prot_S-dermatodea_contig1176.1112.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig1176.1112.1
Unique Nameprot_S-dermatodea_contig1176.1112.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length264
Homology
BLAST of mRNA_S-dermatodea_contig1176.1112.1 vs. uniprot
Match: D8LDF2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDF2_ECTSI)

HSP 1 Score: 425 bits (1093), Expect = 9.550e-149
Identity = 214/266 (80.45%), Postives = 243/266 (91.35%), Query Frame = 0
Query:    1 MVYNPPIERDEDGT-IKQGEIALTHPVNPMRRGAYVEQATRATGWAFMYVVGWLLMRLSCYAGLPNDCDLPNEPLEVLTDLLVLLVFSLAQAWFCEIMEERRFRDLSTKAYFPIFLVGASLAISGASRAESLRSDL-DTTNDLSTFQVSIFIILLIITLVVLMAHFAEAWKVLPGAHLISGVGVPRIQVQEDLLSIYMASRLMILAFFLLYVAFSVARDDGWGYQLYLMAWVLSLFAQFKSTISVFWLAVTTGVFLQGIGVSADGN 264
            MVYNPP+ER EDG  IK G +ALTHPVNPMRRGAYVEQATRATGWA MY++GWLLMRLSCYAGLP DC+LP+EPLEVLT LLVLLVFSLAQAWFCEIMEERRFRDL++K YFP+ +VGA+LA+SG SRAESLR+ L +   DL+TFQV+IFIILLI+T+VVL+ HFAEAWKVLPGAHLISGVGVPR++V+EDLLSIY+ASR++ILA+F+LY AFSVARDDGWGYQLYL+AWVLSLFAQFKS ISVFWLAVTTGVFLQGIG  +  N
Sbjct:    1 MVYNPPVERGEDGEPIKDGGVALTHPVNPMRRGAYVEQATRATGWAVMYILGWLLMRLSCYAGLPGDCNLPDEPLEVLTVLLVLLVFSLAQAWFCEIMEERRFRDLASKVYFPLLMVGAALALSGLSRAESLRNSLQEERRDLTTFQVAIFIILLILTVVVLLLHFAEAWKVLPGAHLISGVGVPRVEVREDLLSIYVASRMLILAYFILYAAFSVARDDGWGYQLYLLAWVLSLFAQFKSFISVFWLAVTTGVFLQGIGNQSSSN 266          
BLAST of mRNA_S-dermatodea_contig1176.1112.1 vs. uniprot
Match: D7G1P1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1P1_ECTSI)

HSP 1 Score: 206 bits (525), Expect = 5.360e-62
Identity = 117/261 (44.83%), Postives = 164/261 (62.84%), Query Frame = 0
Query:    1 MVYNPPI-ERDEDGTIKQGEIALTHPVNPMRRG-AYVEQATRATGWAFMYVVGWLLMRLSCYAGLPNDCDLPNEPLEVLTDLLVLLVFSLAQAWFCEIMEERRFRDLSTKAYFPIFLVGASLAISGASRAESLRS-DLDTTNDLSTFQVSIFIILLIITLVVLMAHFAEAWKVLPGAHLISGVGVPRIQVQEDLLSIYMASRLMILAFFLLYVAFSVARDDGWGYQLYLMAWVLSLFAQFKSTISVFWLAVTTGVFLQGIG 258
            MV+NPP+ ++D D   K  ++     V+P R G AY+EQA RA  W  + ++ WL  RL C+  LP  CDLP++ LEVLTDLL LLVF L QAWFCE++EERRFR L+ +AYF I ++   L +S     +  +    +  +D     + + ++L+   LV++  HFAEAW+ LPGA+ +SG     I ++E+L  IY  SR +I+++ LLY AF+    DG      L+AWVLSL AQFKS  S+ WLA+ TGVF+QG G
Sbjct:    1 MVFNPPVLKQDADDAEKPVKVT----VSPARSGDAYIEQAKRAAAWIGLLLLCWLFQRLMCHFNLPPHCDLPSDALEVLTDLLALLVFGLTQAWFCEVLEERRFRHLTREAYFGIVIIVIGLIVSAIETTDWFQDMRFNDNSDWRDSHIVMAVVLITFVLVIVAYHFAEAWRTLPGAYYVSGNINLDIVIEENLHRIYNVSRGLIVSYALLYGAFAFEEGDGLKQHYVLLAWVLSLTAQFKSKPSIIWLALCTGVFIQGFG 257          
BLAST of mRNA_S-dermatodea_contig1176.1112.1 vs. uniprot
Match: D8LDF3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDF3_ECTSI)

HSP 1 Score: 171 bits (433), Expect = 4.400e-49
Identity = 102/234 (43.59%), Postives = 145/234 (61.97%), Query Frame = 0
Query:   32 GAYVEQATRATGWAFMYVVGWLLMRLSCYAGLPNDCDLPNEPLEVLTDLLVLLVFSLAQAWFCEIMEERRFRDLSTKAY-FPIFLVGASLAISGASRAESL-RSDLDTTN---DLSTFQVSIFIILLIITLVVLMAHFAEAWKVLPGAHLISGVGVPRIQVQEDLLSIYMASRLMILAFFLLYVAFSVARDDGWGYQLYLMAWVLSLFAQFKSTISVFWLAVTTGVFLQGIGVS 260
            G Y  Q  RA  WA +Y + W+L RL C+ GLP+ CDL   PL+VLTDL+VL  FSLAQA++CEI+ + RF +L    + F + L+   + IS   R   L R D D      + S  + +IF+  LI  ++++  HFA AW  LPG  L+SG GV     +EDL  IY +SR++I+A+ +L+ +F ++ DDG+ Y+  L+AW+LSL A F   +S  WL V TG+FLQGIG +
Sbjct:    2 GGYEGQNKRALIWAALYFLAWILQRLWCHLGLPDHCDLAMRPLDVLTDLVVLFTFSLAQAYWCEILLDDRFEELKKAPWIFGVILI-TPIIISALGRIGGLERWDKDNEGKDFEFSALRSTIFVFGLIAAVLLVAWHFARAWLTLPGMQLLSG-GVKVEPPKEDLHGIYSSSRIVIIAWCILFTSFIISEDDGFDYRGALLAWMLSLIAVFPHPVSYIWLGVNTGIFLQGIGAN 233          
BLAST of mRNA_S-dermatodea_contig1176.1112.1 vs. uniprot
Match: A0A6H5JMR1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMR1_9PHAE)

HSP 1 Score: 144 bits (364), Expect = 2.430e-38
Identity = 92/246 (37.40%), Postives = 130/246 (52.85%), Query Frame = 0
Query:   21 ALTHPVNPMRRGAYVEQATRATGWAFMYVVGWLLMRLSCYAGLPNDCDLPNEPLEVLTDLLVLLVFSLAQAWFCEIMEERRFRDLSTKAYFPIFLVGASLAISGASRAESLRSDLDTTNDLSTFQVSIFIILLIITLVVLMAHFAEAWKVLPGAHLISGVGVPRIQVQE--------DLLSIYMASRLMILAFFLLYVAFSVARDDGWGYQLYLMAWVLSLFAQFKSTISVFWLAVTTGVFLQGIG 258
            ALT     M      EQ  +A  W   Y+  + LM  SC  G+P +C    + ++VLT+L  L VF+   A+ C I+   R+  LS K YFP+ ++ + LA S     +      D   DLS  + ++ IILLI+  +V   H+  AWK LPG  L  G G+   QV E        +    YMAS  +I+ + +L+ AF+ +R D W Y   L+AW++SL A F   ISV WL +TTGVFLQG+G
Sbjct:   27 ALTSQAAAMALVWDAEQGVKAASWVGFYIFLYALMAASCEVGVPENCTRATDAMDVLTELPFLFVFA---AFMCGILNGTRYHALSKKMYFPVLVIASGLATSALMNNDGFEGLHDPGGDLSPAEAALSIILLILVALVFAYHYFLAWKFLPGGWL--GWGMVSGQVAEPPPPSRAENRYLQYMASITVIMLYIVLFSAFAYSRGDEWDYHYVLLAWLMSLIAAFDDYISVAWLGITTGVFLQGVG 267          
BLAST of mRNA_S-dermatodea_contig1176.1112.1 vs. uniprot
Match: A0A7S3XT19_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XT19_HETAK)

HSP 1 Score: 89.7 bits (221), Expect = 1.370e-17
Identity = 67/232 (28.88%), Postives = 109/232 (46.98%), Query Frame = 0
Query:   31 RGAYVEQATRATGWAFMYVVGWLLMRLSCYAGLPNDCDLPNEPLEVLTDLLVLLVFSLAQAWFCEIMEERRFRDLST--KAYFPIFLVGASLAISGASRAESLRSDLDTTNDLSTFQVSIFIILLIITLVVLMAHFAE--AWKVLPGAHLISGVGVPRIQVQEDLLSIYMASRLMILAFFLLYVAFSVARDDGWGYQLYLMAWVLSLFAQFKSTISVFWLAVTTGVFLQGIG 258
            R  Y  + TR   W  +    W++ R++C  G PNDC   + P   + D+ +LL++   QAWF EI+E RRF  + +  + YF + L G     S  S    +   + ++  LS   V++        LV     F+   A+ +L   H         +   ++ L +Y+  R+ +L FFL+Y+  +             +AW +SLFA F    S+  LAV+TGV +QG+G
Sbjct:   41 RKFYKGEYTRMGVWLAVLTCLWIITRVTCACGAPNDCVSESSPSTTMNDIQILLLYGFTQAWFVEILERRRFWHVFSLQRWYFWVVLAGTPPVFSVISDLPVMEFSISSSFSLSGGMVAV--------LVAAGTGFSLWLAFHILYAKH---------VYAMDNFL-VYVLGRVGVLLFFLVYMMVAYNEXXXXXXXXXWLAWAVSLFASFNHPASLLLLAVSTGVMVQGLG 254          
BLAST of mRNA_S-dermatodea_contig1176.1112.1 vs. uniprot
Match: D7G1N8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1N8_ECTSI)

HSP 1 Score: 85.9 bits (211), Expect = 3.330e-17
Identity = 54/131 (41.22%), Postives = 76/131 (58.02%), Query Frame = 0
Query:  136 DTTNDLSTFQVSIFIILLIITLVVLMAHFAEAWKVLPGAHLISGVGVPRIQVQE--------DLLSIYMASRLMILAFFLLYVAFSVARDDGWGYQLYLMAWVLSLFAQFKSTISVFWLAVTTGVFLQGIG 258
            D   +LS  + ++ IILL++  +V   H+  AWK LPG  L  G G+   QV E        +    YMAS  +I+ + +L+ AF+ +R D W Y   L+AW++SL A F   ISV WL +TTGVFLQG+G
Sbjct:   11 DPGGELSPAEAALSIILLVLVALVFAYHYFLAWKFLPGGWL--GWGMVSGQVAEPPPPSRAENRYLQYMASITVIMVYIVLFSAFAYSRGDEWDYHYVLLAWLMSLIAAFDDYISVAWLGITTGVFLQGVG 139          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1176.1112.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LDF2_ECTSI9.550e-14980.45Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7G1P1_ECTSI5.360e-6244.83Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D8LDF3_ECTSI4.400e-4943.59Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5JMR1_9PHAE2.430e-3837.40Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S3XT19_HETAK1.370e-1728.88Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
D7G1N8_ECTSI3.330e-1741.22Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 213..223
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 249..264
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 192..212
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 58..76
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 224..248
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 172..191
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 98..108
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..37
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 146..171
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 109..126
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 77..97
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 127..145
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 38..57
NoneNo IPR availableTMHMMTMhelixcoord: 226..248
NoneNo IPR availableTMHMMTMhelixcoord: 74..96
NoneNo IPR availableTMHMMTMhelixcoord: 42..64
NoneNo IPR availableTMHMMTMhelixcoord: 109..128
NoneNo IPR availableTMHMMTMhelixcoord: 191..213
NoneNo IPR availableTMHMMTMhelixcoord: 143..165

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig1176contigS-dermatodea_contig1176:16974..22276 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig1176.1112.1mRNA_S-dermatodea_contig1176.1112.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig1176 16758..22276 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig1176.1112.1 ID=prot_S-dermatodea_contig1176.1112.1|Name=mRNA_S-dermatodea_contig1176.1112.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=264bp
MVYNPPIERDEDGTIKQGEIALTHPVNPMRRGAYVEQATRATGWAFMYVV
GWLLMRLSCYAGLPNDCDLPNEPLEVLTDLLVLLVFSLAQAWFCEIMEER
RFRDLSTKAYFPIFLVGASLAISGASRAESLRSDLDTTNDLSTFQVSIFI
ILLIITLVVLMAHFAEAWKVLPGAHLISGVGVPRIQVQEDLLSIYMASRL
MILAFFLLYVAFSVARDDGWGYQLYLMAWVLSLFAQFKSTISVFWLAVTT
GVFLQGIGVSADGN
back to top