mRNA_S-dermatodea_contig11883.1183.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig11883.1183.1 vs. uniprot
Match: D7FZM4_ECTSI (CRAL-TRIO domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=D7FZM4_ECTSI) HSP 1 Score: 428 bits (1100), Expect = 1.430e-136 Identity = 256/426 (60.09%), Postives = 291/426 (68.31%), Query Frame = 1
Query: 253 LSAPCPASSPCEQCDELPRRRNFSEISHHSGSGGGVGGPSRRVTAELRRADAWSHAGLVVGPLVGGLSYGRSLGWRWL----DGG------DSRPGFVAAAATCSCVLLFA--AWRSPRGTGGAD-----GGGQGEGKGWVFSRRRAAG-----GRGYSFPAGVQEEGEEEAQAREDEEAAVPLLGDASVRSSPGP---VSEPPDRADVGVDMEAG-GAGVPGVVSARYLRACGGDATAAKKMWNETIRWRRETGAERSLSSPQPTLEIIKECYPYFAHGRSKKGEVVVYERTGKMQFGRLAEAGVTPSDMQMHYAFFNDFVFGKLLPSDD--AQLMTVLDVGDLRLSTIRGNTVVTKYLAATAEVMQKHYPERQSRILVVNAPWWFAGIWKTVSGMLASGTQAKLQIRGTNFLPTLLEHVDMSEV 1446
+SAPCP SS CE+C P R+FSEIS S G S + A LRRAD+ H GLV+G L+GGL YGR G DGG D +P FVA AA CS VL A AWR G G G+ G VF RR G GR +F G ++ GEEE PLL S+ +PGP SEP +R DV EAG G G VS+RYL AC G+ AAK MW+ET++WR +TGAERSLS+PQPTL+IIK+CYPYF HGRSKKGEVVVYE+TGKMQFGRLA+AGV+P DMQMHYAFFNDFVF KL DD A+LMTVLDVG+LRL+TI+ NTVVTKYLAATAEVMQKHYPERQSRILVVNAPWWFAGIWK VSG+L+SGTQAKLQIRG NFLPTLLEHVD S++
Sbjct: 1 MSAPCPRSSSCERCSAFPGSRHFSEIS--SKGGDLSSNSSSTIAAGLRRADSGWHLGLVLGLLIGGLCYGRGGGGGSSVVAKDGGEGTSWFDDKPAFVACAAACSVVLSVAVVAWRRTGNDGAIKSETVVGCGRTTGALSVFGRRLRHGKGGSAGRKEAFGEG-EDGGEEE-----------PLLAGGSL-DAPGPSSSASEPGERTDV----EAGAGGGADCPVSSRYLAACKGNTVAAKAMWDETVKWRTDTGAERSLSTPQPTLDIIKQCYPYFVHGRSKKGEVVVYEQTGKMQFGRLADAGVSPFDMQMHYAFFNDFVFSKLNDEDDDDAKLMTVLDVGELRLATIKNNTVVTKYLAATAEVMQKHYPERQSRILVVNAPWWFAGIWKGVSGVLSSGTQAKLQIRGKNFLPTLLEHVDASQI 407
BLAST of mRNA_S-dermatodea_contig11883.1183.1 vs. uniprot
Match: A0A835YSU7_9STRA (CRAL-TRIO domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSU7_9STRA) HSP 1 Score: 204 bits (520), Expect = 1.180e-53 Identity = 104/226 (46.02%), Postives = 141/226 (62.39%), Query Frame = 1
Query: 847 VSARYLRACGGDATAAKKMWNETIRWRRETGAERSLSSPQPTLEIIKECYPYFAHGRSKKGEVVVYERTGKMQFGRLAEAGVTPSDMQMHYAFFNDFVFGKLLPSD------------------DAQLMTVLDVGDLRLSTIRGNTVVTKYLAATAEVMQKHYPERQSRILVVNAPWWFAGIW-----------------KTVSGMLASGTQAKLQIRGTNFLPTL 1419
V RY+RA G +A AA K W+ + WRRE + L+ PQP I+KECYP+F HGR++ G VV YE G+M FGRLA AGVTP D+Q HY F N++++ +L P D D QLMTVLDV L +ST++ NTV+ +Y+ A+AEVMQ HYP+RQ+RI+++NAPWWFAG W + +G+L++ T +KLQI GT++L L
Sbjct: 233 VPGRYVRAFG-EANAAAK-WSASCEWRRERRVDEVLTVPQPVFTIMKECYPHFLHGRARDGGVVCYENPGRMDFGRLAAAGVTPDDLQRHYCFVNEYIWQRLSPGDXXXXXXXXXXXXXXXXXXDDQLMTVLDVNGLGMSTLKNNTVMHRYMRASAEVMQAHYPDRQARIVIINAPWWFAGAWLDCIXXXXXXXXXXXXXHSFAGVLSANTTSKLQICGTDYLAAL 456
BLAST of mRNA_S-dermatodea_contig11883.1183.1 vs. uniprot
Match: A0A7R9U9K9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U9K9_9STRA) HSP 1 Score: 154 bits (388), Expect = 1.050e-38 Identity = 74/201 (36.82%), Postives = 119/201 (59.20%), Query Frame = 1
Query: 832 GVPGVVSARYLRACGGDATAAKKMWNETIRWRRETGAERSLSSPQPTLEIIKECYPYFAHGRSKKGEVVVYERTGKMQFGRLAEAGVTPSDMQMHYAFFNDFVFGKL-LPSDDAQLMTVLDVGDLRLSTIRGNTVVTKYLAATAEVMQKHYPERQSRILVVNAPWWFAGIWKTVSGMLASGTQAKLQIRGTNFLPTLLEHV 1431
G +V R+L A GGD A + + T WR E +R LS+P+PT + +K +P+F HGRS+KG VV YER G + GRLA +G++ D+ H F +++F L DA+++ V DV + + +++G + +L + +VMQ HYPER + ++NAP+WF W+ V ++A T+A+++I G NF L ++
Sbjct: 122 GEASMVPERFLLAEGGDLERASQRFAATQLWREEHELDRVLSTPRPTFDKVKRLFPHFLHGRSRKGNVVRYERLGDIDAGRLAASGLSAVDLTNHLVFLAEYIFSHLDAHRPDAKVLVVCDVKGISIGSLKGE--ILSFLQMSTQVMQAHYPERMESMFIINAPFWFTSAWRVVGVLMAPQTRARIKILGANFQDELAAYI 320
BLAST of mRNA_S-dermatodea_contig11883.1183.1 vs. uniprot
Match: A0A7S2V2B7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2B7_9STRA) HSP 1 Score: 135 bits (341), Expect = 8.110e-32 Identity = 66/205 (32.20%), Postives = 118/205 (57.56%), Query Frame = 1
Query: 838 PGVVSARYLRACGGDATAAKKMWNETIRWRRETGAERSLSSPQPTLEIIKECYPYFAHGRSKKGEVVVYERTGKMQFGRLAEAGVTPSDMQMHYAFFNDFVFGKLLPSDDAQLMTVLDVGDLRLSTIRGNTVVTKYLAATAEVMQKHYPERQSRILVVNAPWWFAGIWKTVSGMLASGTQAKLQIRGTNFLPTLLEHVDMSEVRK 1452
P V RYL++C GD A+K WN T++WR+E G + L QP IK+ YP+F H R ++G V Y++ G+++ +L + GV ++ H+ F +++++ + P D+ ++ V DV + +++G VV +++ +++ HY ER + ++NAP WFA I++ V+ +L T K+ I GT+ L + E + + V K
Sbjct: 160 PCPVPLRYLKSCKGDVEEAQKRWNTTVKWRKENGVDDVLQKAQPHFHTIKKWYPHFIHSRDREGHPVYYDKLGEIKVEKLQQNGVDVEELLEHFIFHSEYLWKVVEPDDNFLMVAVEDVQGINAFSLQG--VVFEFIKHVSKMFSDHYCERSYKTFIINAPGWFAWIFRVVAPLLDPKTTEKISILGTD-LTEMHEAIGIENVPK 361
BLAST of mRNA_S-dermatodea_contig11883.1183.1 vs. uniprot
Match: A0A7S4KCE1_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4KCE1_9STRA) HSP 1 Score: 114 bits (285), Expect = 3.470e-23 Identity = 64/209 (30.62%), Postives = 99/209 (47.37%), Query Frame = 1
Query: 859 YLRACGGDATAAKKMWNETIRWRRETGAERSLSSPQPTLEIIKECYPYFAHGRSKKGEVVVYERTGKMQFGRLAEAGVTPSDMQMHYAFFNDFVFGKLLPSDDAQ-------------LMTVLDVGDLRLSTIRGNTVVTKYLAATAEVMQKHYPERQSRILVVNAPWWFAGIWKTVSGMLASGTQAKLQIRGTNFLPTLLEHVDMSEV 1446
+L C G A MW ET +WR GA + ++ + IK+ YP+FAHG SK+G +VYE GKM L G DM Y +F +F+ L + Q L V+D+ LS++ G+ V +Y+ +E+ HYP +R V+N+P+W AG W + G+L L + + + L E +D ++
Sbjct: 283 FLEICNGKREKAGAMWAETRQWRVRDGAWKIHTTRHEWFQQIKQAYPHFAHGYSKQGYPIVYECPGKMNLKNLLRQGCGVEDMLFSYVYFMEFIQSVLCRLPELQSRRRGSPDPEGWGLTLVMDISGASLSSLSGDVV--RYMKRASEINSAHYPLSLNRAFVINSPFWLAGAWSGIRGILPESVHVDL-LSSSAYGDKLREWIDDDQI 488
BLAST of mRNA_S-dermatodea_contig11883.1183.1 vs. uniprot
Match: F0WDD0_9STRA (Phosphoinositol transporter putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WDD0_9STRA) HSP 1 Score: 105 bits (262), Expect = 3.070e-20 Identity = 61/208 (29.33%), Postives = 103/208 (49.52%), Query Frame = 1
Query: 847 VSARYLRACGGDATAAKKMWNETIRWRRETGAERSLSSPQPTLEIIKECYPYFAHGRSKKGEVVVYERTGKMQFGRLAEAGVTPSDMQMHYAFFNDFVFGKLLPSDDA-----------QLMTVLDVGDLRLSTIRGNTVVTKYLAATAEVMQKHYPERQSRILVVNAPWWFAGIWKTVSGMLASGTQAKLQIRGTNFLPT-LLEHVD 1434
+ A +L A + + A + + T++WR E ++ L +P P +IK Y + H R K G + +E+ + L +A V+ D+ HY F +F K + SD +L+ VLD + + + G + +++ A +MQ+HYP+R +IL++N P WF +WK V G+L T+ K I PT LL+ +D
Sbjct: 706 IPASFLIAESENVSKAMERYQATLQWRVEMNVDKILETPHPKYYLIKSFYKQYIHKRDKLGHPIYFEKLATINMKALQKAAVSLDDLFYHYLFNIEFTV-KYVASDTCACQACCASKTRKLLIVLDARGIGMKDMSGEFL--EFVRKGAGMMQRHYPQRSYKILIINVPSWFGMVWKGVKGLLNEATRQKTNILSETEAPTALLQLID 910
BLAST of mRNA_S-dermatodea_contig11883.1183.1 vs. uniprot
Match: A0A812S4L3_9DINO (SFH1 protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812S4L3_9DINO) HSP 1 Score: 90.5 bits (223), Expect = 1.610e-16 Identity = 52/198 (26.26%), Postives = 96/198 (48.48%), Query Frame = 1
Query: 862 LRACGGDATAAKKMWNETIRWRRETGAERSLSSPQPTLEIIKECYPYFAHGRSKKGEVVVYERTGKMQFGRLAEAGVTPSDMQMHYAFFNDFVFGKLLPSDDAQLMTVL-DVGDLRLSTIRGNTVVTKYLAATAEVMQKHYPERQSRILVVNAPWWFAGIWKTVSGMLASGTQAKLQI--RGTNFLPTLLEHVDMSEV 1446
L+A GD A + W +T+RWR + + +S P P I+ YP + H K+G +E G++ L G+T D++ +Y + F + L D A T++ D+ LS + + + T+ ++Q+H+PER+ ++V+NAP W+ ++ + + KL++ L TL E +D+ +
Sbjct: 66 LKAARGDRRQALQRWAQTLRWRCQIDDDGIVSRPNPNYFRIQPHYPTYLHLPDKEGRTTYWELLGRIDMAGLHREGITVDDIRENYVWQTLFTWDVWLKRDGAAEGTIIVDMQGFSLSMLTPRLI--QMFVRTSSLIQRHFPEREHVLIVINAPEWWGRMYDLFGPLFPESQRQKLRVCVDKDKSLQTLTEFIDVRNI 261
BLAST of mRNA_S-dermatodea_contig11883.1183.1 vs. uniprot
Match: A0A8J9RGG6_9CHLO (Probable SEC14-like protein 5 at C-terminar half n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9RGG6_9CHLO) HSP 1 Score: 92.0 bits (227), Expect = 5.560e-16 Identity = 55/182 (30.22%), Postives = 89/182 (48.90%), Query Frame = 1
Query: 856 RYLRACGGDATAAKKMWNETIRWRRETGAERSLSSPQPTLEIIKECYPYFAHGRSKKGEVVVYERTGKMQFG--RLAEAGVTPSDMQMHYAFFNDFVFGKLLPSDDAQLMTVLDVGDLRLSTIRG-NTVVTKYLAATAEVMQKHYPERQSRILVVNAPWWFAGIWKTVSGMLASGTQAKLQI 1392
R+ G D AA+K T WR+ETG L PQP E IK + + G ++ G V + G M+ G + +G+ D+ H AF NDF++ L + + + DL+ +R + + +++KHYPER R LVVNAP +F +W+ V ++ + T+ +L +
Sbjct: 553 RFTVGYGHDKAAARKAMQRTYDWRKETGTFHILDQPQPHFETIKGFFDHGVVGMTRTGRCVWVMKAGMMREGWQKFKTSGLNDRDIARHIAFCNDFLYKVLDTEPMPEGGRTVWINDLKGVGLRDIGSKAMDFGLQQLGLLEKHYPERMGRALVVNAPSFFNILWRIVQPLIPAATKKRLVV 734
BLAST of mRNA_S-dermatodea_contig11883.1183.1 vs. uniprot
Match: A0A368R584_SETIT (CRAL-TRIO domain-containing protein n=1 Tax=Setaria italica TaxID=4555 RepID=A0A368R584_SETIT) HSP 1 Score: 90.5 bits (223), Expect = 8.140e-16 Identity = 58/204 (28.43%), Postives = 94/204 (46.08%), Query Frame = 1
Query: 856 RYLRACGGDATAAKKMWNETIRWRRETGAERSLSSPQ-PTLEIIKECYPYFAHGRSKKGEVVVYERTGKMQFGRLAEAGVTPSDMQMHYAFFNDFVFGKLLPSDDA------QLMTVLDVGDLRLSTIRGNTVVTKYLAATAEVMQKHYPERQSRILVVNAPWWFAGIWKTVSGMLASGTQAKLQIRGTNFLPTLLEHVDMSEV 1446
R+L+A D AK+MW++T++WR+E GA+ L + + + +CYP HG K+G V ER G++ RL + ++ H F K A Q T+LDV + + + + ++ +YPE R+ ++NA F +W TV L T AK+ + G + LLE +D SE+
Sbjct: 109 RFLKARKFDIEKAKQMWSDTLKWRKEFGADTILKEFKFEEADKVAQCYPQGYHGVDKEGRPVYIERLGQIDVNRLMQVTTMDRFVKNHVKEFEKNFAVKFPACSIAAKRHIDQSTTILDVQGVGMKQF--SKAARDLIGMLQKIDGDNYPESLCRMFIINAGQGFRLLWSTVKSFLDPKTTAKIHVLGNKYQSKLLEVIDASEL 310
BLAST of mRNA_S-dermatodea_contig11883.1183.1 vs. uniprot
Match: A0A4U6UE48_SETVI (CRAL-TRIO domain-containing protein (Fragment) n=2 Tax=Setaria viridis TaxID=4556 RepID=A0A4U6UE48_SETVI) HSP 1 Score: 90.5 bits (223), Expect = 1.350e-15 Identity = 58/204 (28.43%), Postives = 94/204 (46.08%), Query Frame = 1
Query: 856 RYLRACGGDATAAKKMWNETIRWRRETGAERSLSSPQ-PTLEIIKECYPYFAHGRSKKGEVVVYERTGKMQFGRLAEAGVTPSDMQMHYAFFNDFVFGKLLPSDDA------QLMTVLDVGDLRLSTIRGNTVVTKYLAATAEVMQKHYPERQSRILVVNAPWWFAGIWKTVSGMLASGTQAKLQIRGTNFLPTLLEHVDMSEV 1446
R+L+A D AK+MW++T++WR+E GA+ L + + + +CYP HG K+G V ER G++ RL + ++ H F K A Q T+LDV + + + + ++ +YPE R+ ++NA F +W TV L T AK+ + G + LLE +D SE+
Sbjct: 109 RFLKARKFDIEKAKQMWSDTLKWRKEFGADTILKEFKFEEADKVAQCYPQGYHGVDKEGRPVYIERLGQIDVNRLMQVTTMDRFVKNHVKEFEKNFAVKFPACSIAAKRHIDQSTTILDVKGVGMKQF--SKAARDLIGMLQKIDGDNYPESLCRMFIINAGQGFRLLWSTVKSFLDPKTTAKIHVLGNKYQSKLLEVIDASEL 310 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11883.1183.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig11883.1183.1 >prot_S-dermatodea_contig11883.1183.1 ID=prot_S-dermatodea_contig11883.1183.1|Name=mRNA_S-dermatodea_contig11883.1183.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=489bp AVVCRQAFAGFLAGRMVGKVLGPRVAASRAGVATFLMACGFAVSVATHMFback to top mRNA from alignment at S-dermatodea_contig11883:148..6487- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig11883.1183.1 ID=mRNA_S-dermatodea_contig11883.1183.1|Name=mRNA_S-dermatodea_contig11883.1183.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=6340bp|location=Sequence derived from alignment at S-dermatodea_contig11883:148..6487- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig11883:148..6487- >mRNA_S-dermatodea_contig11883.1183.1 ID=mRNA_S-dermatodea_contig11883.1183.1|Name=mRNA_S-dermatodea_contig11883.1183.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=2934bp|location=Sequence derived from alignment at S-dermatodea_contig11883:148..6487- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |