mRNA_S-dermatodea_contig1179.1134.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig1179.1134.1
Unique NamemRNA_S-dermatodea_contig1179.1134.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
BLAST of mRNA_S-dermatodea_contig1179.1134.1 vs. uniprot
Match: A0A6H5JSW4_9PHAE (DIS3-like exonuclease 1 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSW4_9PHAE)

HSP 1 Score: 869 bits (2246), Expect = 6.300e-293
Identity = 595/1131 (52.61%), Postives = 673/1131 (59.50%), Query Frame = 1
Query:    1 IGVHIADVTRFVEADGPLDKEARVRATTIYLVHRRIDMLPALLSSDLCSLHAGQDRLAVSVVWEAEEDG-EDINICRRADGTPVCWFGRTVIHSEASMTYGQAQSLVEESKIVKPRGHEEPPPGQAGRDVQEGLQPALAQDLRLLTRFARTTRKERTKNGAIDLSQAGAELKFKIDPVTGTPLAVAGKEESEIHHTIAELMILANGAVAEKIQQTFPSAALVRVHTPPDPSRLTAFEGVAAKVGVGGTGKGGG-------GLSASLATAESGGFKGEA----GKVGLLKSLAVRAMSEAEYVSTDL--------------GGDRFGHFGLGLSHYTHFTSPIRRYADVVVHRLLLAAIGATPSTVSSERFGNFPAPARLTSGDGRLTFPPGE-------VGALPPSLAPSVMEMEEAAVGKAEFEAA-ERRARRAGAGDASFVTNPDGTRTYNKASGTSSATATRATF------GGRVPPPPGLEAFPEMATATPTADGDDLLDALLGLDVAGSSGRSGPVEAARAVGGS----ATSGDFNHTGLDGTPKMS---------FSEVTAVAAGDGAFGAQGAVGDSMLDALLGLDVGDVSTLGDDEAVPGESLIDGIISGKSFPGEDVTGEQVDAGCAEAGTVGSPPFDGAELGRLCRHLNDRNRRAKRLAQRCQDMFLSLFFKDHSEVVQGLVLSLRANGFIAYVPAFDAKGPVYLSDMDGQVQVDPALLGLPATAGAPPSKGFVSLPACRAFTGASITLASTP---------ASALAGAARYPS-SGEGGEGEEVLEVRPPPGTGGKVLKLKVLDGVSLRISCDILPTQARLPKVRFLLAGVGNHLSKTKPTKTQRTSDAGASKVPSAQAHEFHRTKGG--RDHILPSPSDQADIDADGSRVAVLD------------------GGGASGTRGGGGLYRILQGTLDNALRTDPVSTRHDSDVDIVAPSSTLPHGPGLGSHPNKLGTRAGNIGAGNEPVPEKQKRGKKKASPAKATERADIGAGRALFGGFVPSREAPAASLYDFGDSSSRA-----------DGG---LSALGSIYGNGAGRGI----GGGTLETLDDAKVRQYTQEATVRAQRLGAEKRSSRISRSKRQG 3090
            IGVHIADVTRFVEAD PLD+EAR RATT+YLVHRRIDMLPALLSSDLCSLHAG+DRL+VSVVWEAEEDG EDI IC+ ADG+ VCWFGRTVIHS+ASMTY QAQ LVE+ +I K R HEEPPPGQAGRDV+EGLQP LA DLRLLTRFART R ER +NGAIDLSQAGAELKFKIDPVTGTPLAVAG+E+SEIH TIAELMILAN AVAEKIQ  FPS ALVRVH  PDPSRLTAFEGVAAKVGV  T +  G       GLS SLAT E G  +G+      K GLLKSLAVRAMSEAEYVST                 G RFGHFGLGLS YTHFTSPIRRYAD+VVHRLLLA++G + +  S+        P RL SGDG    P  +       V ALP SLAPSVMEMEE+A    E +AA ERR+R AGAGDASFV NPDGTRT+                        R+PPPPG+E+FPE+       DGDDLLD+LLGL+V+    RS   +AA A  GS     +SGD +     GT K                                 S+LD+LLGL++G  +     EA PGE   D I +     G+   GE       +     SPPF GAELGRLC HLNDRNRRAKRLAQRCQ+MFL L+FKDHS+VVQGLVLSLR+NGFIAYVPAFDAKGPVY+SD DGQVQVDPALLGL A AG PPSK F +L ACRA  GA ++L STP         A+  AG    P   GEG E EEVLEVRPPPG GGKVL+L+VLD VSL+    I   Q      R +  G     ++  P +    +      V   +  +    +G   RD   P  +    +D  G  VA  +                                                                                                  G      +KA  R+++GAGRALFGGFVP R APAASLYDFG     A           DGG   +S+L SIY    GRG+    GGG LETLDDA+VRQYTQEAT RAQRLGAEKRSSRI++SKRQG
Sbjct:  199 IGVHIADVTRFVEADSPLDREARARATTVYLVHRRIDMLPALLSSDLCSLHAGEDRLSVSVVWEAEEDGDEDIRICKGADGSRVCWFGRTVIHSKASMTYDQAQMLVEDGRIDKKRRHEEPPPGQAGRDVREGLQPGLAHDLRLLTRFARTARAERVRNGAIDLSQAGAELKFKIDPVTGTPLAVAGQEDSEIHDTIAELMILANSAVAEKIQGAFPSQALVRVHASPDPSRLTAFEGVAAKVGVNSTSESSGKPNSSAGGLSQSLATVEGGALRGQGEGGKSKAGLLKSLAVRAMSEAEYVSTGTLSDHQAHGKGLEAQEGSRFGHFGLGLSLYTHFTSPIRRYADIVVHRLLLASLGVSVTRASNATHHITKPPPRLLSGDGFNVHPAAKREEVDEGVIALPSSLAPSVMEMEESADVNLETDAAAERRSRSAGAGDASFVINPDGTRTHXXXXXXXXXXXXXXXXXXXXXXASRLPPPPGMESFPELGGPD---DGDDLLDSLLGLEVS----RSTTAKAAPAPAGSDSGFGSSGDVS----GGTMKTKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLLDSLLGLEIGPTTARHGGEATPGEQDQDDITAHGGGGGD--AGEAFSPSARDNVVTASPPFGGAELGRLCTHLNDRNRRAKRLAQRCQEMFLRLYFKDHSQVVQGLVLSLRSNGFIAYVPAFDAKGPVYISDRDGQVQVDPALLGLSAGAGNPPSKAFATLQACRALPGAGVSLVSTPRAGKSNAVSANCKAGRGGGPGRDGEGEEDEEVLEVRPPPGGGGKVLRLRVLDSVSLQGDRKICAEQNE----RAIECGPSTRCTRAAPCQEVVLASKSIQMVCGWEVGKAWGERGAAVRDCCGPKRAGGHRMDEGGKVVAEEEEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEXXXXXXXXXXXXEGMDFTGCSKAR-RSEVGAGRALFGGFVPRRHAPAASLYDFGGKGQGAGSEQGGGETGGDGGFAGVSSLPSIYNQVVGRGLVPAGGGGVLETLDDARVRQYTQEATTRAQRLGAEKRSSRITKSKRQG 1311          
BLAST of mRNA_S-dermatodea_contig1179.1134.1 vs. uniprot
Match: D8LN43_ECTSI (DIS3-like exonuclease 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN43_ECTSI)

HSP 1 Score: 591 bits (1523), Expect = 1.240e-187
Identity = 334/465 (71.83%), Postives = 362/465 (77.85%), Query Frame = 1
Query:    1 IGVHIADVTRFVEADGPLDKEARVRATTIYLVHRRIDMLPALLSSDLCSLHAGQDRLAVSVVWEAEEDG-EDINICRRADGTPVCWFGRTVIHSEASMTYGQAQSLVEESKIVKPRGHEEPPPGQAGRDVQEGLQPALAQDLRLLTRFARTTRKERTKNGAIDLSQAGAELKFKIDPVTGTPLAVAGKEESEIHHTIAELMILANGAVAEKIQQTFPSAALVRVHTPPDPSRLTAFEGVAAKVGVGGTGKGGG-------GLSASLATAESGGFKGEA----GKVGLLKSLAVRAMSEAEYVSTDLGGD--------------RFGHFGLGLSHYTHFTSPIRRYADVVVHRLLLAAIGATPSTVSSERFGNFPAPARLTSGDGRLTFPPGEVG-------ALPPSLAPSVMEMEEAAVGKAEFEAA-ERRARRAGAGDASFVTNPDGTRTYNKASGTSSATATR 1293
            IGVHIADVTRFVEAD PLD+EAR RATT+YLVHRRIDMLPALLSSDLCSLHAG+DRL+VSVVWEAEEDG EDI +C+ ADG+PVCWFGRTVIHS+ASMTY QAQ LVE+ +I K +GHEEPP GQAGRDV+EGLQP LA DLRLLTRFART R ER +NGAIDLSQAGAELKFKIDPVTGTPLAVAGKE+SEIHHTIAELMILAN AVAEKIQ  FPS ALVRVH  PDPSRLTAFEGVAAKVGV  T +  G       GLS SLAT E G  +G+      K GLLKSLAVRAMSEAEYVST    D              RFGHFGLGLSHYTHFTSPIRRYAD+VVHRLLLA++G + +  S+        P RL SGDG    P    G       ALP SLAPSVMEMEEAAVG  E +AA ERR RRAGAGDASFV NPDGTRTY+KASG +  ++TR
Sbjct:  605 IGVHIADVTRFVEADSPLDREARARATTVYLVHRRIDMLPALLSSDLCSLHAGEDRLSVSVVWEAEEDGDEDIRLCKGADGSPVCWFGRTVIHSKASMTYDQAQMLVEDGRIEKKKGHEEPPSGQAGRDVREGLQPGLAHDLRLLTRFARTARAERVRNGAIDLSQAGAELKFKIDPVTGTPLAVAGKEDSEIHHTIAELMILANSAVAEKIQGAFPSQALVRVHASPDPSRLTAFEGVAAKVGVNSTSESSGKPNSSAGGLSQSLATVEGGALRGQGEGGKSKAGLLKSLAVRAMSEAEYVSTGTLSDHQAHGKGLEAQEESRFGHFGLGLSHYTHFTSPIRRYADIVVHRLLLASLGVSVTQASNATHHTTKPPPRLPSGDGFNAPPAANRGDDDEGVLALPSSLAPSVMEMEEAAVGMVEADAAAERRPRRAGAGDASFVINPDGTRTYSKASGLAGVSSTR 1069          
BLAST of mRNA_S-dermatodea_contig1179.1134.1 vs. uniprot
Match: D8LN42_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN42_ECTSI)

HSP 1 Score: 384 bits (987), Expect = 6.160e-119
Identity = 258/527 (48.96%), Postives = 294/527 (55.79%), Query Frame = 1
Query: 1594 MLDALLGLDVGDVSTLGDDEAVPGESLIDGIISGKSFPGEDVTGEQVDAGCAEAGTVGSPPFDGAELGRLCRHLNDRNRRAKRLAQRCQDMFLSLFFKDHSEVVQGLVLSLRANGFIAYVPAFDAKGPVYLSDMDGQVQVDPALLGLPATAGAPPSKGFVSLPACRAFTGASITLASTPASALAGA--ARYPSSG--------EGGEGEEVLEVRPPPGTGGKVLKLKVLDGVSLRISCDILPTQARLPKVRFLLAGVGNHLSKTKPTKTQRTSDAGASKVPSAQAHEFHRTKGGRDHILPSPSDQADIDADGSRVAVLDGGGASGTRGGGGLYRILQGTLDNALRTDPVSTRHDSDVDIVAPSSTLPHGPGLGSHPNKLGTRAGNIGAGNEPVPEKQKRGKKKASPAKATERADIGAGRALFGGFVPSREAPAASLYDFGDSSSRA-----------DGG---LSALGSIYGNGAGRGI----GGGTLETLDDAKVRQYTQEATVRAQRLGAEKRSSRISRSKRQG 3090
            MLDALLGL++G  +     EA PGE   D I +     G+  TGE       +     SPPF GAELGRLC HLNDRNRRAKRLAQRCQ+MFL LFFKDHS+VVQGLVLSLR+NGFIAYVPAFDAKGPVY+SD DGQVQVDPALLGLPA AG PPSK F +LPACRA  GA ++L STP +  + A  A Y + G        EGGE EEVLEVRPP G GGKVL+L+VLDGVSLR+SC++LPTQARLPKVRFLLAGVGNH +   P                                                                                              AP+ T        +  +  GTR  +                         +R+++GAGRALFGGFVP R APAASLYDFG     A           DGG   +S+L SIY  G GRG+    GGG LETLDDA+VRQYTQEAT RAQRLGAEKRSSRI++SKRQG
Sbjct:    1 MLDALLGLEIGPTTARDGGEATPGEEDQDDITAHGGGGGD--TGEAFSMSARDDVVADSPPFGGAELGRLCTHLNDRNRRAKRLAQRCQEMFLRLFFKDHSQVVQGLVLSLRSNGFIAYVPAFDAKGPVYISDRDGQVQVDPALLGLPAGAGNPPSKAFATLPACRALPGAGVSLVSTPPAGKSNAVSAYYKAGGGXXXGRDGEGGEDEEVLEVRPPRGGGGKVLRLRVLDGVSLRLSCEVLPTQARLPKVRFLLAGVGNHPASHSPA--------------------------------------------------------------------------------------------AAPTGTT------ATTTSARGTRLEH-------------------------QRSEVGAGRALFGGFVPRRHAPAASLYDFGGKGQGAGSEQGGGETGRDGGFAGVSSLPSIYNQGGGRGLVPAGGGGVLETLDDARVRQYTQEATTRAQRLGAEKRSSRITKSKRQG 402          
BLAST of mRNA_S-dermatodea_contig1179.1134.1 vs. uniprot
Match: A0A836CJZ0_9STRA (DIS3-like exonuclease 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJZ0_9STRA)

HSP 1 Score: 381 bits (978), Expect = 2.200e-113
Identity = 298/794 (37.53%), Postives = 372/794 (46.85%), Query Frame = 1
Query:    1 IGVHIADVTRFVEADGPLDKEARVRATTIYLVHRRIDMLPALLSSDLCSLHAGQDRLAVSVVWEAE--EDGEDINICRRADGTPVCWFGRTVIHSEASMTYGQAQSLVEESKIVKPRGHEEPP--PGQAGRDVQEGLQPALAQDLRLLTRFARTTRKERTKNGAIDLSQAGAELKFKIDPVTGTPLAVAGKEESEIHHTIAELMILANGAVAEKIQQTFPSAALVRVHTPPDPSRLTAFEGVAAKVGVGGTGKGGGGLSASLATAESGGFKGEAGKVGLLKSLAVRAMSEAEYVSTD----------LGGDRFGHFGLGLSHYTHFTSPIRRYADVVVHRLLLAAIG---ATPSTVSSERFGNFPAPARLTSGDGRLTFPPGEVGALPPSLAPSVMEMEEAAVGKAEFEAAERRARRAGAGDASFVTNPDGTRTYNKASGTSSATATRATFGGRVPPPPGLEAFPEMATATPTADGDDLLDALLGLDVAGSSGRSGPVEAARAVGGSATSGDFNHTGLDGTPKMSFSEVTAVAAGDGAFGAQGAVGDSMLDALLGLDVGDVSTLGDDEAVPGESLIDGIISGKSFPGEDVTGEQVDAGCAEAGTVGSPPFDGAELGRLCRHLNDRNRRAKRLAQRCQDMFLSLFFKDHSEVVQGLVLSLRANGFIAYVPAFDAKGPVYLSDMDGQVQVDPALLGLPATAGAPPSKGFVSLPACRAFTGASITLASTPASALAGAARYPSSGEGGEGEEVLEVRPPPGTGGKVLKLKVLDGVSLRISCDILPTQARLPKVRFLLA 2331
            +GVHIADV RFV    PLD+EAR R TT YL HRR DMLPALL+ D+CSLH G+DRLAVSV WE E  EDG+         G P  +    VI S A+MTY QA +L     I K R  ++PP  PGQAG  V   L P L+ DL+LLT FAR  R++R+++GA+DL++A  ELKFK+ PVTG P+AV  K E EI+HTIAELMILAN  VAE + + FPSAAL+R H P   SRL   + VAA  G+      GG L ASL  +++   +G AG   LLKSLA R MSEA YV T           + G+R  HFGLG+  YTHFTSPIRRYADVVVHRLLLAA G   A  +  S++                       +  A PP+LA                         AG GD                                                    DGDDL+DALL +                                                                    G D              G+  ++               E V+ G   A      PF   EL R+C HLN R R AK+L+Q+CQ++FL L F +   VV  +V+SL+ANGF+AY+PAFD KGPV+L+D  G VQ+ P LL LPA +G  P++GF  +P CRA   A + L                  EG   E  +EV          +   V   V L ++CD+ P +ARLP +RF LA
Sbjct:  138 VGVHIADVARFVAHGSPLDREARQRGTTTYLSHRRFDMLPALLAGDICSLHGGRDRLAVSVFWEVEQLEDGK---------GLPSQFGQNLVIRSVAAMTYDQAHTL-----ITKGRISDQPPVPPGQAGAPVPPDLHPPLSGDLKLLTLFARWLRQQRSESGALDLTKAEGELKFKLHPVTGLPVAVTAKAELEINHTIAELMILANRTVAETVLRAFPSAALLRTHAPVQASRLGLLQEVAAAAGISVEVGSGGALQASLERSQA--ARG-AGVGALLKSLATRVMSEAVYVCTGTLDEHSAGGGVTGERLSHFGLGIGSYTHFTSPIRRYADVVVHRLLLAATGLGYAAEAAPSADXXXXX-----XXXXXXXXXXETAQEEAAPPALA-------------------------AGLGD---------------------------------------------------LDGDDLIDALLDM--------------------------------------------------------------------GSDXXXXXXXXXXXXXXGDVEVE---------------EGVEVGGDVAVVRKGAPFGTLELARVCEHLNSRTRGAKQLSQQCQELFLRLHFMNRVRVVDAVVMSLKANGFLAYIPAFDTKGPVFLADKSGVVQMAPQLLRLPADSGGEPAQGFAMIPNCRALPHARLVLQ-----------------EGTPQELRVEVEKAA-----AVTFHVPMVVQLYVTCDVQPHKARLPDLRFGLA 728          
BLAST of mRNA_S-dermatodea_contig1179.1134.1 vs. uniprot
Match: A0A7S4R116_9STRA (DIS3-like exonuclease 1 n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4R116_9STRA)

HSP 1 Score: 333 bits (855), Expect = 8.550e-94
Identity = 278/810 (34.32%), Postives = 371/810 (45.80%), Query Frame = 1
Query:    1 IGVHIADVTRFVEADGPLDKEARVRATTIYLVHRRIDMLPALLSSDLCSLHAGQDRLAVSVVWEAEEDGEDINICRRADGTPVCWFGRTVIHSEASMTYGQAQSLVEESKIVKPRGHEEPPPGQ---------AGRDVQEGLQPALAQDLRLLTRFARTTRKERTK-NGAIDLSQA--GAELKFKIDPVTGTPLAVAGKEESEIHHTIAELMILANGAVAEKIQQTFPSAALVRVHTPPDPSRLTAFEGVAAKVGVGGTGKGGGGLSASLATAESGGFKGEAGKVGLLKSLAVRAMSEAEYVSTDLGGDRFG--HFGLGLSHYTHFTSPIRRYADVVVHRLLLAAIGATPSTVSSERFGNFPAPARLTSGDGRLTFPPGEVGALPPSLAPSVMEMEEAAVGKAEFEAAERRARRAGAGDASFVTNPDGTRTYNKASGTSSATATRATFGGRVPPPPGLEAFPEMATATPTADGDDLLDALLGLDVAGSSGRSGPVEAARAVGGSATSGDFNHTGLDGTPKMSFSEVTAVAAGDGAFGAQGAVGDSMLDALLGLDVGDVSTLGDDEAVPGESLIDGIISGKSFPGEDVTGEQVDAGCAEAGTVGSPPFDGAELGRLCRHLNDRNRRAKRLAQRCQDMFLSLFFKDHSEVVQGLVLSLRANGFIAYVPAFDAKGPVYLSDMDGQVQVDPALLGLPATAGAPPSKGFVSLPACRAFTGASITLASTPASALAGAARYPSSGEGGEGEEVLEVRPPPGTGGKVLKLKVLDGVSLRISCDILPTQARLPKVRFLLAGVGNHLSKTKPTKTQRTSD 2388
            +GVHIADV+ FV     LD+EA +R TT YLV RR DMLP++LSSDLCSLH   DRLAVSV+W    D + +            WFGR++IH+ A+MTY QA +++          H +PP            AG  V   L P+L +DL +LT+ AR  RK R +  GA+DLS    G+ELKF +D   G P  V  K E EIHHTIAELMI+ANG VA KI   FPS++L+R H   + +R    E      GV   G+    L+ SL  A++ G  G A    L +SLA RAMSEA+YV T       G  H+GLG+  YTHFTSPIRRYADVVVHRLLLAA+  T    +  R       A L  G  R         ++P S A SV+                       AGD                                     GLE   E    +   +GDDLLD LL                           + +  GLDG                         G + LD           T  DDE    +        GKS   E                  + P+  AE+ ++C  +N +NR +K  +  CQ +FLSL+F+ +++V   +V+ LRANG + YVP +D KGPV+LSD DG VQ+ P+++GLP+ AG PP+ GF  +  C+ F   S  + +                   E  + L+V  P G+       ++LD + +++SCD     AR+P  R  L      +SK K  K  RT++
Sbjct:  204 VGVHIADVSHFVPHHSALDREAMIRGTTFYLVDRRFDMLPSILSSDLCSLHGQVDRLAVSVIWVLSPDLKTVK---------STWFGRSIIHNVAAMTYQQAHNIL----------HNKPPDXXXXXXXXXLTAGSPVDTKLIPSLKKDLTILTKLARILRKNREEIGGAVDLSSGDRGSELKFSLDE-NGLPTKVVAKTEMEIHHTIAELMIMANGHVASKIHGHFPSSSLLRNHRTVEQNRFEDLESAFKAGGVSFDGRSNMALAESLRQAKASGKDG-AVIDSLFQSLATRAMSEAQYVCTGSKEASVGLSHYGLGIEKYTHFTSPIRRYADVVVHRLLLAAV--TKKDDADVRM------ASLDVGVNRNALE-----SIPDSAAMSVL-----------------------AGD-------------------------------------GLEGG-EQKEQSDELEGDDLLDFLLE--------------------------ETSQLGLDGDDDD---------------------GSNKLD----------ETKADDETKETD--------GKSSHAE------------------ADPYSTAEVTKICEGINHQNRISKLCSMSCQRLFLSLYFRGNTDVAPAVVIGLRANGLLVYVPKYDMKGPVFLSDKDGNVQIHPSVMGLPSKAGLPPTSGFAIVDGCKRFPDGSCDICNAD----------------DEANKYLQVIVPAGSSSVHCDFRLLDVIEVQLSCDTSDVVARIPPTRLHL------ISKGKKPKIGRTNE 813          
BLAST of mRNA_S-dermatodea_contig1179.1134.1 vs. uniprot
Match: A0A448Z1J3_9STRA (DIS3-like exonuclease 1 n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z1J3_9STRA)

HSP 1 Score: 290 bits (742), Expect = 4.480e-77
Identity = 254/781 (32.52%), Postives = 346/781 (44.30%), Query Frame = 1
Query:    1 IGVHIADVTRFVEADGPLDKEARVRATTIYLVHRRIDMLPALLSSDLCSLHAGQDRLAVSVVWEAEEDGEDINICRRADGTPVCWFGRTVIHSEASMTYGQAQSLVEESKIVKPRGHEEPPPGQAGRDVQEGLQPALAQDLRLLTRFARTTRKERTK-NGAIDLSQA--GAELKFKIDPVTGTPLAVAGKEESEIHHTIAELMILANGAVAEKIQQTFPSAALVRVHTPPDPSRLTAFEGVAAKVGVGGTGKGGGGLSASLATAESGGFKGEAGKVGLLKSLAVRAMSEAEYVST-DLGGDR-FGHFGLGLSHYTHFTSPIRRYADVVVHRLLLAAIGATPSTVSSERFGNFPAPARLTSGDGRLTFPPGEVGALPPSLAPSVMEMEEAAVGKAEFEAAERRARRAGAGDASFVTNPDGTRTYNKASGTSSATATRATFGGRVPPPPGLEAFPEMATATPTADGDDLLDALLGLDVAGSSGRSGPVEAARAVGGSATSGDFNHTGLDGTPKMSFSEVTAVAAGDGAFGAQGAVGDSMLDALLGLDVGDVSTLGDDEAVPGESLIDGIISGKSFPGEDVTGEQVDAGCAEAGTVGSPPFDGAELGRLCRHLNDRNRRAKRLAQRCQDMFLSLFFKDHSEVVQGLVLSLRANGFIAYVPAFDAKGPVYLSDMDGQVQVDPALLGLPATAGAPPSKGFVSLPACRAFTGASITLASTPASALAGAARYPSSGEGGEGEEVLEVRPPPGTGGKVLKLKVLDGVSLRISCDILPTQARLPKVRFLL 2328
            +GVHIADVT F+  D PLDKEAR RATT YLV RR DMLP++LSSDLCSLH   DRLAVS +W    D + +            W+GRTVI +  +MTY QA +++  +               AG  V       L +DL +LT  +R  RK+R    GA+DLS     +ELKF +D     P+ V  K++ EIH T+AELMI+AN  VA+ I + FP++AL+R+H   D SR    + +     +   G     L+ SL  AE    K  +    L +SLA RAMSEA+YVST  +GG++   H+GLGL  YTHFTSPIRRYADVVVH  LL  +     T+  + F     P R   G GR         +LP S   S+++      G+   +A +R+     A  +S   N D   +  KAS                     +E F  + TA                                                                                    G ++GD  T                                                  ++ ++C+ LN +NR AK  +  CQ +FLSL+FKDH E+ Q +V +LR+NGF AY+P FD + P+YLSD DG VQ+DPALLGL  T+G  P+ GF +  + R F   + TL  +                       LEV     T  K  K+ +LD V+++I CD   T++R+P+ R  L
Sbjct:  573 VGVHIADVTHFLLRDSPLDKEARRRATTFYLVDRRFDMLPSVLSSDLCSLHGDVDRLAVSTIWVMSSDFKTVK---------DFWYGRTVIRNCQAMTYNQAHNILHNNPXXXXXXXXXXXLT-AGYPVNHSNLSXLREDLLILTELSRKLRKDREDIGGAVDLSSGDNSSELKFTLDE-NHNPVQVIPKKQLEIHQTVAELMIMANSWVAKTIFERFPTSALLRIHQSVDESRFEDLKDILDAGKISFDGSSNMKLADSLKKAEKS-CKTNSAVNSLFQSLATRAMSEAQYVSTGQIGGEQGLSHYGLGLGKYTHFTSPIRRYADVVVHHQLLQTL-----TLKXDDF-----PLRAPPGFGRKALK-----SLPESKTISIIQ------GEGIEDAKDRKK----ASTSSVTKNIDSPSSTGKASDIL------------------VEYFSRLTTA------------------------------------------------------------------------------------GKELGDAYT------------------------------------------------NEKVSKICQTLNRQNRMAKLSSFECQGLFLSLYFKDHVEITQAVVTNLRSNGFWAYIPKFDFRAPIYLSDRDGVVQIDPALLGLKKTSGLDPTTGFATSKSTRRFPSGTCTLHDSLE------------------HSHLEVSLRETT--KTYKITILDVVTVKIFCDEWDTKSRVPRPRIHL 1146          
BLAST of mRNA_S-dermatodea_contig1179.1134.1 vs. uniprot
Match: A0A1W0A8G9_9STRA (DIS3-like exonuclease 1 (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A8G9_9STRA)

HSP 1 Score: 261 bits (666), Expect = 6.280e-68
Identity = 166/333 (49.85%), Postives = 200/333 (60.06%), Query Frame = 1
Query:    1 IGVHIADVTRFVEADGPLDKEARVRATTIYLVHRRIDMLPALLSSDLCSLHAGQDRLAVSVVWEAEEDGEDINICRRADGTPVCWFGRTVIHSEASMTYGQAQSLVEESKIVKPRGHEEPPPGQAGRDVQEGLQPALAQDLRLLTRFARTTRKERTKNGAIDLSQAGAELKFKIDPVTGTPLAVAGKEESEIHHTIAELMILANGAVAEKIQQTFPSAALVRVHTPPDPSRLTAFEGVAAKVGVGGTGKGGGGLSASLATAESGGFKGEAGKVGLLKSLAVRAMSEAEYVSTD----LGG-DRFGHFGLGLSHYTHFTSPIRRYADVVVHRLL 984
            +GVHIADV+ FVEAD  LDKEA+ RATT+YLV RR DMLP LLS DLCSLH  +DRLA SV WE  +  E +      D T    F +T++HS A+MTY QA  L+       P  +   P G AG  V   LQP L +DL LLT  AR    +R   GA+DLSQ G ELKF +     +   +  K+  EIH TIAELMILAN  VAE++ + FP  AL+R H PP   R      +A   G+         L +SL   ES     +   + LLKS+A RAMSEAEY+       LG  DRFGH+GLGL++YTHFTSPIRRYADVVVHR L
Sbjct:  526 LGVHIADVSHFVEADSSLDKEAQHRATTVYLVDRRYDMLPVLLSGDLCSLHGRRDRLAFSVFWELNDRLEIL-----PDNTT---FAKTIVHSVAAMTYQQADLLILGLPADDPSSNAVVPEGTAGHPVDGELQPLLKKDLTLLTAIARGLYAKRAAGGAVDLSQRG-ELKFSLSGENESDWKIGVKQALEIHSTIAELMILANSTVAERLVRFFPETALLRRHVPPSGDRFEQLLTLATTQGLTLDTTSNMTLQSSLVRIES---TVDEDTMALLKSMATRAMSEAEYICASQAQALGNQDRFGHYGLGLTYYTHFTSPIRRYADVVVHRQL 846          
BLAST of mRNA_S-dermatodea_contig1179.1134.1 vs. uniprot
Match: A0A1E7FX94_9STRA (DIS3-like exonuclease 1 (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FX94_9STRA)

HSP 1 Score: 246 bits (629), Expect = 3.790e-66
Identity = 159/334 (47.60%), Postives = 200/334 (59.88%), Query Frame = 1
Query:    1 IGVHIADVTRFVEADGPLDKEARVRATTIYLVHRRIDMLPALLSSDLCSLHAGQDRLAVSVVWEAEEDGEDINICRRADGTPVCWFGRTVIHSEASMTYGQAQSLVEESKIVKPRGHEEPPPGQAGRDVQEGLQPALAQDLRLLTRFARTTRKERTK-NGAIDLSQA--GAELKFKIDPVTGTPLAVAGKEESEIHHTIAELMILANGAVAEKIQQTFPSAALVRVHTPPDPSRLTAFEGVAAKVGVGGTGKGGGGLSASLATAESGGFKGEAGKVGLLKSLAVRAMSEAEYVST-DLGGDR-FGHFGLGLSHYTHFTSPIRRYADVVVHRLLL 987
            +GVHIADVT F+  D PLDKEA+ RATT YLV RR DMLP++LS +LCSLH   +RLAVS +W    D + +            W+GRTVI +  +MTY QA +++       P     PPP  AG  V      +L  DL LLT+ AR  RK+R    GA+DLS    G ELKF +D     P+ V  K++ EIH T+AELMI+AN  VA  I +TFP++AL+R+H   D SR    + +     +   G     L+ SL  AE    K  +    L +SLA RAMSEA+YVST D+GG+    H+GLGL  YTHFTSPIRRYADVVVHR LL
Sbjct:  311 VGVHIADVTYFLPHDSPLDKEAQRRATTFYLVDRRFDMLPSVLSGNLCSLHGNMERLAVSTIWTMSSDFKVVK---------DFWYGRTVIRNCQAMTYDQAHNILHNLPPDDP-SKPHPPPLTAGYPVTRSNNESLKGDLSLLTKLARKLRKDREDIGGAVDLSSGDQGNELKFSLDG-NHQPVKVTPKKQLEIHQTVAELMIMANSWVARTIFETFPNSALLRIHQSVDESRFEDLKEILDAGKITFDGSSNMKLADSLKKAERS-SKSNSAVNSLFQSLATRAMSEAQYVSTGDVGGENNLSHYGLGLGKYTHFTSPIRRYADVVVHRQLL 632          
BLAST of mRNA_S-dermatodea_contig1179.1134.1 vs. uniprot
Match: A0A067CUY6_SAPPC (DIS3-like exonuclease 1 n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CUY6_SAPPC)

HSP 1 Score: 255 bits (652), Expect = 6.060e-66
Identity = 176/382 (46.07%), Postives = 213/382 (55.76%), Query Frame = 1
Query:    1 IGVHIADVTRFVEADGPLDKEARVRATTIYLVHRRIDMLPALLSSDLCSLHAGQDRLAVSVVWEAEEDGEDINICRRADGTPVCWFGRTVIHSEASMTYGQAQSLVEESKIVKPRGHEEPPPGQAGRDVQEGLQPALAQDLRLLTRFARTTRKERTKNGAIDLSQAGAELKFKIDPVTGT-PLAVAGKEESEIHHTIAELMILANGAVAEKIQQTFPSAALVRVHTPPDPSRLTAFEGVAAKVGVGGTGKGGGGLSASL-ATAESGGFKGEAGKVGLLKSLAVRAMSEAEYVSTDLGGDRFGHFGLGLSHYTHFTSPIRRYADVVVHRLLLAAIGATPSTVSSERFGNFPAPARLTSGDGRLTFPPGEVGALPPSLAPSVME 1140
            +GVHIADV  FV  D  LDK+AR RATT+YLV RR DMLP LLS DLCSLH   DRLA SV WE + D   + I           F +T++H+ A+MTYGQA  L+ +     P   +    G AGR +   LQP L  DL+LL    R    +R   GA+DL+Q+G ELKF I   TG     V  KE  EIH TIAELMILAN  VA ++   FP  ALVR H PP   R  +   +AA   +         L ASL A A S     +A  + LLKS+A RAMSEAEY+        F H+GLGLSHYTHFTSPIRRYAD+VVHR LLA +  T +T  + +      P R  +              LP SL PSV++
Sbjct:  521 LGVHIADVGHFVPFDSALDKDARHRATTVYLVDRRFDMLPVLLSGDLCSLHGQTDRLAFSVFWELDAD---LRILPHRTT-----FAKTIVHNVAAMTYGQADRLLSDLPANDPLDTKVVGEGTAGRPIASHLQPMLRDDLKLLRAIGRRLYAQRAATGAVDLTQSG-ELKFMI---TGEFDWRVEIKESLEIHGTIAELMILANATVATRLVDCFPKTALVRRHVPPSGDRFKSLLALAATQQLSLDTTSNMTLQASLDAVATSV----DADTLALLKSMATRAMSEAEYIVASEAVGGFAHYGLGLSHYTHFTSPIRRYADLVVHRQLLATLAPTTTTAVATK------PVRAVASL-----------VLPASLTPSVLD 869          
BLAST of mRNA_S-dermatodea_contig1179.1134.1 vs. uniprot
Match: A0A485L742_9STRA (DIS3-like exonuclease 1 n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L742_9STRA)

HSP 1 Score: 254 bits (648), Expect = 2.390e-65
Identity = 166/360 (46.11%), Postives = 210/360 (58.33%), Query Frame = 1
Query:    1 IGVHIADVTRFVEADGPLDKEARVRATTIYLVHRRIDMLPALLSSDLCSLHAGQDRLAVSVVWEAEEDGEDINICRRADGTPVCWFGRTVIHSEASMTYGQAQSLVEESKIVKPRGHEEPPPGQAGRDVQEGLQPALAQDLRLLTRFARTTRKERTKNGAIDLSQAGAELKFKIDPVTGTPLAVAGKEESEIHHTIAELMILANGAVAEKIQQTFPSAALVRVHTPPDPSRLTAFEGVAAKVGVGGTGKGGGGLSASLATAESGGFKGEAGKVGLLKSLAVRAMSEAEYV-STDLGGD--RFGHFGLGLSHYTHFTSPIRRYADVVVHRLLLAAIGA----TPSTVSSERFGNFPAPARL 1059
            +GVHIADV  FV  D  LD EA+ RATT+YLV RR DMLP LLS DLCS+H  +DRLA SV WE +     I       G    WFG+T++HS A+MTYGQA  L++      P        G AG+ +   L+ AL +DL +L    RT  + R   GA+DL+Q G ELKF         L V  K   EIH TIAELMILAN  VA+++ +TFP +A++R H PP  +R  A   +AA  G+         L  SL        + E   + LLKS+A RAMSEAEY+ +++  G   RFGH+GLGL  YTHFTSPIRRYADVVVHR L A++ A    T +T+++ R      PA L
Sbjct:  566 LGVHIADVGYFVAPDSALDLEAQNRATTVYLVDRRYDMLPVLLSGDLCSIHCARDRLAFSVFWELDATSLAI-----VGGKT--WFGKTILHSVAAMTYGQADRLLDGLSADDPAIPNVVGVGTAGQPIAAALESALREDLVVLRAIGRTLYRGRALQGAVDLTQGG-ELKFST--TDDGELRVGTKAALEIHSTIAELMILANSTVAQRLVETFPQSAMLRRHVPPSGNRFDALIALAATQGISLDTSSNMALQQSLDIVRD---RVEPDTLALLKSMATRAMSEAEYICASEATGTALRFGHYGLGLEFYTHFTSPIRRYADVVVHRQLFASLHAGERTTATTLTTTRTTGVKLPASL 912          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1179.1134.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JSW4_9PHAE6.300e-29352.61DIS3-like exonuclease 1 n=1 Tax=Ectocarpus sp. CCA... [more]
D8LN43_ECTSI1.240e-18771.83DIS3-like exonuclease 1 n=1 Tax=Ectocarpus silicul... [more]
D8LN42_ECTSI6.160e-11948.96Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CJZ0_9STRA2.200e-11337.53DIS3-like exonuclease 1 n=1 Tax=Tribonema minus Ta... [more]
A0A7S4R116_9STRA8.550e-9434.32DIS3-like exonuclease 1 n=2 Tax=Ditylum brightwell... [more]
A0A448Z1J3_9STRA4.480e-7732.52DIS3-like exonuclease 1 n=1 Tax=Pseudo-nitzschia m... [more]
A0A1W0A8G9_9STRA6.280e-6849.85DIS3-like exonuclease 1 (Fragment) n=1 Tax=Thraust... [more]
A0A1E7FX94_9STRA3.790e-6647.60DIS3-like exonuclease 1 (Fragment) n=1 Tax=Fragila... [more]
A0A067CUY6_SAPPC6.060e-6646.07DIS3-like exonuclease 1 n=2 Tax=Saprolegnia TaxID=... [more]
A0A485L742_9STRA2.390e-6546.11DIS3-like exonuclease 1 n=1 Tax=Aphanomyces stella... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig1179contigS-dermatodea_contig1179:9234..22446 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score530.8
Seed ortholog evalue1.4e-147
Seed eggNOG ortholog2880.D8LN43
Preferred nameDIS3L
KEGG koko:K12585,ko:K18681
KEGG Pathwayko03018,map03018
KEGG ModuleM00391
GOsGO:0000175,GO:0000177,GO:0000178,GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0004532,GO:0004540,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005813,GO:0005815,GO:0005829,GO:0005856,GO:0005886,GO:0006139,GO:0006364,GO:0006396,GO:0006401,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008408,GO:0009056,GO:0009057,GO:0009987,GO:0010467,GO:0015630,GO:0016020,GO:0016070,GO:0016072,GO:0016075,GO:0016787,GO:0016788,GO:0016796,GO:0016896,GO:0019439,GO:0019899,GO:0022613,GO:0032991,GO:0034470,GO:0034641,GO:0034655,GO:0034660,GO:0034661,GO:0042254,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044422,GO:0044424,GO:0044430,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0046700,GO:0071704,GO:0071840,GO:0071944,GO:0090304,GO:0090305,GO:0090501,GO:0090503,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1902494,GO:1905354
EggNOG free text desc.3'-5'-exoribonuclease activity
EggNOG OGsCOG0557@1,KOG2102@2759
Ec32 ortholog descriptionRrp44 is a component of the exosome 3'->5' exoribonuclease complex, a complex that degrades mRNAs.
Ec32 orthologEc-05_003410.1
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03019
Hectar predicted targeting categoryother localisation
Exons14
Model size3744
Cds size2982
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig1179.1134.1prot_S-dermatodea_contig1179.1134.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig1179 9885..22335 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924217.8183835-UTR-S-dermatodea_contig1179:9233..98841622924217.8183835-UTR-S-dermatodea_contig1179:9233..9884Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig1179 9234..9884 -
1694079100.5574431-UTR-S-dermatodea_contig1179:9233..98841694079100.5574431-UTR-S-dermatodea_contig1179:9233..9884Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig1179 9234..9884 -
1622924217.990715-UTR-S-dermatodea_contig1179:22335..224461622924217.990715-UTR-S-dermatodea_contig1179:22335..22446Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig1179 22336..22446 -
1694079100.7041483-UTR-S-dermatodea_contig1179:22335..224461694079100.7041483-UTR-S-dermatodea_contig1179:22335..22446Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig1179 22336..22446 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924217.833485-CDS-S-dermatodea_contig1179:9884..107061622924217.833485-CDS-S-dermatodea_contig1179:9884..10706Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1179 9885..10706 -
1694079100.5731182-CDS-S-dermatodea_contig1179:9884..107061694079100.5731182-CDS-S-dermatodea_contig1179:9884..10706Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1179 9885..10706 -
1622924217.841546-CDS-S-dermatodea_contig1179:11059..113201622924217.841546-CDS-S-dermatodea_contig1179:11059..11320Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1179 11060..11320 -
1694079100.5810971-CDS-S-dermatodea_contig1179:11059..113201694079100.5810971-CDS-S-dermatodea_contig1179:11059..11320Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1179 11060..11320 -
1622924217.8536706-CDS-S-dermatodea_contig1179:11882..120051622924217.8536706-CDS-S-dermatodea_contig1179:11882..12005Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1179 11883..12005 -
1694079100.5889893-CDS-S-dermatodea_contig1179:11882..120051694079100.5889893-CDS-S-dermatodea_contig1179:11882..12005Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1179 11883..12005 -
1622924217.8629637-CDS-S-dermatodea_contig1179:13345..134801622924217.8629637-CDS-S-dermatodea_contig1179:13345..13480Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1179 13346..13480 -
1694079100.6001353-CDS-S-dermatodea_contig1179:13345..134801694079100.6001353-CDS-S-dermatodea_contig1179:13345..13480Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1179 13346..13480 -
1622924217.8736458-CDS-S-dermatodea_contig1179:13558..140401622924217.8736458-CDS-S-dermatodea_contig1179:13558..14040Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1179 13559..14040 -
1694079100.6081407-CDS-S-dermatodea_contig1179:13558..140401694079100.6081407-CDS-S-dermatodea_contig1179:13558..14040Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1179 13559..14040 -
1622924217.8864315-CDS-S-dermatodea_contig1179:14938..150591622924217.8864315-CDS-S-dermatodea_contig1179:14938..15059Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1179 14939..15059 -
1694079100.6160765-CDS-S-dermatodea_contig1179:14938..150591694079100.6160765-CDS-S-dermatodea_contig1179:14938..15059Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1179 14939..15059 -
1622924217.8965998-CDS-S-dermatodea_contig1179:15359..154631622924217.8965998-CDS-S-dermatodea_contig1179:15359..15463Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1179 15360..15463 -
1694079100.623947-CDS-S-dermatodea_contig1179:15359..154631694079100.623947-CDS-S-dermatodea_contig1179:15359..15463Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1179 15360..15463 -
1622924217.9072037-CDS-S-dermatodea_contig1179:15942..161101622924217.9072037-CDS-S-dermatodea_contig1179:15942..16110Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1179 15943..16110 -
1694079100.631821-CDS-S-dermatodea_contig1179:15942..161101694079100.631821-CDS-S-dermatodea_contig1179:15942..16110Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1179 15943..16110 -
1622924217.9170477-CDS-S-dermatodea_contig1179:16637..167571622924217.9170477-CDS-S-dermatodea_contig1179:16637..16757Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1179 16638..16757 -
1694079100.639671-CDS-S-dermatodea_contig1179:16637..167571694079100.639671-CDS-S-dermatodea_contig1179:16637..16757Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1179 16638..16757 -
1622924217.9306297-CDS-S-dermatodea_contig1179:18108..183301622924217.9306297-CDS-S-dermatodea_contig1179:18108..18330Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1179 18109..18330 -
1694079100.6474698-CDS-S-dermatodea_contig1179:18108..183301694079100.6474698-CDS-S-dermatodea_contig1179:18108..18330Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1179 18109..18330 -
1622924217.9444404-CDS-S-dermatodea_contig1179:19698..197871622924217.9444404-CDS-S-dermatodea_contig1179:19698..19787Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1179 19699..19787 -
1694079100.6627686-CDS-S-dermatodea_contig1179:19698..197871694079100.6627686-CDS-S-dermatodea_contig1179:19698..19787Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1179 19699..19787 -
1622924217.953718-CDS-S-dermatodea_contig1179:20100..202431622924217.953718-CDS-S-dermatodea_contig1179:20100..20243Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1179 20101..20243 -
1694079100.674143-CDS-S-dermatodea_contig1179:20100..202431694079100.674143-CDS-S-dermatodea_contig1179:20100..20243Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1179 20101..20243 -
1622924217.9682174-CDS-S-dermatodea_contig1179:20805..208781622924217.9682174-CDS-S-dermatodea_contig1179:20805..20878Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1179 20806..20878 -
1694079100.6824555-CDS-S-dermatodea_contig1179:20805..208781694079100.6824555-CDS-S-dermatodea_contig1179:20805..20878Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1179 20806..20878 -
1622924217.9800918-CDS-S-dermatodea_contig1179:22216..223351622924217.9800918-CDS-S-dermatodea_contig1179:22216..22335Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1179 22217..22335 -
1694079100.690457-CDS-S-dermatodea_contig1179:22216..223351694079100.690457-CDS-S-dermatodea_contig1179:22216..22335Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1179 22217..22335 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig1179.1134.1

>prot_S-dermatodea_contig1179.1134.1 ID=prot_S-dermatodea_contig1179.1134.1|Name=mRNA_S-dermatodea_contig1179.1134.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=994bp
MLPALLSSDLCSLHAGQDRLAVSVVWEAEEDGEDINICRRADGTPVCWFG
RTVIHSEASMTYGQAQSLVEESKIVKPRGHEEPPPGQAGRDVQEGLQPAL
AQDLRLLTRFARTTRKERTKNGAIDLSQAGAELKFKIDPVTGTPLAVAGK
EESEIHHTIAELMILANGAVAEKIQQTFPSAALVRVHTPPDPSRLTAFEG
VAAKVGVGGTGKGGGGLSASLATAESGGFKGEAGKVGLLKSLAVRAMSEA
EYVSTDLGGDRFGHFGLGLSHYTHFTSPIRRYADVVVHRLLLAAIGATPS
TVSSERFGNFPAPARLTSGDGRLTFPPGEVGALPPSLAPSVMEMEEAAVG
KAEFEAAERRARRAGAGDASFVTNPDGTRTYNKASGTSSATATRATFGGR
VPPPPGLEAFPEMATATPTADGDDLLDALLGLDVAGSSGRSGPVEAARAV
GGSATSGDFNHTGLDGTPKMSFSEVTAVAAGDGAFGAQGAVGDSMLDALL
GLDVGDVSTLGDDEAVPGESLIDGIISGKSFPGEDVTGEQVDAGCAEAGT
VGSPPFDGAELGRLCRHLNDRNRRAKRLAQRCQDMFLSLFFKDHSEVVQG
LVLSLRANGFIAYVPAFDAKGPVYLSDMDGQVQVDPALLGLPATAGAPPS
KGFVSLPACRAFTGASITLASTPASALAGAARYPSSGEGGEGEEVLEVRP
PPGTGGKVLKLKVLDGVSLRISCDILPTQARLPKVRFLLAGVGNHLSKTK
PTKTQRTSDAGASKVPSAQAHEFHRTKGGRDHILPSPSDQADIDADGSRV
AVLDGGGASGTRGGGGLYRILQGTLDNALRTDPVSTRHDSDVDIVAPSST
LPHGPGLGSHPNKLGTRAGNIGAGNEPVPEKQKRGKKKASPAKATERADI
GAGRALFGGFVPSREAPAASLYDFGDSSSRADGGLSALGSIYGNGAGRGI
GGGTLETLDDAKVRQYTQEATVRAQRLGAEKRSSRISRSKRQG*
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mRNA from alignment at S-dermatodea_contig1179:9234..22446-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig1179.1134.1 ID=mRNA_S-dermatodea_contig1179.1134.1|Name=mRNA_S-dermatodea_contig1179.1134.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=13213bp|location=Sequence derived from alignment at S-dermatodea_contig1179:9234..22446- (Saccorhiza dermatodea SderLu1190fm monoicous)
ATCGGAGTGCACATCGCTGACGTCACCCGGTTCGTGGAGGCCGACGGCCC TTTGGACAAGGAGGCGAGGGTGAGGGCCACGACGATCTACTTGGTCCACC GCCGCATCGACATGCTCCCGGCGCTCCTGTCGTCTGATCTCTGCTCTCTC CACGCCGGGCAAGACAGGCTCGCGGTCTCGGTAGTCTGGGAGGCCGAGGA AGACGGGGAGGACATCAACATCTGCAGGAGGTGAGCGCGCGACTACATGG AAAGCGCGGCAAGGATTTCGCGTTGATGGTTGGACGCATTCGGGCAGACT ATCGTAGACTTTATCGAAGATTCTTTGAAGCAGACGTTTTTTGACGCTGC GGGTGCTACTATAATACATGGGAAGGGAAGCAAGGGTTTGGCGTTGATGA TTGGATGTGTCCGGGTAATCTATAGTAAAATTCTTGCAAGGTAAACTTTG AAAACAAAACTTCATATTTGACGCTGCGGGCGTGGTGGTGGTGATGCGGT CAGTGGTGTGGAACATAAAAAATAACGTGAAGTGCGCCAGGAGGCACACA AACGGGTCTTGTAGCTTGGTCGTTCGGGCTCGCGCTCGGGTTGGAGTTCC TGGTAGCTGCGAAGGAGACTGTATAGAACAGGCAGCCTCTTGCTTGTGGT GAACGGGTTTATCGTACTGGTTTGTGTGGGTTGCTTGGCCGAGAAGGATG TTGAGGGCGTCAGGTTTTGTGATCCGAGCGTTGTTTGGGGTTGACGGTAT AGCCGCTCTATCGCCAGCTGAGCGATGGGTTTTGGCCCGTGGTTAGCTGT CTAGGAATAATAATCTCCCATATATAGTTTGGTTGGAAGGATGCCGGGTG CCGCAGGAGGGTAGACGTGAAGCTAAGCTTGCCTTCTGTGGTTGGTTCCA TATTGTTTCTGGTACACCCTACATAAATTGGCTCTCTAGCTACACGGCGC CCCGAAGGGAGTCCCTGTCACCATTCAACTCGAACTGTTCGTCCTTTGGC TGGTTGCATATCCTTCCTGTGGTAGTCTACTTGTTACAAAGTATTGTGCT TGTAGGCGACATGATGCGGCGTAGGACCGAGTACCTCTCTTCATTCTGGC GTCGATAGTCGTGTGACACTTACTCCAGGGGACCCATGCGCGTACGCTTT CCTAGCCGCGTGCAATTGACTACCATGGAGTCTCCGTCATAGCTGGGGCG CTGATGGCCGTGCGTGGCGTGCCTGCTAGGCGAAGACACTGAAATGGGCG GGGGAAAAAACGACAAGACATACACGTCTCTGGCGCGGTGGTCTACGGAT GCACGCACCGCACCGCCCAACCGCCTGCCCTAGTAAAAATAGGCGCGATG CTTAGGCCGTCTCCAAAAGTGCAGGAATACGTCGAAGTTTCAACTCGTTT GTGTTTGTATCCTTAAGCCATCTGTGGTGCCACCAGCCGTGGAACATTGT GCTGCCACGCGCCGCTTCTCCCATGTCCGAGAGGCCAGTTGTTCGTTACA ACGGCTCTTCGCCTGTTCTCCACTTGACGTATGCGTATGCATGTCGTGCT TGTTTTGTTCCGTGCCAGGGCCGACGGGACCCCTGTGTGCTGGTTTGGGA GGACCGTAATCCACTCCGAGGCTTCCATGACGTACGGCCAGGTACAGCGC CGTTCGATTACTACTCTTTTTTTCTCCTGACGCGTGGCCGATTGAAAGTC GTCCAGTCATTTAACGTTGGCCAGCCGAGAGAGCAGACGCCTATTGTCGG CATACATTTCAAACGTCTATAATGCAAGAGGGGGATAACTACATACTTCG AAGTATGATGTTGTTGCATCACGCTCGGCGTTCTTCCTTGCAGTACCCTG TGTCGCTGTTGATTAGCCTCGGCGCGCGTAAGAAATAATGTTTATCATAT CGTCGTGTTCAGGATTTGGGCCGATTCTGGACGGATCGTGTTCCCCCGGC TACTATTAATAGTGCAGTCCCAGGCTGGCACAACGAGTCGTGTCTACGCG CGGCACGCATTTCAGGCGAAGTATGGCTTTCAGTCGTTGCAGCTCGTTTG GGTGCATTCGATCGGGTCAACAAATAATCCCACAAGCTGCACGGTCTGCC GACCAACTTACGAATAAATTATACATTTGAGCTACGTTTAACGATCGATG TGTCTGCCCTCCGTCAAACCGTGATGGCTCACTCATGTTTTTCGCTCGCG CAGGCTCAGAGCCTGGTGGAAGAAAGCAAGATCGTCAAACCCCGAGGACA CGAGGAGCCCCCTCCCGGCCAAGCCGGACGAGATGTCCAAGAAGGCCTCC AGCCCGCCTTGGCGCAAGACTTGCGGCTGCTCACACGTTTCGCTAGGTTC GTGATGGGTGCTGTATGATAGCGGGATGTAATCAGTCCGTCGCGATCACC ACCTGTGTAACGGTATCATTATTCCTTTTGCCAGTGCGTGTTGTAGGTAA TCCAATTGAATCATTCCTGTTCGATTGCAGCGTATGTGACGGGGTGGGTC ATCATTCCTCCCCCATATAGTTGTGCTAGGTAGTCGAAGGAACAGTTCCT CTGCGACCGCGACGTATTTTTATACTCGAGATCGTTATTCCTCTACCATT GCAACATGAATGATGTATGGTAAATGTTTCGGTCCACTGACCGGTCGCTT TTTTGACAGGACGACGAGGAAGGAGCGTACGAAAAACGGCGCGATCGACT TGTCCCAGGCCGGCGCCGAGCTGAAGTTCAAGATTGACCCTGTCACGGGT AAGACGGGGAGAAAAGCCAAATCCGCACGCGCTTGCTTGGTTTCCCCTGA GGACAGTAAATATGTATATACACAGAACTAGGATTGGAATCTTTTGGTAG AGGAAAAATATGGCCGAATCTAACTCAGCGGGAGCCTAGTTATACGATAT GATGCTATCGTGCACATTACAATTAAGAGGAAACTCTGGGAATTTACCCG TTTTTACTTGTGATTTTGTTTTTGTCAACTTGTACTCGAGCCTGTTCTAC CCACCCTTCTTTGCGCATCCGCTTGGTTGCTTCCCCCTGGGCTACCGCAT TCATTTATGGTGCTCGTGGTTCTCGGTGCGTTTCTTTTTTCTTTTAAGGC GTTTGTTTTTGTGTAACGGTTGCCAGACTCGATTACGATATCGTGGGGGC GATTAGCGTTTCCTTTAGGAGAGGGGGCCGTTTTTGTTTTGGCAGGCAGT CCCAAGTTTTGAGGCATGTCATGTCCCCTCTGTTTCCGAGATAGTTTGTT TCAATTCCTTCTTATTGTGTACCGTGCTATATAGATAATTCCGTAGGGGT TTTTGGATCTTTCGATTTCTCATCCGACCACGACTGGGATGGGCAACCGC TATTAATAGTATTAATAGTATTATTAGTTGGCCGGTCGGTTGTAAGTGTC ATAACCAATGCAATGTACAGCTCTTAACCCTAGCTCTAACCTTGCAGTTT TTGGGTGGATGTAAAATGAAGCAATATTGTGGTACTGTATGCGTAGTCGC TTTTGTCGGAGGCTTTATCGGTGAACGTCTGTATGCCATGAGGGTGACGA AATGCAGGCAGTCGATAGACCTCGTGACGGTCAGGACGGCCAAACACGTG AAACCGAAACCGTCACGCGCTGACATACTGACCCTGCAGTTTTCAGTACA CAGGCGGCACGGCCTTGCGGTAGTACTATTAATAGTGACAAATCAAGGAT TAGTGTTGCGGTCGCTTTCGTCGGAGGTTAAATCAAGCCCGTAACGGCAT TTCATGGGATGACGAAATTGCGGGTAGCCCCTTCGGCAAGCGGGGCAAGC AAGTAACCCACTGTGCTCGGTGCATAGACAGTTACGGTCCTGCTGCCTCG GCCATGGGTGAAGGATCCTCCGGGTTGTCGCTTGAAGTCTACCGTAGATC GTTGCCTTTATCATACGATTTCTGATTCAGGGTCCGCTCCTACTTCTGAG TTGGTTCGTGCGGGACGAAAACGATTCTCCGCGCTTGGGAATGTCACATG CTCCGAAAACGCGCGAAGCAGGTCACCACCATCGCCAAACGTATCCGCGA TTTGAAACGATTCACAGTGTACTCCTCCAGAGCATGAACACGGAATTATG GATGCTGTTTTCGCAGGCACACCGCTCGCTGTAGCCGGCAAGGAAGAATC CGAGATTCACCACACCATCGCGGAGCTCATGATCCTCGCCAACGGCGCCG TCGCCGAGAAAATTCAGCAAACGTTCCCGTCGGCGGCCCTAGTCCGCGTG CATACCCCGCCCGACCCCTCGAGACTCACGGCATTCGAAGGCGTGGCGGC TAAAGTAGGGGTAGGCGGCACAGGCAAGGGCGGAGGCGGTGCCAAAGGTG AGTTTTGTTTTACGCCTGGAGTAAGATGATCTTTTAAATGTTTCTATTAC GGAGGTACACACTAATCTGGACCAGATTTCAGTACCGTGAATACCAAATA TTCCGACCATGAAAACCCAAAACAACAAAAATCTCACGAAAAACAAAAAG ACACGAGATGTGGCCATACACAAGAACACGGACCTTGAAATATCGCTAAT TCCAGCGTATTTCGACTTCTCTAGGTTGAGACTTGTGGAAAATTTGGACC GGTTAACTATGGTATCGTCCCCCGTAATGTTAATAGTGTAATTTCCGTGC GAGGCATCAGCGCGAGGCTAACGTTTTGACAAACAAACTCTCCCAAGCTA AAGTAAACTTGTTCTTCTTGCTCTATCTGGCGGCGAGGGCCGGCGTGCGT AGTGAAGCTCTGCAGAAGCGGAGGTATCGAATAGGAGTAAATTAATGAAT GCCCTTTTTTCCCGTCTTCTATGCCGTGTTTTTGGGAGGGACTCGGGATG CAAAAATTACTTGATTTATGTGCGCAGTGACGGCCCCGACAGTGTGCCGG TTTGATTATTTACCGCGTTGTTTAGGGTACACTATAGCCAGCAAAAATTC GGCTCCTCTACTACCGTGCATAATATTTAGTAGTTTCTCGCCTTTGTCCC GTGAGGATACATCGTCTTCGACGCTTTTTCAGAGACGCCTTCGCTGTTCA CAAGCTATTTTCTTTGGGGATAGATACGAACTGCTTGTTTCAGTCTCGAT TCTCTCGTTACTAAGGTTTAGGATAACATCACCGCGCAGGAAAGGGAGCA CGCCGAAGCGATGCGCGATATATGTGTTTCTCGAGTATACGCGCTAAATT GTCTGACGTGCGAGAACGTTTGTCCTGAGTTGTCGTGCGGCGGGGTGGTT GAGTGGAATCACCGAACTTGGCTCGATCGTGGCGCGTTCATCGAGCGTAG CACCGGGAAGCTCGCCGCGCGATGGATCGATCGTGTAACGGCTGTATCAT TGGCAGGTACGCGGTGAAGCAGCATACCAACCCCAAGGCGTATTTCCGAA ACTCGCTATGATATATTGCTTCGAGTATCTGCGAGTCTAGGCTTCGTTGA AACAGCATGTTGGAACACAGCGCCCATGTACAGATACATCAAAGGGTCAG GTGAGAAAATCTCCGCCGCCTTGGCCGTCGAGGGGTGACTGTGCAGAGGT ATGCTTGATGTTCATCCCACGAACTCGAGACCAAACCATTTTTCCGATGT ATTGAAAACCGTTAGCACTGCTCCTTCAACTTGCCCGATTCTCAACCTTC GTCCGACCTTCGTGCCCGCGTTTTGTTTCGTATGAGAAGGTCTGTCGGCG AGCCTTGCGACGGCGGAGAGCGGCGGCTTCAAGGGTGAAGCTGGCAAGGT GGGCCTGCTCAAGTCCCTCGCCGTTCGAGCCATGTCTGAGGCGGAGTACG TGTCCACCGGTACTCTATCGGACCACCAGGCGGACGGGAAAGGTGCTGTG CTTTTGTATTTCACAGGTCATCTTCCGTTGAGTGGAACGGCAGCTCGTCG CGTCGTGCGTGAGGCTGGCATTTGTTCATATGTGTATATGGTACGTATCG CCTGAATTATTTGGAGTCGGATGGCGTTGTTCATTGGATTCGGTAAAACG ACAGCTAGCTCGCCAATTCATGCGTTAAAGTTGTTTTGGAGCTTCATTAT ATCGAAGCTCTTGCCCGTGTTTTCTCTTCGTCTATTGCATATGGGTGTGC TTCGTAGACCACACCGGGGGTTGCAGAGTCTTTTTCGATGCTGTAACGTT ACTTGTTTGGGTCCCACCCAGATTTTTAGGGGAAGAAACGGGTCCGTAGA GGCTCATTGCAATCAAACACGGGTCCATGATCGGCCGATCGATTATCGCA CCCAAAAGCGTTAATTTTTGAAACGCGATGACCAGCATTTCAAGGCTAAA CTATAACCGCGATCGATGCGTTCTGATGCGCGGCAGATCTCGGGGGGGAC CGTTTTGGGCACTTCGGTCTAGGACTCTCCCACTACACGCACTTCACCAG TCCCATCCGAAGATACGCCGACGTCGTGGTCCACCGTCTCTTGCTGGCCG CCATTGGCGCGACACCTTCAACTGTGAGTTCGGAAAGGTTTGGGAATTTT CCCGGTGGGTTTCGTGTAGTGCGACCCCTGCGAGTCGCTTGACGGGAGTC CATAATCTCCCTCAGGTTATCTCTCAGCTCTAGAAATTTGTGGCCGACGT TTCATTGGGTTTGGTTCGGCGTCGACAGTGATGTGCGCACATTCTTGCTT GAGTCTTCTCTGGCAGTCGCTTTTCGCGTGGGCGGATTTGAAACGCGCCC GAGGTTTCGTTGTGATGCTTATCCCTTGTTGTCGTACTACATAGCGGCGG ATGTGGCACGTGCACCACTCTTGTGTAGCTCGTTGATGCGTCTGCACGGC GCGCCTCGAATCCTTGCTGCTCGTTGCCAGTTTCCCGGCTTTTTCAAGAT AGAATAAACCGAAAAATCGCTTGCCGCGGAGTGCGCGTCTACGGATAGGT GCACATGTACCTGCCATGTTTTTTTCAACTAATCAGTGGCTGAATCTCAT GTGGACCACGCTACCCCCCCCCGAAGGCACCAGCGCCGGCGCGGCTTACA AGCGGGGACGGCCGCCTGACATTCCCTCCCGGAGAAGTGGGCGCTCTGCC CCCATCGTTGGCCCCTTCGGTGATGGAAATGGAAGAGGTGAGCCTAGAAG TCAGTAGTAGCCCGACCGGGGGGTGCATGGATGATGCGGAAACGAGGGCC TGATTCGCACTTGTCAAGGGACCAATCGACACCATCGTAAAGAGGAATCG GTTTCCATGCTCCGCACCCCCAACTGCACGTAACAGTTCAGAATGTTGTT CCTCAAAGTAATCTACGAATTGCCCCTCACCCCTCTGGGCGTCTAGGGTC GACGGTAGAGTGTGCCTCGATTCCAACAGTCCTCTGTTGTGCGCCCACTC TCCCCCCTTCCGTCCCTAACACTGTTGGGCGGTACAGGCCGCCGTGGGGA AAGCGGAGTTTGAGGCGGCGGAAAGGCGTGCTCGGAGAGCCGGGGCAGGG GACGCGTCGTTTGTCACTAATCCCGATGGGACACGAACGTACAACAAGGC GAGCGGCAGTACGAGAGCAACCTACCCTTAAATACGTCTAGCACACCATT TATCGTATGTAATCAGGTGGACCAGGGAAAGCCCAGCTCCCCGGCGTTTT GGTCTATTTGTTGGTGTTTTTCTCGAGAGGCGAACGACGTTCGGATGATC AGAGGGGGGGTCGTGGAATTTCCCCCGATTTCGCTCGTGTTGCATTCGCC CTATTCATTTAACAGAGTGCACGGTGCAGCCTGTGCTGTTTGCCTCCCCG TGCTCCGCTCTCTGACATGTGCCAGATGTCGAAAATATTCGGTCAGGAAT GTCTGCGTGATGCGGTCTTGAACTATTCCGTTGGCTCGAAGCTCGCTTCA CGGAGGCCTCTATGAACGACCCCGTTGCTTGTGTCACCTTAGGGTGTCAG ACCCACTCCTCGAATCCATCGATTGATTAGCACGGACTGCAGGAGTTGTT ACCCCCCCTCTCGCCTTGATAGTTTACTCTTCCCCCTTTAGCGCCTATCA CAGTTTCGTATTTTGGAGGAACATCCAGTATGACCTCTGCGCCAGGAGAC ATGGTGCTCCAAGATGCGAGCCAGTGAATCAACACCCCGTCTCCTGAAAT CATTATTTCCAGTTGATGATAATATTATTGATGTTCATCATAAGCTCTTG TGGTATGGGGGGACACCAGCGTGCACTGTCATGGCGGTGGTCATGGGCAC GAAGGTGGCCGTATTTAGTGTGGCTTGGTTCATGCTATGGCCTGACCGCT CCACCCATCATCGGCGGCGAGAGTAGCCTCGGCCCTCTCCACCCCCCGCT CCCCGACACCTTCGCGCCTGACCTACAATTTTGCCCATCTTCCGCATTTC TCGATCCACCACCTTTCACAACATCCAACCACCGCAGGTTTCCATGTCCG TCGAAGCGTCTAGCGCTACCGCGACGAGAGCCACGTTTGGTGGCCGCGTC CCTCCCCCCCCCGGTCTCGAGGCCTTCCCCGAAATGGCGACGGCAACTCC GACAGCGGATGGCGACGACCTGCTTGACGCGTTACTGGGGTTAGACGTCG CTGGTTCGTCGGGAAGAAGTGGACCGGTCGAGGCGGCGAGGGCAGTAGGT GGAAGTGCAACATCGGGCGATTTTAACCACACCGGTCTCGATGGAACTCC GAAAATGTCGTTCAGCGAGGTTACTGCTGTTGCTGCGGGAGATGGAGCTT TTGGCGCGCAGGGTGCTGTCGGGGACTCCATGCTTGACGCCCTTTTAGGC CTTGACGTTGGAGACGTTTCGACTCTGGGAGACGACGAAGCTGTCCCCGG TGAATCGTTAATCGATGGTATTATTTCAGGGAAAAGCTTCCCCGGTGAAG ACGTCACCGGCGAACAGGTGGACGCCGGTTGTGCTGAGGTATCTGATGAG CTGGTTGTCGGGGGCAGTGCTGACGTGAGTGGCACAGGGGGAGAGGGGTG GAGGGACGGCGGGAAGGCGGGTACGGTGGGCAGTCCTCCGTTTGATGGAG CGGAGCTTGGGCGACTGTGCCGGCACCTCAACGATCGGAACAGAAGAGCG AAGCGCTTGGCCCAGCGCTGCCAGGATATGTTCCTGAGTCTGTTCTTCAA GGTGGGTTCCCGTGCCTCGGCGACTGAAGTTGAACACGGGTAGCAGGCTG CCAGAAGATGGAACGCTTTGGCGGCTTGCATTTCGGTCGCGCTTGGACTA TGTAGCATGTGGAGAGAGTGTTGGTTTATCGTATGCATCCGCCGGCAAGG CCTCTAGCCAGGAAACTGTGTTTCGCTTCGTCTACCTGCCGCCCTTAGGT TTCCCGCCCCCATATTTTTTCGCGGGTTGCCACAAACGAAAGATTCCACC GAGGTTCGAGGTGACGGCTTCGATCATTTAGCTGGGCGATTAACATTTTG TCTAGATTGTGGCCCTAGTCCTAATGACAGGTGTTTCGACGGTAGCATCT TATGACGAGTCGGCTCGGCCTCCATTGATTGGCTATACCCTCGAAATAAA GTAGTTTTAATCAAATTCGTCATGAAATTAATCACATCCCTACTGGGCGT AGAGGATGATTCAAGAGATGTTTTCGACCCGTTTGTTTTCGGGACAGTAA CTGGCGCATTCCCCGCCGATCACCTTGTGCGAGCAGTTGACGGTCTACGT TGCCCCTTAGCCGATTGAGATCTCGACTTGTCGCCTCTCCTGCCGGCATG TCGTACGAGAGGTACGGCGATACCGTGGAGGGACCGTTCATACTCTTTGG AATGCTGGGCACCGCAGCGAAATTGTGGGTATGGGCAGCCCCGTATGCAA AGGGGGCGATGTTTTACCAAGCCGGCTTTGAGGAAAAACAGGTTGAGGCA ATTTATTTCCACCAGAGGCGGCGACCCTGTGCGTACAACGCCCCCCTCTT TCTCCCTTCCTCGAGTACCATTGCTATGCATCGCCCTTTCCTTCCATGTA CACAAGTACTTGGGGAATCCTAGTTTTCATGCACAAAACCATACCAACCG TGCTCGCCAGAAAGCCCCTGAACTCGTCGAGTGAGTCAAGATTTGATGGA CCTCTCGCTGCCTTTCCACCACATTCCGTTAGTGGGTCATTGGGAACCTC GCCGATTCGTCCCTGCCAACCTTTTGTCGTTTGTCATGTGCAATCGCGCT TGTGCCATATGGTTTGCTATGTGTTATCAGCTAAGGTTTTTATTCCGTTG GTCGCAGGGGCGCAGCCGAGTGTTTGATTATACCGGTGCCCATCCTGACG CCTGATGCCCATTTGCCGTTGTGATGGCAGCTGGATGTGCAGTGAATCGA GCAAATGTGAGACCTTCATTATTGCTCATACCGGAACGCCGTGGAAACAC AGCGTCCATTCTGGTGCCTGGTCGCAGATAGTATTCCTCACGCCTCAGCG TACCCCCCCCCCCCCGGTGCGGTCTTGTAATGTTGCACCAGGACCACTCC GAGGTGGTGCAGGGGCTGGTGCTGAGCCTACGCGCGAACGGTTTCATTGC GTACGTGCCGGCTTTCGACGCCAAGGGACCGGTTTATCTGAGCGACATGG ACGGCCAAGTTCAGGTGAAAAGGCTGTTGACCTGACCTCGGAATGGTCCG TACTACGACAGTAGCGATGGATTATGTCGATTTCCTGCGAGCATATGACT ACTTGGAAGAGGAAGCCATCGCAATAACGCAGCAACCGCGAGGGACCCGC GTGCGACTATTTCTTTGACGGGGCTAAATTTTGTAGCAACAACGAGTGTC GACGAGCTCATGGCGCGGTCACCGAGTGTAGCTTAGCAAGGAAACCCACG ACGAGATCCGCCGACGCATCTCGGACAGCAGTGCTTTGATTTCTTTGTCG GCAATATGGTTTCCCAAAGGAGCGTACTGAACAGTGTATTTTCGTGCTTT TTCCATCAGTTCGCATGAGCCGTTGTTTCACATTTGTCCCGATCGTAGAA TAGGAGAACCTTTTTGAATCCATGTGCCGCTAATTGCGCTTGTCGTGCAA CATAGTTTACGTGGGTTTCCCCATGCTGATCATTCGGCATACGGAAAGGC ATGGCCCTTTCTGGTCACTTGATCGACGGAAATGCGGCATTCAAACAGAG CCCGTGTCTTCCGTCCCTTGTTGCAGGTTGACCCGGCCTTGCTAGGCCTC CCAGCCACCGCGGGCGCCCCCCCATCCAAGGGCTTTGTCAGCCTACCAGC GTGTCGAGCGTTCACAGGTGCTAGCATAACGCTCGCGTCAACCCCAGCTT CCGCATTGGCCGGCGCGGCACGATATCCAAGCTCAGGGGAAGGAGGCGAG GGAGAGGAGGTGCTTGAGGTCAGACCTCCGCCTGGTACCGGCGGCAAGGT GTTGAAGCTCAAGGTTCTGGATGGAGTCAGCCTTCGGGTGAGTCTCGCAA CGCTAAGCCGGGAATTTGAAATTGCTCCCCATGTTGAGAGCGTTGTTTGG TTCCGAGTTTGTTTTTAAGTTAAAGATTGATGCGGTACGGATGAGTGCCT AGGACGAGATGAGGGGCCGGAATCGAATCTGAAGACGGAAATAACTAATT TTCGTGATCGTCCCTCGGGCAGCATCGCTTTTTTTGGCGGCCACGGAATA GTAGTACTTTCAACGTAAAGATATGCCACATCGACTTCAACGTCGCCCCC GATTCTCCGCTACAGTTTCCACAATGTTTTCATATCTTCCCTTCGTCGAC GTTCCCCCTCCTGCCGGTGCTTCACCCCCGTGTTTCCCAGATTTCATGCG ACATCCTCCCTACGCAAGCGCGCCTACCGAAGGTACGATTTCTGCTTGCT GGTGTTGGCAACCACTTATCGAAGACGAAGCCAACGAAGACACAGCGAAC CTCCGACGCTGGTGCATCTAAAGTACCTTCTGCGCAGGCGCACGAGTTCC ATCGAACCAAGGGTGGCAGGGACCATATATTACCGTCCCCGAGTGACCAG GCCGACATCGATGCGGACGGGAGTCGTGTGGCCGTTCTAGATGGGGGTGG TGCCTCTGGGACTCGAGGAGGGGGGGGACTATACCGAATTCTCCAAGGCA CCCTCGATAACGCGCTCCGAACGGATCCCGTCTCAACACGGCACGACTCA GACGTAGACATCGTTGCTCCTTCATCGACCCTTCCGCACGGCCCCGGCCT TGGAAGTCACCCCAACAAGCTGGGGACCCGCGCGGGGAATATAGGTGCCG GAAACGAGCCCGTGCCCGAGAAACAGAAACGGGGAAAGAAAAAGGCATCC CCGGCGAAGGCGACAGAGCGAGCAGATATTGGGGCGGGGCGAGCGTTGTT CGGGGGCTTCGTGCCGTCGAGGGAAGCACCCGCGGCGTCCCTTTATGATT TCGGAGATAGCAGCAGTAGGGCCGACGGTGGACTTTCGGCGCTTGGAAGC ATTTATGGGAACGGGGCAGGGAGGGGCATCGGTGGAGGAACGCTGGAGAC ACTGGACGATGCTAAAGTTCGCCAGTACACACAGGAGGCCACTGTCCGAG CGCAGAGACTCGGCGCTGAGAAACGAAGCTCGCGAATTTCCCGATCAAAG CGGCAGGGCTAAGAGTAGCGCTTGTCGAGGTAGAAATACAGCGCAAACAT ACACTGGCGTTACACAGTTTATCCGGTGCCCTTAGGAGCAGGTGAAGAAG CTTAGATGGCTAGCCTGGCCTACATTGTTCGAAGGCGATATTGCCTTGGT GCTCTGAGTTTGCGTACAATAGGAGGGCTGACGGCTATCTGAGGAAAAGC GGTTTTAGTTTTGATTTCTCCCGATTTGTGATGCAGTCATCCGCAGGGCG TGTTAGATCTTCGCCCGCAGATTTGGACGTGCATATACCGAACGTATATT TGAGTCATCGGTTGGTACACGCATCCTCGGTTATGCTGCCTGTAGCCGGC TACTATTCGTGTTATTGTGTACGCAGTCAGCTAGGAAATCGTGGCCAATC TACGCTGTAAGCGATAAGTCCCTGGCCTGAAATGGAAGGTCTCTAATTTA TCCTTCCCCGTAGTATGTTGCAACCTTGTCTGCCAACGCGCTGGTAGATA TTTAAGCGGAATCTTCGCTAACACAAGCCTTCAATTCATGGAAAAGTGAG TTCGGTCCGATACTGCTCGTCTGAACCGTGGCAATCGGGTTGGTTTCAGC GTAGGCTTGGAAACCTACCGGGATGAGTTTTATGCGGCCGCGAGGTCGCC AAGAAAGCCTGCC
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Coding sequence (CDS) from alignment at S-dermatodea_contig1179:9234..22446-

>mRNA_S-dermatodea_contig1179.1134.1 ID=mRNA_S-dermatodea_contig1179.1134.1|Name=mRNA_S-dermatodea_contig1179.1134.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=5964bp|location=Sequence derived from alignment at S-dermatodea_contig1179:9234..22446- (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGCTCCCGGCGCTCCTGTCGTCTGATCTCTGCTCTCTCCACGCCGGGCA
AGACAGGCTCGCGGTCTCGGTAGTCTGGGAGGCCGAGGAAGACGGGGAGG
ACATCAACATCTGCAGGAGATGCTCCCGGCGCTCCTGTCGTCTGATCTCT
GCTCTCTCCACGCCGGGCAAGACAGGCTCGCGGTCTCGGTAGTCTGGGAG
GCCGAGGAAGACGGGGAGGACATCAACATCTGCAGGAGGGCCGACGGGAC
CCCTGTGTGCTGGTTTGGGAGGACCGTAATCCACTCCGAGGCTTCCATGA
CGTACGGCCAGGGCCGACGGGACCCCTGTGTGCTGGTTTGGGAGGACCGT
AATCCACTCCGAGGCTTCCATGACGTACGGCCAGGCTCAGAGCCTGGTGG
AAGAAAGCAAGATCGTCAAACCCCGAGGACACGAGGAGCCCCCTCCCGGC
CAAGCCGGACGAGATGTCCAAGAAGGCCTCCAGCCCGCCTTGGCGCAAGA
CTTGCGGCTGCTCACACGTTTCGCTAGGCTCAGAGCCTGGTGGAAGAAAG
CAAGATCGTCAAACCCCGAGGACACGAGGAGCCCCCTCCCGGCCAAGCCG
GACGAGATGTCCAAGAAGGCCTCCAGCCCGCCTTGGCGCAAGACTTGCGG
CTGCTCACACGTTTCGCTAGGACGACGAGGAAGGAGCGTACGAAAAACGG
CGCGATCGACTTGTCCCAGGCCGGCGCCGAGCTGAAGTTCAAGATTGACC
CTGTCACGGGACGACGAGGAAGGAGCGTACGAAAAACGGCGCGATCGACT
TGTCCCAGGCCGGCGCCGAGCTGAAGTTCAAGATTGACCCTGTCACGGGC
ACACCGCTCGCTGTAGCCGGCAAGGAAGAATCCGAGATTCACCACACCAT
CGCGGAGCTCATGATCCTCGCCAACGGCGCCGTCGCCGAGAAAATTCAGC
AAACGTTCCCGTCGGCGGCCCTAGTCCGCGTGCATACCCCGCCCGACCCC
TCGAGACTCACGGCATTCGAAGGCGTGGCGGCTAAAGTAGGGGTAGGCGG
CACAGGCAAGGGCGGAGGCGGCACACCGCTCGCTGTAGCCGGCAAGGAAG
AATCCGAGATTCACCACACCATCGCGGAGCTCATGATCCTCGCCAACGGC
GCCGTCGCCGAGAAAATTCAGCAAACGTTCCCGTCGGCGGCCCTAGTCCG
CGTGCATACCCCGCCCGACCCCTCGAGACTCACGGCATTCGAAGGCGTGG
CGGCTAAAGTAGGGGTAGGCGGCACAGGCAAGGGCGGAGGCGGTCTGTCG
GCGAGCCTTGCGACGGCGGAGAGCGGCGGCTTCAAGGGTGAAGCTGGCAA
GGTGGGCCTGCTCAAGTCCCTCGCCGTTCGAGCCATGTCTGAGGCGGAGT
ACGTGTCCACCGGTCTGTCGGCGAGCCTTGCGACGGCGGAGAGCGGCGGC
TTCAAGGGTGAAGCTGGCAAGGTGGGCCTGCTCAAGTCCCTCGCCGTTCG
AGCCATGTCTGAGGCGGAGTACGTGTCCACCGATCTCGGGGGGGACCGTT
TTGGGCACTTCGGTCTAGGACTCTCCCACTACACGCACTTCACCAGTCCC
ATCCGAAGATACGCCGACGTCGTGGTCCACCGTCTCTTGCTGGCCGCCAT
TGGCGCGACACCTTCAACTGTGAGTTCGGAAAGGTTTGGGAATTTTCCCG
ATCTCGGGGGGGACCGTTTTGGGCACTTCGGTCTAGGACTCTCCCACTAC
ACGCACTTCACCAGTCCCATCCGAAGATACGCCGACGTCGTGGTCCACCG
TCTCTTGCTGGCCGCCATTGGCGCGACACCTTCAACTGTGAGTTCGGAAA
GGTTTGGGAATTTTCCCGCGCCGGCGCGGCTTACAAGCGGGGACGGCCGC
CTGACATTCCCTCCCGGAGAAGTGGGCGCTCTGCCCCCATCGTTGGCCCC
TTCGGTGATGGAAATGGAAGAGCGCCGGCGCGGCTTACAAGCGGGGACGG
CCGCCTGACATTCCCTCCCGGAGAAGTGGGCGCTCTGCCCCCATCGTTGG
CCCCTTCGGTGATGGAAATGGAAGAGGCCGCCGTGGGGAAAGCGGAGTTT
GAGGCGGCGGAAAGGCGTGCTCGGAGAGCCGGGGCAGGGGACGCGTCGTT
TGTCACTAATCCCGATGGGACACGAACGTACAACAAGGCGAGCGGCAGCC
GCCGTGGGGAAAGCGGAGTTTGAGGCGGCGGAAAGGCGTGCTCGGAGAGC
CGGGGCAGGGGACGCGTCGTTTGTCACTAATCCCGATGGGACACGAACGT
ACAACAAGGCGAGCGGCACGTCTAGCGCTACCGCGACGAGAGCCACGTTT
GGTGGCCGCGTCCCTCCCCCCCCCGGTCTCGAGGCCTTCCCCGAAATGGC
GACGGCAACTCCGACAGCGGATGGCGACGACCTGCTTGACGCGTTACTGG
GGTTAGACGTCGCTGGTTCGTCGGGAAGAAGTGGACCGGTCGAGGCGGCG
AGGGCAGTAGGTGGAAGTGCAACATCGGGCGATTTTAACCACACCGGTCT
CGATGGAACTCCGAAAATGTCGTTCAGCGAGGTTACTGCTGTTGCTGCGG
GAGATGGAGCTTTTGGCGCGCAGGGTGCTGTCGGGGACTCCATGCTTGAC
GCCCTTTTAGGCCTTGACGTTGGAGACGTTTCGACTCTGGGAGACGACGA
AGCTGTCCCCGGTGAATCGTTAATCGATGGTATTATTTCAGGGAAAAGCT
TCCCCGGTGAAGACGTCACCGGCGAACAGGTGGACGCCGGTTGTGCTGAG
CGTCTAGCGCTACCGCGACGAGAGCCACGTTTGGTGGCCGCGTCCCTCCC
CCCCCCGGTCTCGAGGCCTTCCCCGAAATGGCGACGGCAACTCCGACAGC
GGATGGCGACGACCTGCTTGACGCGTTACTGGGGTTAGACGTCGCTGGTT
CGTCGGGAAGAAGTGGACCGGTCGAGGCGGCGAGGGCAGTAGGTGGAAGT
GCAACATCGGGCGATTTTAACCACACCGGTCTCGATGGAACTCCGAAAAT
GTCGTTCAGCGAGGTTACTGCTGTTGCTGCGGGAGATGGAGCTTTTGGCG
CGCAGGGTGCTGTCGGGGACTCCATGCTTGACGCCCTTTTAGGCCTTGAC
GTTGGAGACGTTTCGACTCTGGGAGACGACGAAGCTGTCCCCGGTGAATC
GTTAATCGATGGTATTATTTCAGGGAAAAGCTTCCCCGGTGAAGACGTCA
CCGGCGAACAGGTGGACGCCGGTTGTGCTGAGGCGGGTACGGTGGGCAGT
CCTCCGTTTGATGGAGCGGAGCTTGGGCGACTGTGCCGGCACCTCAACGA
TCGGAACAGAAGAGCGAAGCGCTTGGCCCAGCGCTGCCAGGATATGTTCC
TGAGTCTGTTCTTCAAGGCGGGTACGGTGGGCAGTCCTCCGTTTGATGGA
GCGGAGCTTGGGCGACTGTGCCGGCACCTCAACGATCGGAACAGAAGAGC
GAAGCGCTTGGCCCAGCGCTGCCAGGATATGTTCCTGAGTCTGTTCTTCA
AGGACCACTCCGAGGTGGTGCAGGGGCTGGTGCTGAGCCTACGCGCGAAC
GGTTTCATTGCGTACGTGCCGGCTTTCGACGCCAAGGGACCGGTTTATCT
GAGCGACATGGACGGCCAAGTTCAGGACCACTCCGAGGTGGTGCAGGGGC
TGGTGCTGAGCCTACGCGCGAACGGTTTCATTGCGTACGTGCCGGCTTTC
GACGCCAAGGGACCGGTTTATCTGAGCGACATGGACGGCCAAGTTCAGGT
TGACCCGGCCTTGCTAGGCCTCCCAGCCACCGCGGGCGCCCCCCCATCCA
AGGGCTTTGTCAGCCTACCAGCGTGTCGAGCGTTCACAGGTGCTAGCATA
ACGCTCGCGTCAACCCCAGCTTCCGCATTGGCCGGCGCGGCACGATATCC
AAGCTCAGGGGAAGGAGGCGAGGGAGAGGAGGTGCTTGAGGTCAGACCTC
CGCCTGGTACCGGCGGCAAGGTGTTGAAGCTCAAGGTTCTGGATGGAGTC
AGCCTTCGGGTTGACCCGGCCTTGCTAGGCCTCCCAGCCACCGCGGGCGC
CCCCCCATCCAAGGGCTTTGTCAGCCTACCAGCGTGTCGAGCGTTCACAG
GTGCTAGCATAACGCTCGCGTCAACCCCAGCTTCCGCATTGGCCGGCGCG
GCACGATATCCAAGCTCAGGGGAAGGAGGCGAGGGAGAGGAGGTGCTTGA
GGTCAGACCTCCGCCTGGTACCGGCGGCAAGGTGTTGAAGCTCAAGGTTC
TGGATGGAGTCAGCCTTCGGATTTCATGCGACATCCTCCCTACGCAAGCG
CGCCTACCGAAGGTACGATTTCTGCTTGCTGGTGTTGGCAACCACTTATC
GAAGACGAAGCCAACGAAGACACAGCGAACCTCCGACGCTGGTGCATCTA
AAGTACCTTCTGCGCAGGCGCACGAGTTCCATCGAACCAAGGGTGGCAGG
GACCATATATTACCGTCCCCGAGTGACCAGGCCGACATCGATGCGGACGG
GAGTCGTGTGGCCGTTCTAGATGGGGGTGGTGCCTCTGGGACTCGAGGAG
GGGGGGGACTATACCGAATTCTCCAAGGCACCCTCGATAACGCGCTCCGA
ACGGATCCCGTCTCAACACGGCACGACTCAGACGTAGACATCGTTGCTCC
TTCATCGACCCTTCCGCACGGCCCCGGCCTTGGAAGTCACCCCAACAAGC
TGGGGACCCGCGCGGGGAATATAGGTGCCGGAAACGAGCCCGTGCCCGAG
AAACAGAAACGGGGAAAGAAAAAGGCATCCCCGGCGAAGGCGACAGAGCG
AGCAGATATTGGGGCGGGGCGAGCGTTGTTCGGGGGCTTCGTGCCGTCGA
GGGAAGCACCCGCGGCGTCCCTTTATGATTTCGGAGATAGCAGCAGTAGG
GCCGACGGTGGACTTTCGGCGCTTGGAAGCATTTATGGGAACGGGGCAGG
GAGGGGCATCGGTGGAGGAACGCTGGAGACACTGGACGATGCTAAAGTTC
GCCAGTACACACAGGAGGCCACTGTCCGAGCGCAGAGACTCGGCGCTGAG
AAACGAAGCTCGCGAATTTCCCGATCAAAGCGGCAGGGCTAAATTTCATG
CGACATCCTCCCTACGCAAGCGCGCCTACCGAAGGTACGATTTCTGCTTG
CTGGTGTTGGCAACCACTTATCGAAGACGAAGCCAACGAAGACACAGCGA
ACCTCCGACGCTGGTGCATCTAAAGTACCTTCTGCGCAGGCGCACGAGTT
CCATCGAACCAAGGGTGGCAGGGACCATATATTACCGTCCCCGAGTGACC
AGGCCGACATCGATGCGGACGGGAGTCGTGTGGCCGTTCTAGATGGGGGT
GGTGCCTCTGGGACTCGAGGAGGGGGGGGACTATACCGAATTCTCCAAGG
CACCCTCGATAACGCGCTCCGAACGGATCCCGTCTCAACACGGCACGACT
CAGACGTAGACATCGTTGCTCCTTCATCGACCCTTCCGCACGGCCCCGGC
CTTGGAAGTCACCCCAACAAGCTGGGGACCCGCGCGGGGAATATAGGTGC
CGGAAACGAGCCCGTGCCCGAGAAACAGAAACGGGGAAAGAAAAAGGCAT
CCCCGGCGAAGGCGACAGAGCGAGCAGATATTGGGGCGGGGCGAGCGTTG
TTCGGGGGCTTCGTGCCGTCGAGGGAAGCACCCGCGGCGTCCCTTTATGA
TTTCGGAGATAGCAGCAGTAGGGCCGACGGTGGACTTTCGGCGCTTGGAA
GCATTTATGGGAACGGGGCAGGGAGGGGCATCGGTGGAGGAACGCTGGAG
ACACTGGACGATGCTAAAGTTCGCCAGTACACACAGGAGGCCACTGTCCG
AGCGCAGAGACTCGGCGCTGAGAAACGAAGCTCGCGAATTTCCCGATCAA
AGCGGCAGGGCTAA
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