGGGTCAGTTGCCAGACTTCTTATA
GAAAAGCATCATATCACGTGTGATTAAAACCTGCCTGTCTGTCGTGTTGA
CGAACAAATAACGCGCTCTTTTTGTTCGCGGGGAGAGCGCCGCGCTTTTC
GCGCAAGTGTGTACAAGTCAAGTATATAGCACGTCGTTGGCGAAGTCAGC
GTTACTGATTGGTCCTGTTGTCGTCTGTGTTCGTGTACAAGTCTGGTGCA
CTTCGTCCACCGAGTTGTTTGCCCTCGGGCCATGCCCCTTCGAGCTGATA
GTGGGGTATTAAATATTCGCACCCCCGCGGCGTGTTTGCTGGTGGGCAGG
TTGCATCCCCGCAGGTGGTCCACTGAGGAGGACGAACGCCTTCGTACATC
TGTCGAGAAGCATCACGGGGTGAGACCGATTCGCCCCCCGCCTTCTGACT
TACTTCAAGCGCGATACTGGCCCATGTGTTATGGGGCGATGTTGGCCCAC
TGTTTGCTTTACTGCCGTGGTCGGCCCTTGTGCCGTGCTACAAGTGGAGT
ATTTATTCCTTGTCTGCTGGCAAATGGATGTCATGGCCCTGCATAAAATG
ACAACAGCAGGACCCGTGGCCAGGTGTTTTCTTGTTTTCCTTAAGTAGAT
TCCTTCGCGGTTCACCGCCGTGCATAACTCACTGTGTCTCCCCTCCCCCC
CCCCCGCCCCCCCATTACAAAAAAAAACAATGTGTCAGACAAACTGGAAG
GACATAGCTGCGGAGGTCAAAACGAGGAATCACGTCCAGTGCCTTCAGCG
GTGGAAGAAGGTGCTAACGTGAGCCAGGATAAGTCAGCGCGCGTGTGTAC
AGCAGTCCGAGTTAAATGAGTGATCGATCGCAACGGGTAATGCACACGGG
GCGCACGTGCGCGGGGACATGCATACCAACCATATTGACAGCCGTCAGAC
GTGTACACGTAGCGCCGTTCGCACCTCTATGCACTATTAATACTGTAATG
CCTTACGCCACCGACCACGGCCGTGGTGGACCCGAGACCGGCCCATCGGC
TCGCACGTTATAATTTGGCAGTGATGTATGTAAGAGATAGAAAGAAGCGT
TACCGACAGGTTTGGCGGGGATGCACCTCTGCCAACTGTTGCCCGCGCCG
CACCCACTCGCGGCCGTGAAGGGGGCGCAACTGCGAGATCGGTTCCAGGC
AGCGGAGTAAAAGGATAGCGCCCAGGCCTTCCGACAAAAGCCGTTGCCAC
CAACTCCTTGCCGTCTTTCGTTTACACTTACCACTTCCGCGCTTGTGGAA
CACTTAATTTGATTAAATCGTGCAGCCCGGGACTGGTGAAGGGGCAGTGG
TCCCGCGAGGAGGACGACCTTCTGACCGCTCTCGTTAACGAAGGCCACAA
AAACTGGGGGAGTCTTGCCGCGCGCATTCCGGGGAGAACTTCGAAGCAGT
GCCGGGAGCGGTGGTGCCATCACCTCGACCCGCGAATCGTTAAGGGCGAG
TGGACGGAGGAGGAGGATCGAACCATAGTGTCTATGCACGAGGAGATGGG
GAACAAGTGGGCTACAATCGCGCAGGTGGGATCCCCGAGACCCGAAAGAG
CACCGCTGTGGGGGGGGGGGAAGGTATAGCGAAAAAAAACTGGCGACTGG
AGGGTGATGCGGGGCTGGTCAACCAACCAGCCTGTGCCTACGTGTAAAAG
GACCTTGGTCGGTCTACCACTTTTTTTTTTTTTTCGCGCGCAGGGAATGT
CTTCTGTTGAGCTGGTGAAGGTATGATCTGAGGAGTTGATACTCGTAGGT
GTATGAGACCGGAGGGCTGTTCCACTGAAGGGCATATCATTATTAATTAT
TATCGAATCGCTCCCGTCCCCGCTGCGAATTTTGATGTTTTCGACACGGC
GCGTTGTGAATTTTTGGTGAAACGCGATTCCGACCAGAAGGCTGATGGCC
CCTGCCCCCGTGAAATCCGGTGTTGCTTTTCTTGTGGAACACTTTTGTGC
CTGTCGACGCCACTAGCACCTCATTGGACGCACGGAAAACGCCACGAAGA
TCCGCTGGAAAATCCTCGAGCGGAATATGAAGAACGGCCACGACGTCCAC
AAACAGGACAAGGTGTGAAACCAAACCGCGATGACATCTCCTTGCTTTTG
CTAAAGGCCGGGTCGCCGAACGTCCCCGTAGCTCACCAACCTCTGGGTCA
GTGCATCGGCAGGCGTGACGGGTTGCTGACAGGTGCCGCTGCCAATAAAG
TATTGTTGTCGTCAGCGTCGTATTATACTATATTAATTGTGGTTGTGCGC
GAGAAGACGATATCGATGGCGCCCCCGTACGCCAGACTCGCGCGGTGCCC
GGGGTTTAATCTGGTCGGTGGTGGTAGTGGTGGTGGTGGTGGCAGCGGCG
ACGGCGACGGTGATAGTGTTGGTGCCCTGCAGAGGACAACAGCCGTACTG
AATGAGCGGCAGGAAATATATTTTGGCACGGTAAAAACACCCTGAGGGTT
GATTCAGAACGCCCGACAGGCTCACTCGCATGCGCGCCTGCCTCCGCCTC
CTCGCTCCGCCTGTCGTAAACCTGCAGCGTCCAAGAGGCGCCTCGAACCG
GCACGGTACCGATGCACGCTTGCGTCGTCTCGCTGCCCAAGCGGCCGCGT
CCGTGCTGTCGAGGGCGAGCGAAGTCGTCCACCCGGTCGGCGTTCCCGAG
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Coding sequence (CDS) from alignment at S-dermatodea_contig10163:3288..7587+

>mRNA_S-dermatodea_contig10163.121.1 ID=mRNA_S-dermatodea_contig10163.121.1|Name=mRNA_S-dermatodea_contig10163.121.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1932bp|location=Sequence derived from alignment at S-dermatodea_contig10163:3288..7587+ (Saccorhiza dermatodea SderLu1190fm monoicous)
GTAACAAAACAAATCTTCCAGAAGCCACCCCACCCAGTCACCGACAACCT
CAACGTGACACACCTTCTGCCTAACGACCACCTGCCGACCACCGCCTCCA
GCACTCCCTCAAACAGGACGCTGTGGCCCAGCAGCTGCCTTCTCTCGCCC
AAGGCATTACTGGGGTACGAATTCTGCAACACACACACACTGGTAACAAA
ACAAATCTTCCAGAAGCCACCCCACCCAGTCACCGACAACCTCAACGTGA
CACACCTTCTGCCTAACGACCACCTGCCGACCACCGCCTCCAGCACTCCC
TCAAACAGGACGCTGTGGCCCAGCAGCTGCCTTCTCTCGCCCAAGGCATT
ACTGGGGTACGAATTCTGCAACACACACACACTGGCTCACGCCATGGCCT
GTGCTTCGCGGGGAGGGACGCAGCAGCAAAATGCTCACGCCATGGCCTGT
GCTTCGCGGGGAGGGACGCAGCAGCAAAATGGAAGGTCGTTCAGCAGAAC
GGAGACCAACCGGAGGGTGTCGGTGAAGCTGCCGAAGAGGGAGGACTACA
ACACAGATGATGACGACAGGTGGCCTACAGACAAGGGGGAAGGTCGTTCA
GCAGAACGGAGACCAACCGGAGGGTGTCGGTGAAGCTGCCGAAGAGGGAG
GACTACAACACAGATGATGACGACAGGTGGCCTACAGACAAGGGGTTGCA
TCCCCGCAGGTGGTCCACTGAGGAGGACGAACGCCTTCGTACATCTGTCG
AGAAGCATCACGGGGTTGCATCCCCGCAGGTGGTCCACTGAGGAGGACGA
ACGCCTTCGTACATCTGTCGAGAAGCATCACGGGACAAACTGGAAGGACA
TAGCTGCGGAGGTCAAAACGAGGAATCACGTCCAGTGCCTTCAGCGGTGG
AAGAAGGTGCTAACACAAACTGGAAGGACATAGCTGCGGAGGTCAAAACG
AGGAATCACGTCCAGTGCCTTCAGCGGTGGAAGAAGGTGCTAACCCCGGG
ACTGGTGAAGGGGCAGTGGTCCCGCGAGGAGGACGACCTTCTGACCGCTC
TCGTTAACGAAGGCCACAAAAACTGGGGGAGTCTTGCCGCGCGCATTCCG
GGGAGAACTTCGAAGCAGTGCCGGGAGCGGTGGTGCCATCACCTCGACCC
GCGAATCGTTAAGGGCGAGTGGACGGAGGAGGAGGATCGAACCATAGTGT
CTATGCACGAGGAGATGGGGAACAAGTGGGCTACAATCGCGCAGCCCGGG
ACTGGTGAAGGGGCAGTGGTCCCGCGAGGAGGACGACCTTCTGACCGCTC
TCGTTAACGAAGGCCACAAAAACTGGGGGAGTCTTGCCGCGCGCATTCCG
GGGAGAACTTCGAAGCAGTGCCGGGAGCGGTGGTGCCATCACCTCGACCC
GCGAATCGTTAAGGGCGAGTGGACGGAGGAGGAGGATCGAACCATAGTGT
CTATGCACGAGGAGATGGGGAACAAGTGGGCTACAATCGCGCAGCACCTC
ATTGGACGCACGGAAAACGCCACGAAGATCCGCTGGAAAATCCTCGAGCG
GAATATGAAGAACGGCCACGACGTCCACAAACAGGACAAGCACCTCATTG
GACGCACGGAAAACGCCACGAAGATCCGCTGGAAAATCCTCGAGCGGAAT
ATGAAGAACGGCCACGACGTCCACAAACAGGACAAGCGTCCAAGAGGCGC
CTCGAACCGGCACGGTACCGATGCACGCTTGCGTCGTCTCGCTGCCCAAG
CGGCCGCGTCCGTGCTGTCGAGGGCGAGCGAAGTCGTCCACCCGGTCGGC
GTTCCCGAGCGTCCAAGAGGCGCCTCGAACCGGCACGGTACCGATGCACG
CTTGCGTCGTCTCGCTGCCCAAGCGGCCGCGTCCGTGCTGTCGAGGGCGA
GCGAAGTCGTCCACCCGGTCGGCGTTCCCGAG
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