prot_S-dermatodea_contig1172.1097.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig1172.1097.1
Unique Nameprot_S-dermatodea_contig1172.1097.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length616
Homology
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BLAST of mRNA_S-dermatodea_contig1172.1097.1 vs. uniprot
Match: D7FLU9_ECTSI (C6 transcription factor Prf n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLU9_ECTSI)

HSP 1 Score: 104 bits (259), Expect = 1.100e-19
Identity = 46/83 (55.42%), Postives = 57/83 (68.67%), Query Frame = 0 
Query:   16 DMDACEMHGCDQTARFGLQSSMLPIRCGKHREEGMVERAKRRKACDTCTSRKIRCDGVQPACGPCTARQGTCRYSTRLKSGPK 98
            D+++CE   C   ARF   +S+ P RC +H   GM+ +AK RKACD CT+RK RCD V+P CG C A+  TCRYS RLKSGPK
Sbjct:  157 DLESCEAPECKDFARFAPPASLSPTRCSRHAAGGMIAKAKPRKACDVCTARKTRCDSVRPTCGTCAAQFATCRYSARLKSGPK 239
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BLAST of mRNA_S-dermatodea_contig1172.1097.1 vs. uniprot
Match: A0A6H5L603_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L603_9PHAE)

HSP 1 Score: 75.5 bits (184), Expect = 1.770e-10
Identity = 59/162 (36.42%), Postives = 70/162 (43.21%), Query Frame = 0 
Query:  443 PLKPPSQGLNLLAISQELQGGGGLSRAAPGVAPGP----IPPMGSPERGQVGDS------------------------SAVAENSIPGIPRFRGPSLSRTQSKLRR------SCDRCTMRKIRCDGSGVICKRCEVDGQACHYSLKSKSGPKPQPARNATPP 570
            PL+ PSQGLNLL +SQELQ   G  R + G A           GS E G+  ++                        +AVA                              SCDRCTMRKI+CDG    C+RC+ D Q CHYSLKSKSGPKP   R  + P
Sbjct:  362 PLRSPSQGLNLLLLSQELQEAAGTPRPSAGGAVSSKKCTTERSGSSENGRGREAGXXXXXXXXXXXXXXXXXXXXXXXAAVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSCDRCTMRKIKCDGREGKCQRCDRDNQFCHYSLKSKSGPKPNSIRRKSSP 523
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BLAST of mRNA_S-dermatodea_contig1172.1097.1 vs. uniprot
Match: K8YU74_NANGC (Tpa: zn 2cys6 transcription factor n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YU74_NANGC)

HSP 1 Score: 61.6 bits (148), Expect = 3.390e-6
Identity = 28/48 (58.33%), Postives = 35/48 (72.92%), Query Frame = 0 
Query:  513 RTQSKLRRSCDRCTMRKIRCDGSGVICKRCEVDGQACHYSLKSKSGPK 560
            R++ KLRRSCDRCT +KIRCDG    C+ C   G ACHYS + ++GPK
Sbjct:    7 RSRKKLRRSCDRCTSKKIRCDGLAA-CQNCVRRGYACHYSERRRTGPK 53
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BLAST of mRNA_S-dermatodea_contig1172.1097.1 vs. uniprot
Match: A0A317X8Q3_9EURO (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Aspergillus sclerotioniger CBS 115572 TaxID=1450535 RepID=A0A317X8Q3_9EURO)

HSP 1 Score: 51.2 bits (121), Expect = 5.700e-5
Identity = 23/38 (60.53%), Postives = 27/38 (71.05%), Query Frame = 0 
Query:   55 KRRK---ACDTCTSRKIRCDGVQPACGPCTARQGTCRY 89
            KRRK   AC  C +RKIRCDGV+P CGPC  R+ +C Y
Sbjct:    7 KRRKIALACTPCRARKIRCDGVEPTCGPCKRRETSCSY 44
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1172.1097.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FLU9_ECTSI1.100e-1955.42C6 transcription factor Prf n=1 Tax=Ectocarpus sil... [more]
A0A6H5L603_9PHAE1.770e-1036.42Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
K8YU74_NANGC3.390e-658.33Tpa: zn 2cys6 transcription factor n=3 Tax=Monodop... [more]
A0A317X8Q3_9EURO5.700e-560.53Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001138Zn(2)-C6 fungal-type DNA-binding domainSMARTSM00066gal4_2coord: 54..98
e-value: 5.3E-9
score: 45.9
coord: 516..560
e-value: 1.5E-5
score: 34.4
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPFAMPF00172Zn_cluscoord: 520..556
e-value: 2.8E-5
score: 24.1
coord: 58..93
e-value: 2.0E-7
score: 31.0
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPROSITEPS00463ZN2_CY6_FUNGAL_1coord: 59..87
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPROSITEPS00463ZN2_CY6_FUNGAL_1coord: 521..549
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPROSITEPS50048ZN2_CY6_FUNGAL_2coord: 521..551
score: 9.039
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPROSITEPS50048ZN2_CY6_FUNGAL_2coord: 59..89
score: 10.15
IPR036864Zn(2)-C6 fungal-type DNA-binding domain superfamilyGENE3D4.10.240.10coord: 513..568
e-value: 2.8E-8
score: 35.6
coord: 51..114
e-value: 4.3E-11
score: 44.6
IPR036864Zn(2)-C6 fungal-type DNA-binding domain superfamilySUPERFAMILY57701Zn2/Cys6 DNA-binding domaincoord: 53..94
IPR036864Zn(2)-C6 fungal-type DNA-binding domain superfamilySUPERFAMILY57701Zn2/Cys6 DNA-binding domaincoord: 512..556
NoneNo IPR availablePANTHERPTHR31668FAMILY NOT NAMEDcoord: 52..369
coord: 514..611
NoneNo IPR availablePANTHERPTHR31668:SF18MALTOSE FERMENTATION REGULATORY PROTEIN MAL13-RELATEDcoord: 514..611
NoneNo IPR availablePANTHERPTHR31668:SF18MALTOSE FERMENTATION REGULATORY PROTEIN MAL13-RELATEDcoord: 52..369

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig1172contigS-dermatodea_contig1172:10224..15174 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig1172.1097.1mRNA_S-dermatodea_contig1172.1097.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig1172 10224..15175 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig1172.1097.1 ID=prot_S-dermatodea_contig1172.1097.1|Name=mRNA_S-dermatodea_contig1172.1097.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=616bp
PRVSIAPESSRVVEPDMDACEMHGCDQTARFGLQSSMLPIRCGKHREEGM
VERAKRRKACDTCTSRKIRCDGVQPACGPCTARQGTCRYSTRLKSGPKRG
TGVESTPRRTGPTEIAPAPGPLFSGSPLPAGGSVSAATTAAAAAAAFSSP
FSSPLPTSPLAATISPMPSTPAMASATSNGAAPVPGIATGDPFMGGSGAL
GSGLETSPRALAAHALTGFRFTKDMPGAAGVGGGSPIWPASLGGVNAERG
AEQHRMGGQAGNNGVSEASAADVGGLPPLSMAQLGATSGFHLAMLGMLPA
FNALLGSLPPGLQMPQLQPAAGGLQVAPEASTPSQQQKAGELPVLHPAPL
VQAPLLALPKPASDQQQQAKLGQVAPRSAMTVLPATTPTAGVGPAVISEP
AAMYNGHPSVAPAQEAPATLVAIAPAVVHDSTLGPPIAPALPPLKPPSQG
LNLLAISQELQGGGGLSRAAPGVAPGPIPPMGSPERGQVGDSSAVAENSI
PGIPRFRGPSLSRTQSKLRRSCDRCTMRKIRCDGSGVICKRCEVDGQACH
YSLKSKSGPKPQPARNATPPPVAAGQGRPPPQAAILPYPMHNLPPSPPAG
ASSPAARNSWQHVAPA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001138Zn2-C6_fun-type_DNA-bd
IPR036864Zn2-C6_fun-type_DNA-bd_sf