prot_S-dermatodea_contig1189.1188.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig1189.1188.1
Unique Nameprot_S-dermatodea_contig1189.1188.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length452
Homology
BLAST of mRNA_S-dermatodea_contig1189.1188.1 vs. uniprot
Match: D8LAV3_ECTSI (Methylase-related n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAV3_ECTSI)

HSP 1 Score: 325 bits (832), Expect = 1.250e-103
Identity = 172/272 (63.24%), Postives = 204/272 (75.00%), Query Frame = 0
Query:  182 ARDAIDMAQAALGRRDSAAAELKQGVAATGMASAAXXXXXXXXXXXXXXXXXLSEEXXXXXQEE--EPTREPDSARTTRNNPAASHSHLSHLLWRQVAGPGDTVVDCTAGNGYDTLELAKIVALNDGQGKIYAMDVQDRALDATRARLDAELGQTAVKRVKLTKGNFRQLPAELGPMSVQLMVYNLGWLPGGDKSITTELEDTLESIEAAKRLMKSGGMISVMLYRGHAEGERETEAVLEYARGLTHYHWRVYVHERVNRPGSPVLLTIYRL 451
            A+DAI M QAAL RRDSA  EL            A                   +       EE  + T+EP+SAR +RNNPAASHSH++HLLWRQVAGPGDTV+DCTAGNG+D+LELAKIVAL DG G +Y MDVQ+RA++ATR RL +ELG+ A+KR  L  GNFR++PAEL P+SVQL+VYNLGWLPGGDKSITT+LEDTLESIEAAKR++K GGMISVMLYRGHAEG+RETEAV +YA GL H  WRV++HER+NR  SP LLTI++L
Sbjct:  191 AQDAIGMVQAALDRRDSATVEL-----------GAESSEDTPVAAETAVLTSRGDGSVSDGGEEGGDGTKEPESARWSRNNPAASHSHMAHLLWRQVAGPGDTVLDCTAGNGHDSLELAKIVALKDGVGSLYVMDVQERAIEATRERLRSELGELALKRSTLINGNFREMPAELEPLSVQLVVYNLGWLPGGDKSITTKLEDTLESIEAAKRVVKHGGMISVMLYRGHAEGKRETEAVRDYAAGLAHSQWRVFMHERINRADSPELLTIFKL 451          
BLAST of mRNA_S-dermatodea_contig1189.1188.1 vs. uniprot
Match: A0A6H5JPN0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPN0_9PHAE)

HSP 1 Score: 315 bits (808), Expect = 5.820e-100
Identity = 170/270 (62.96%), Postives = 201/270 (74.44%), Query Frame = 0
Query:  182 ARDAIDMAQAALGRRDSAAAELKQGVAATGMASAAXXXXXXXXXXXXXXXXXLSEEXXXXXQEEEPTREPDSARTTRNNPAASHSHLSHLLWRQVAGPGDTVVDCTAGNGYDTLELAKIVALNDGQGKIYAMDVQDRALDATRARLDAELGQTAVKRVKLTKGNFRQLPAELGPMSVQLMVYNLGWLPGGDKSITTELEDTLESIEAAKRLMKSGGMISVMLYRGHAEGERETEAVLEYARGLTHYHWRVYVHERVNRPGSPVLLTIYRL 451
            A+DAI M QAAL RRDSAA EL       G  S+                   S +          T+EP+SAR +RNNPAASHSH++HLLWRQVAGPGDTV+DCTAGNG+D+LELAKIVAL DG G +Y MD  +RA++ATR RL +ELG+ A+KR  L   NFR++PAEL P+SVQL+VYNLGWLPGGDKSITT LEDTLESIEAAKR++K GGMISVMLYRGHAEG+RETEAV +YA  L H  WRV++HER+NR GSP LLTI++L
Sbjct:  205 AQDAIGMVQAALDRRDSAAVEL-------GAKSSEDTQVAAEAAVLTSRGGEESGDG---------TKEPESARWSRNNPAASHSHMAHLLWRQVAGPGDTVLDCTAGNGHDSLELAKIVALKDGVGSLYIMD--ERAIEATRERLRSELGELALKRSTLINSNFREMPAELEPLSVQLVVYNLGWLPGGDKSITTTLEDTLESIEAAKRVVKHGGMISVMLYRGHAEGKRETEAVRDYAASLAHSQWRVFMHERINRAGSPELLTIFKL 456          
BLAST of mRNA_S-dermatodea_contig1189.1188.1 vs. uniprot
Match: A0A0G4GWR6_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4GWR6_VITBC)

HSP 1 Score: 172 bits (437), Expect = 5.920e-48
Identity = 88/197 (44.67%), Postives = 129/197 (65.48%), Query Frame = 0
Query:  259 NNPAASHSHLSHLLWRQVAGPGDTVVDCTAGNGYDTLELAKIVALNDG----QGKIYAMDVQDRALDATRARLDAELGQTAVKRVKLTKGNFRQLPAELGPMSVQLMVYNLGWLPGGDKSITTELEDTLESIEAAKRLMKSGGMISVMLYRGHAEGERETEAVLEYARGLTHYHWRVYVHERVNRPGSPVLLTIYRL 451
            ++P ASH  LS LLW+Q   PG   VD T GNG D+L L+ ++  +DG    + ++  +DVQ  A+ +TR+ L  EL    ++R++L   +  + P  +   SV ++VYNLG+LPGGDKS+TT  + T+ S+ AA +L+  GG+ISVMLYRGH EG  E++ V+ +A  L    WRV++HE +NRP SP L+T+YRL
Sbjct:    9 SSPLASHLPLSRLLWKQGLKPGGRAVDATCGNGKDSLFLSTLIFPSDGDDETEAELICIDVQREAIGSTRSLLAEELRPPHLERIRLFHQSHERFPDCIADNSVDVIVYNLGYLPGGDKSVTTRHDTTITSLTAALKLIVKGGLISVMLYRGHPEGTVESDGVISWASQLPADEWRVFLHEPLNRPTSPALMTLYRL 205          
BLAST of mRNA_S-dermatodea_contig1189.1188.1 vs. uniprot
Match: A0A836C882_9STRA (Putative rRNA methylase-domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C882_9STRA)

HSP 1 Score: 163 bits (413), Expect = 1.830e-44
Identity = 85/198 (42.93%), Postives = 122/198 (61.62%), Query Frame = 0
Query:  268 LSHLLWRQVAGPGDTVVDCTAGNGYDTLELAKIV---------ALNDGQGKIYAMDVQDRALDATRARLDAELGQTAVKRVKLTKGNFRQLPAELGP----MSVQLMVYNLGWLPGGDKSITTELEDTLESIEAAKRLMKSGGMISVMLYRGHAEGERETEAVLEYARGLTHYHWRVYVHERVNRP-GSPVLLTIYRL 451
            L+HLLW+    PGD V+DCTAG GYD+L LA+++         A    QG++  +DVQ+ A+  T+ARL   L   A++R+ + + +F +LP    P     SV L+ YNLG+LPG DKS+ + ++DTL+S+  A +L+K GG ISV  Y GH EG  E  AV E+  GL    WRV+ H R+N P G P+L+  Y++
Sbjct:    2 LAHLLWKSAVSPGDIVIDCTAGKGYDSLVLARLLFPDSALDGEAAAAAQGQLVCIDVQESAVAQTQARLQQALPPQAMQRISVLQQSFCELPPACEPPIAERSVALVAYNLGFLPGSDKSVCSTVQDTLDSLNKASKLVKLGGAISVTCYPGHEEGAAEVAAVKEWGAGLATREWRVFEHSRLNSPEGVPLLVVAYKV 199          
BLAST of mRNA_S-dermatodea_contig1189.1188.1 vs. uniprot
Match: A0A0U5JHE0_9BACT (Putative rRNA methylase n=1 Tax=Candidatus Protochlamydia naegleriophila TaxID=389348 RepID=A0A0U5JHE0_9BACT)

HSP 1 Score: 160 bits (405), Expect = 2.490e-43
Identity = 81/187 (43.32%), Postives = 118/187 (63.10%), Query Frame = 0
Query:  264 SHSHLSHLLWRQVAGPGDTVVDCTAGNGYDTLELAKIVALNDGQGKIYAMDVQDRALDATRARLDAELGQTAVKRVKLTKGNFRQLPAELGPMSVQLMVYNLGWLPGGDKSITTELEDTLESIEAAKRLMKSGGMISVMLYRGHAEGERETEAVLEYARGLTHYHWRVYVHERVNRPGSPVLLTIYR 450
            SH  L+H  W ++  PGD  +D T GNG+DTL+L ++ AL   +G+IYA+D Q  A++ T+A L+  L  + ++ + L  G   Q PA + P S++L+VYNLG+LPGGDK+ TTE   TL S++ A  L+  GG ISV  Y GH EG RE EA+LE+ + L+   W    H+ +NR  +P LL + +
Sbjct:   10 SHLDLAHHYWSKLLKPGDRAIDATCGNGHDTLKLCQL-ALCQSEGEIYALDRQSEAIENTKAYLNQNLLPSQIEHIHLILGCHSQFPASITPTSIKLIVYNLGYLPGGDKAETTETSTTLLSLQEALNLVVPGGAISVTCYPGHLEGAREEEAILEWIKTLSPLEWSACHHKWINRRHAPSLLLLQK 195          
BLAST of mRNA_S-dermatodea_contig1189.1188.1 vs. uniprot
Match: A0A2H9SWP1_9BACT (rRNA methyltransferase n=1 Tax=Parachlamydia sp. TaxID=2052048 RepID=A0A2H9SWP1_9BACT)

HSP 1 Score: 160 bits (404), Expect = 3.290e-43
Identity = 85/187 (45.45%), Postives = 122/187 (65.24%), Query Frame = 0
Query:  264 SHSHLSHLLWRQVAGPGDTVVDCTAGNGYDTLELAKIVALNDGQGKIYAMDVQDRALDATRARLDAELGQTAVKRVKLTKGNFRQLPAELGPMSVQLMVYNLGWLPGGDKSITTELEDTLESIEAAKRLMKSGGMISVMLYRGHAEGERETEAVLEYARGLTHYHWRVYVHERVNRPGSPVLLTIYR 450
            SH  L+H  W  +  PGDTV+D T GNG+DTL+LA++ AL+  QG++  +D+Q+++L AT ARL   L    ++RV+L        P ++ P SV+L+VYNLG+LP GDKS TT  + T+ES++AA  L+  GG+I V  Y GH EGE+E +AVL++ RGL  + W     + +NR  +P LL I R
Sbjct:   10 SHLDLAHQYWTILVRPGDTVIDATCGNGHDTLKLAQL-ALHSDQGQVIGIDLQEQSLLATNARLMEHLSPDLLRRVQLICSCHSSFP-DIPPKSVRLIVYNLGYLPKGDKSRTTRAKTTIESLQAAFPLLMPGGVICVTCYPGHEEGEKEEKAVLDFVRGLDPHEWCCTYQQWMNRQKAPGLLLIQR 194          
BLAST of mRNA_S-dermatodea_contig1189.1188.1 vs. uniprot
Match: A0A5C7WT25_9PROT (Methyltransferase domain-containing protein n=1 Tax=Nitrosomonas sp. TaxID=42353 RepID=A0A5C7WT25_9PROT)

HSP 1 Score: 159 bits (401), Expect = 9.060e-43
Identity = 81/189 (42.86%), Postives = 118/189 (62.43%), Query Frame = 0
Query:  264 SHSHLSHLLWRQVAGPGDTVVDCTAGNGYDTLELAKIVALNDGQGKIYAMDVQDRALDATRARLDAELGQTAVKRVKLTKGNFRQLPAELGPMSVQLMVYNLGWLPGGDKSITTELEDTLESIEAAKRLMKSGGMISVMLYRGHAEGERETEAVLEYARGLTHYHWRVYVHERVNRP-GSPVLLTIYRL 451
            SH  L+H  W+Q+   GDTV+D T GNG+DTL LA++V ++D  G +Y +D+Q  A+D +R  L  EL    ++R+ L +      P  +   SV+L+VYNLG+LPGG+KS+TT +E TL+S+ AA +L+  GG +S+ LY GH EG  E   VL   R L+   W    H+ +NRP  +P LL + +L
Sbjct:    9 SHLDLAHTYWKQLVSIGDTVIDATCGNGHDTLMLARLV-IDDSAGDVYGLDIQSTAIDNSRQLLHQELPTHHLQRIHLLQQCHSTFPDMITAASVKLIVYNLGYLPGGNKSLTTRVETTLQSLNAAVKLLSPGGCLSITLYPGHPEGAIEESQVLPLIRSLSSSEWSCCHHQWINRPISAPSLLLVQKL 196          
BLAST of mRNA_S-dermatodea_contig1189.1188.1 vs. uniprot
Match: A0A7W1GVU4_9BACT (Class I SAM-dependent methyltransferase n=1 Tax=Parachlamydiaceae bacterium TaxID=2052176 RepID=A0A7W1GVU4_9BACT)

HSP 1 Score: 155 bits (393), Expect = 1.380e-41
Identity = 78/187 (41.71%), Postives = 116/187 (62.03%), Query Frame = 0
Query:  264 SHSHLSHLLWRQVAGPGDTVVDCTAGNGYDTLELAKIVALNDGQGKIYAMDVQDRALDATRARLDAELGQTAVKRVKLTKGNFRQLPAELGPMSVQLMVYNLGWLPGGDKSITTELEDTLESIEAAKRLMKSGGMISVMLYRGHAEGERETEAVLEYARGLTHYHWRVYVHERVNRPGSPVLLTIYR 450
            SH  L+H  W+++   GD+V+D T GNG DTL LA++  L +G+G IYAMD+Q +ALD+ R  L   L       ++   G   Q P E+ P++++L+VYNLG+LPGGDK  TT++E TL+S+E+AK L+  GG++ +  Y GH  G  E E ++ +A  L +  W    H  +NR  SP LL + +
Sbjct:   10 SHLDLTHQYWKKLIQQGDSVIDATCGNGKDTLCLAQLT-LAEGKGIIYAMDIQKQALDSARHYLSMHLSPQQFLDIEFILGCHSQFPVEIKPLTIKLIVYNLGYLPGGDKKQTTQMESTLKSLESAKNLIAPGGVLCITCYPGHDAGAIEEEGLMIFAANLPNTEWSCCHHRWLNREKSPSLLLLQK 195          
BLAST of mRNA_S-dermatodea_contig1189.1188.1 vs. uniprot
Match: UPI001BC91B08 (methyltransferase domain-containing protein n=1 Tax=Parachlamydia sp. AcF125 TaxID=2795736 RepID=UPI001BC91B08)

HSP 1 Score: 155 bits (392), Expect = 2.180e-41
Identity = 82/187 (43.85%), Postives = 115/187 (61.50%), Query Frame = 0
Query:  264 SHSHLSHLLWRQVAGPGDTVVDCTAGNGYDTLELAKIVALNDGQGKIYAMDVQDRALDATRARLDAELGQTAVKRVKLTKGNFRQLPAELGPMSVQLMVYNLGWLPGGDKSITTELEDTLESIEAAKRLMKSGGMISVMLYRGHAEGERETEAVLEYARGLTHYHWRVYVHERVNRPGSPVLLTIYR 450
            SH  ++H  W+++  PGDTV+D T GNG+DTL LAK+V LN   GK+  MDVQ +A+  T+ RL  E     ++R+ L        P +  P  V+L+VYNLG+LP GDKS+TT +  TL S++AA  ++  GG IS+  Y GHAEG+RE +A+L + RGL    W       +NR  +P LL I +
Sbjct:   10 SHLDVAHHYWKKLVQPGDTVIDATCGNGHDTLVLAKLV-LNSPSGKVIGMDVQSQAIKNTQERLAKEFSANQMQRIHLHCACHSTFPVQ-APHVVKLIVYNLGYLPNGDKSLTTCVNTTLLSLQAALSIITPGGAISLTCYPGHAEGKREEQAILSFVRGLQPQEWSCSYQTWINRHQAPGLLFIQK 194          
BLAST of mRNA_S-dermatodea_contig1189.1188.1 vs. uniprot
Match: A0A7W1U209_9BACT (Methyltransferase domain-containing protein n=1 Tax=Parachlamydiaceae bacterium TaxID=2052176 RepID=A0A7W1U209_9BACT)

HSP 1 Score: 154 bits (389), Expect = 4.450e-41
Identity = 78/184 (42.39%), Postives = 115/184 (62.50%), Query Frame = 0
Query:  265 HSHLSHLLWRQVAGPGDTVVDCTAGNGYDTLELAKIVALNDGQGKIYAMDVQDRALDATRARLDAELGQTAVKRVKLTKGNFRQLPAELGPMSVQLMVYNLGWLPGGDKSITTELEDTLESIEAAKRLMKSGGMISVMLYRGHAEGERETEAVLEYARGLTHYHWRVYVHERVNRPGSPVLLTI 448
            H  ++H LW +   PGDTV+D T GNG DT  LAK+ ALN  QG ++A+D+Q +A+  TR  L+ EL Q    R+   +      P  +   SV+L++YNLG+LPG +K++TT  E TL+S++ A++L+   G+I V  Y GH EG++E  A+L+Y R L    W+V   + VNR G+P LL +
Sbjct:    7 HLDMAHSLWHESVQPGDTVIDATCGNGQDTRILAKL-ALNAHQGTLFALDIQAQAIVTTRNLLEQELPQDLFNRITFLEQCHSHFPEAVLENSVRLIIYNLGYLPGANKALTTRTETTLQSLQEAQKLLLENGIICVTCYPGHDEGKKEEAALLDYVRSLPTTEWQVSFTQWVNRVGAPSLLVL 189          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1189.1188.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LAV3_ECTSI1.250e-10363.24Methylase-related n=1 Tax=Ectocarpus siliculosus T... [more]
A0A6H5JPN0_9PHAE5.820e-10062.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A0G4GWR6_VITBC5.920e-4844.67Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]
A0A836C882_9STRA1.830e-4442.93Putative rRNA methylase-domain-containing protein ... [more]
A0A0U5JHE0_9BACT2.490e-4343.32Putative rRNA methylase n=1 Tax=Candidatus Protoch... [more]
A0A2H9SWP1_9BACT3.290e-4345.45rRNA methyltransferase n=1 Tax=Parachlamydia sp. T... [more]
A0A5C7WT25_9PROT9.060e-4342.86Methyltransferase domain-containing protein n=1 Ta... [more]
A0A7W1GVU4_9BACT1.380e-4141.71Class I SAM-dependent methyltransferase n=1 Tax=Pa... [more]
UPI001BC91B082.180e-4143.85methyltransferase domain-containing protein n=1 Ta... [more]
A0A7W1U209_9BACT4.450e-4142.39Methyltransferase domain-containing protein n=1 Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010719Putative rRNA methylasePFAMPF06962rRNA_methylasecoord: 310..448
e-value: 2.8E-37
score: 127.8
IPR010719Putative rRNA methylasePANTHERPTHR35276FAMILY NOT NAMEDcoord: 244..450
NoneNo IPR availableGENE3D3.40.50.150coord: 259..451
e-value: 9.6E-54
score: 183.7
IPR029063S-adenosyl-L-methionine-dependent methyltransferaseSUPERFAMILY53335S-adenosyl-L-methionine-dependent methyltransferasescoord: 266..414

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig1189contigS-dermatodea_contig1189:6868..12039 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig1189.1188.1mRNA_S-dermatodea_contig1189.1188.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig1189 6850..12821 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig1189.1188.1 ID=prot_S-dermatodea_contig1189.1188.1|Name=mRNA_S-dermatodea_contig1189.1188.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=452bp
MSIFCANCGGGIGVKRGLRACVMMAALASPSKAFLPTLPTLLRQSRNALR
TSALQNPASSARPRRALTSLSAADNNSSNSARDAAMAAVRAAEDELGRQV
DDLGDAAAGADDVREAVAAARAAARGAMDSLRRGGAGFPGGAAAAEGPRD
DVTSPARAAVEAALSAVAGAETTPPTESFSAARDAIDMAQAALGRRDSAA
AELKQGVAATGMASAAGAGVGVDNGDGGGSGGGLSEEGEGGGQEEEPTRE
PDSARTTRNNPAASHSHLSHLLWRQVAGPGDTVVDCTAGNGYDTLELAKI
VALNDGQGKIYAMDVQDRALDATRARLDAELGQTAVKRVKLTKGNFRQLP
AELGPMSVQLMVYNLGWLPGGDKSITTELEDTLESIEAAKRLMKSGGMIS
VMLYRGHAEGERETEAVLEYARGLTHYHWRVYVHERVNRPGSPVLLTIYR
L*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010719rRNA_methylase
IPR029063SAM-dependent_MTases