mRNA_S-dermatodea_contig11907.1199.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig11907.1199.1 vs. uniprot
Match: A0A6H5KVQ9_9PHAE (MPN domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KVQ9_9PHAE) HSP 1 Score: 104 bits (259), Expect = 3.910e-25 Identity = 49/57 (85.96%), Postives = 54/57 (94.74%), Query Frame = 1
Query: 1 FGVKRRVVLPSTLVEEFDKIAKPNTDRPPDGIETCGILAGKLSHNVLEMTTLIIPKQ 171
FG +R+VVLPSTLV EF+KIAKPNTD+PP GIETCGILAGKL+HNVLEMTTLIIPKQ
Sbjct: 229 FGTERKVVLPSTLVAEFEKIAKPNTDKPPYGIETCGILAGKLTHNVLEMTTLIIPKQ 285
BLAST of mRNA_S-dermatodea_contig11907.1199.1 vs. uniprot
Match: A0A168R8D3_ABSGL (MPN domain-containing protein n=1 Tax=Absidia glauca TaxID=4829 RepID=A0A168R8D3_ABSGL) HSP 1 Score: 68.2 bits (165), Expect = 5.650e-12 Identity = 34/53 (64.15%), Postives = 43/53 (81.13%), Query Frame = 1
Query: 13 RRVVLPSTLVEEFDKIAKPNTDRPPDGIETCGILAGKLSHNVLEMTTLIIPKQ 171
RR+++PS+L + F IAKPNT+R IETCGILAG L +NVL++TTLIIPKQ
Sbjct: 298 RRLIVPSSLQDRFISIAKPNTNR---NIETCGILAGTLKNNVLQVTTLIIPKQ 347
BLAST of mRNA_S-dermatodea_contig11907.1199.1 vs. uniprot
Match: A0A7S3XHL2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XHL2_HETAK) HSP 1 Score: 67.8 bits (164), Expect = 5.900e-12 Identity = 32/54 (59.26%), Postives = 40/54 (74.07%), Query Frame = 1
Query: 10 KRRVVLPSTLVEEFDKIAKPNTDRPPDGIETCGILAGKLSHNVLEMTTLIIPKQ 171
KR ++LP +LV F ++A PNT PP G+ETCGILAGK+ LE+T LIIPKQ
Sbjct: 142 KRPLMLPDSLVAVFSEVAHPNTVTPPHGLETCGILAGKILEESLEVTHLIIPKQ 195
BLAST of mRNA_S-dermatodea_contig11907.1199.1 vs. uniprot
Match: A0A8K1CH24_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CH24_PYTOL) HSP 1 Score: 67.4 bits (163), Expect = 1.040e-11 Identity = 32/56 (57.14%), Postives = 41/56 (73.21%), Query Frame = 1
Query: 4 GVKRRVVLPSTLVEEFDKIAKPNTDRPPDGIETCGILAGKLSHNVLEMTTLIIPKQ 171
G R + +P++++ +F IA PNT+R PDGIETCGILAG L L +TTLIIPKQ
Sbjct: 257 GKNRTLEIPTSIIAQFTNIAAPNTNRYPDGIETCGILAGVLRGTRLVITTLIIPKQ 312
BLAST of mRNA_S-dermatodea_contig11907.1199.1 vs. uniprot
Match: A0A1W0A108_9STRA (Metalloprotease family M67C n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A108_9STRA) HSP 1 Score: 67.4 bits (163), Expect = 1.070e-11 Identity = 32/53 (60.38%), Postives = 42/53 (79.25%), Query Frame = 1
Query: 13 RRVVLPSTLVEEFDKIAKPNTDRPPDGIETCGILAGKLSHNVLEMTTLIIPKQ 171
R++ +P+ LV+EF +IA PNT + P GIETCGILAG L + +L +TTLIIPKQ
Sbjct: 246 RQLSIPTMLVQEFIRIADPNTRKHPYGIETCGILAGTLKNQLLTITTLIIPKQ 298
BLAST of mRNA_S-dermatodea_contig11907.1199.1 vs. uniprot
Match: A0A1V9Z2V7_9STRA (Metalloprotease family M67C n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z2V7_9STRA) HSP 1 Score: 66.2 bits (160), Expect = 2.690e-11 Identity = 31/53 (58.49%), Postives = 39/53 (73.58%), Query Frame = 1
Query: 13 RRVVLPSTLVEEFDKIAKPNTDRPPDGIETCGILAGKLSHNVLEMTTLIIPKQ 171
R + +P+ LV+EF +IA PNT +PP GIETCGIL G L L +TTL+IPKQ
Sbjct: 270 RELSIPAMLVQEFIRIADPNTRQPPYGIETCGILTGTLKDQKLAITTLVIPKQ 322
BLAST of mRNA_S-dermatodea_contig11907.1199.1 vs. uniprot
Match: W2H2I5_PHYPR (MPN domain-containing protein n=12 Tax=Phytophthora parasitica TaxID=4792 RepID=W2H2I5_PHYPR) HSP 1 Score: 65.1 bits (157), Expect = 5.390e-11 Identity = 32/56 (57.14%), Postives = 40/56 (71.43%), Query Frame = 1
Query: 4 GVKRRVVLPSTLVEEFDKIAKPNTDRPPDGIETCGILAGKLSHNVLEMTTLIIPKQ 171
G R + +PS ++ +F +A PNT+RPP GIETCGILAG L L +TTLIIPKQ
Sbjct: 154 GKIRTLEIPSGIIAQFTLLASPNTNRPPYGIETCGILAGILYDRKLIITTLIIPKQ 209
BLAST of mRNA_S-dermatodea_contig11907.1199.1 vs. uniprot
Match: W2H2M5_PHYPR (MPN domain-containing protein n=6 Tax=Phytophthora parasitica TaxID=4792 RepID=W2H2M5_PHYPR) HSP 1 Score: 65.1 bits (157), Expect = 5.870e-11 Identity = 32/56 (57.14%), Postives = 40/56 (71.43%), Query Frame = 1
Query: 4 GVKRRVVLPSTLVEEFDKIAKPNTDRPPDGIETCGILAGKLSHNVLEMTTLIIPKQ 171
G R + +PS ++ +F +A PNT+RPP GIETCGILAG L L +TTLIIPKQ
Sbjct: 154 GKIRTLEIPSGIIAQFTLLASPNTNRPPYGIETCGILAGILYDRKLIITTLIIPKQ 209
BLAST of mRNA_S-dermatodea_contig11907.1199.1 vs. uniprot
Match: W2JB24_PHYPR (MPN domain-containing protein n=20 Tax=Phytophthora parasitica TaxID=4792 RepID=W2JB24_PHYPR) HSP 1 Score: 65.1 bits (157), Expect = 6.650e-11 Identity = 32/56 (57.14%), Postives = 40/56 (71.43%), Query Frame = 1
Query: 4 GVKRRVVLPSTLVEEFDKIAKPNTDRPPDGIETCGILAGKLSHNVLEMTTLIIPKQ 171
G R + +PS ++ +F +A PNT+RPP GIETCGILAG L L +TTLIIPKQ
Sbjct: 235 GKIRTLEIPSGIIAQFTLLASPNTNRPPYGIETCGILAGILYDRKLIITTLIIPKQ 290
BLAST of mRNA_S-dermatodea_contig11907.1199.1 vs. uniprot
Match: W2H469_PHYPR (MPN domain-containing protein n=9 Tax=Phytophthora TaxID=4783 RepID=W2H469_PHYPR) HSP 1 Score: 65.1 bits (157), Expect = 6.790e-11 Identity = 32/56 (57.14%), Postives = 40/56 (71.43%), Query Frame = 1
Query: 4 GVKRRVVLPSTLVEEFDKIAKPNTDRPPDGIETCGILAGKLSHNVLEMTTLIIPKQ 171
G R + +PS ++ +F +A PNT+RPP GIETCGILAG L L +TTLIIPKQ
Sbjct: 242 GKIRTLEIPSGIIAQFTLLASPNTNRPPYGIETCGILAGILYDRKLIITTLIIPKQ 297 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11907.1199.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig11907.1199.1 >prot_S-dermatodea_contig11907.1199.1 ID=prot_S-dermatodea_contig11907.1199.1|Name=mRNA_S-dermatodea_contig11907.1199.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=57bp FGVKRRVVLPSTLVEEFDKIAKPNTDRPPDGIETCGILAGKLSHNVLEMTback to top mRNA from alignment at S-dermatodea_contig11907:92..4746+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig11907.1199.1 ID=mRNA_S-dermatodea_contig11907.1199.1|Name=mRNA_S-dermatodea_contig11907.1199.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=4655bp|location=Sequence derived from alignment at S-dermatodea_contig11907:92..4746+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig11907:92..4746+ >mRNA_S-dermatodea_contig11907.1199.1 ID=mRNA_S-dermatodea_contig11907.1199.1|Name=mRNA_S-dermatodea_contig11907.1199.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=342bp|location=Sequence derived from alignment at S-dermatodea_contig11907:92..4746+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |