mRNA_S-dermatodea_contig11706.1085.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig11706.1085.1 vs. uniprot
Match: A0A6H5JXE2_9PHAE (Asparagine synthetase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXE2_9PHAE) HSP 1 Score: 214 bits (545), Expect = 2.040e-64 Identity = 99/120 (82.50%), Postives = 110/120 (91.67%), Query Frame = 1
Query: 187 GAAALSDEMVKDQGRLWTRNLGRDDRCIADHGREARFPFLDEGVVGYIRSLPLLDVCNMEEPVGVGDKKILREVAGHLGLDSCRTLPKRAIQFGSRIAQHCARHTLGSHRRGSGTDPALA 546
G AAL++E++KDQ RLWTRNLGRDDR IADHGREARFPFLDE VVGY+R LPL +VCNM+EPVG+GDKK+LREVA HLGL+SCR LPKRAIQFGSRIAQHCARHT GSHRRGSG+DPA A
Sbjct: 62 GDAALAEELLKDQDRLWTRNLGRDDRAIADHGREARFPFLDEAVVGYLRCLPLREVCNMDEPVGIGDKKVLREVASHLGLESCRRLPKRAIQFGSRIAQHCARHTHGSHRRGSGSDPASA 181
BLAST of mRNA_S-dermatodea_contig11706.1085.1 vs. uniprot
Match: D7G9H9_ECTSI (Glutamine amidotransferase type-2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9H9_ECTSI) HSP 1 Score: 219 bits (557), Expect = 3.320e-59 Identity = 101/122 (82.79%), Postives = 113/122 (92.62%), Query Frame = 1
Query: 181 MAGAAALSDEMVKDQGRLWTRNLGRDDRCIADHGREARFPFLDEGVVGYIRSLPLLDVCNMEEPVGVGDKKILREVAGHLGLDSCRTLPKRAIQFGSRIAQHCARHTLGSHRRGSGTDPALA 546
+ G AAL++E++KDQGRLWTRNLGRDDR IADHGREARFPFLDE VVGY+RSLPL +VCNM+EPVG+GDKK+LREVA HLGL+SCR LPKRAIQFGSRIAQHCARHT GSHRRGSG+DPA A
Sbjct: 951 VVGDAALAEELLKDQGRLWTRNLGRDDRAIADHGREARFPFLDEDVVGYLRSLPLREVCNMDEPVGIGDKKVLREVASHLGLESCRRLPKRAIQFGSRIAQHCARHTHGSHRRGSGSDPASA 1072
BLAST of mRNA_S-dermatodea_contig11706.1085.1 vs. uniprot
Match: A0A7S4D4W9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D4W9_HETAK) HSP 1 Score: 147 bits (372), Expect = 3.660e-36 Identity = 71/121 (58.68%), Postives = 87/121 (71.90%), Query Frame = 1
Query: 166 KSQLRMAGAAALSDEMVKDQGRLWTRNLGRDDRCIADHGREARFPFLDEGVVGYIRSLPLLDVCNMEEPVGVGDKKILREVAGHLGLDSCRTLPKRAIQFGSRIAQHCARHTLGSHRRGSG 528
++ R G AL E+ D RLWTRNLGRDDRC++DHGREARFPFLDEGVV +R+LPL + ++ P G+GDKKILR+VA LGL + L KRAIQFGSRIA+H GS+R+G G
Sbjct: 314 RTAFREGGEGALRRELAADVARLWTRNLGRDDRCVSDHGREARFPFLDEGVVAAVRALPLRRIVDLSLPPGIGDKKILRDVAKTLGLQTSSLLVKRAIQFGSRIAKHSNIQAFGSNRKGKG 434
BLAST of mRNA_S-dermatodea_contig11706.1085.1 vs. uniprot
Match: A0A453JX15_AEGTS (Asparagine synthetase domain-containing protein n=3 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453JX15_AEGTS) HSP 1 Score: 141 bits (355), Expect = 1.090e-34 Identity = 67/117 (57.26%), Postives = 85/117 (72.65%), Query Frame = 1
Query: 166 KSQLRMAGAAALSDEMVKDQGRLWTRNLGRDDRCIADHGREARFPFLDEGVVGYIRSLPLLDVCNMEEPVGVGDKKILREVAGHLGLDSCRTLPKRAIQFGSRIAQHCARHTLGSHR 516
+++ R+ G +L +EM D R+W RN+GRDDRCI+DHG+EARFPFLDE V+ + +PL D+ ++EPVG GDKKILREVA LGL LPKRAIQFGSRIA+ R GS+R
Sbjct: 202 RTKYRVGGWVSLDEEMRLDVQRIWKRNMGRDDRCISDHGKEARFPFLDESVIRTLLEIPLWDIAKLDEPVGKGDKKILREVAKLLGLQEAAFLPKRAIQFGSRIARESNRKNFGSNR 318
BLAST of mRNA_S-dermatodea_contig11706.1085.1 vs. uniprot
Match: A0A2R6XIK4_MARPO (Asparagine synthetase domain-containing protein n=1 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6XIK4_MARPO) HSP 1 Score: 144 bits (362), Expect = 2.610e-34 Identity = 71/129 (55.04%), Postives = 89/129 (68.99%), Query Frame = 1
Query: 166 KSQLRMAGAAALSDEMVKDQGRLWTRNLGRDDRCIADHGREARFPFLDEGVVGYIRSLPLLDVCNMEEPVGVGDKKILREVAGHLGLDSCRTLPKRAIQFGSRIAQHCARHTLGSHRRGSGTDPALAVL 552
+++ + G L EM D R+W RNLGRDDRC++DHG+EARFPFLDE VV + +LPL DV NMEEP G G+KK+LR+VA LGL S +LPKRAIQFGSRIA+ R GS+R + + VL
Sbjct: 385 RTKFKQGGWVMLDAEMRLDFNRIWKRNLGRDDRCLSDHGKEARFPFLDEDVVAALLNLPLWDVVNMEEPAGCGEKKVLRQVARLLGLKSASSLPKRAIQFGSRIARESNRKDFGSNRAANLANAGTVVL 513
BLAST of mRNA_S-dermatodea_contig11706.1085.1 vs. uniprot
Match: A0A438J0U3_VITVI (Asparagine synthetase domain-containing protein 1 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438J0U3_VITVI) HSP 1 Score: 139 bits (350), Expect = 3.230e-34 Identity = 68/129 (52.71%), Postives = 87/129 (67.44%), Query Frame = 1
Query: 166 KSQLRMAGAAALSDEMVKDQGRLWTRNLGRDDRCIADHGREARFPFLDEGVVGYIRSLPLLDVCNMEEPVGVGDKKILREVAGHLGLDSCRTLPKRAIQFGSRIAQHCARHTLGSHRRGSGTDPALAVL 552
K++ R L++EM D R+W RNLGRDDRCIAD+G+EARFPFLDE V+ + +PL +V N+++P G GDKKILREVA LG+ TLPKRAIQFGSRIA+ R GS+R + V+
Sbjct: 175 KTKYRSGSWLGLNEEMKLDMQRIWKRNLGRDDRCIADNGKEARFPFLDEDVIRTLLDIPLWEVANLDQPSGTGDKKILREVAQMLGIYEAATLPKRAIQFGSRIARESNRKNFGSNRAANQASAGSVVI 303
BLAST of mRNA_S-dermatodea_contig11706.1085.1 vs. uniprot
Match: UPI0018AE803F (asparagine synthetase domain-containing protein 1 n=1 Tax=Dioscorea cayennensis subsp. rotundata TaxID=55577 RepID=UPI0018AE803F) HSP 1 Score: 144 bits (364), Expect = 5.400e-34 Identity = 70/117 (59.83%), Postives = 87/117 (74.36%), Query Frame = 1
Query: 166 KSQLRMAGAAALSDEMVKDQGRLWTRNLGRDDRCIADHGREARFPFLDEGVVGYIRSLPLLDVCNMEEPVGVGDKKILREVAGHLGLDSCRTLPKRAIQFGSRIAQHCARHTLGSHR 516
+++ R G AL +EM D R+W RNLGRDDRCI+DHG+EARFPFLDE V+ + +PL ++ N++EPVG GDKKILREVA LGL+S LPKRAIQFGSRIA+ R GS+R
Sbjct: 541 RTKYRAGGWLALHNEMRLDMQRIWKRNLGRDDRCISDHGKEARFPFLDEDVIRTLLEIPLWEITNLDEPVGKGDKKILREVAKLLGLESAALLPKRAIQFGSRIARESNRKNFGSNR 657
BLAST of mRNA_S-dermatodea_contig11706.1085.1 vs. uniprot
Match: UPI000CE23E87 (asparagine synthetase domain-containing protein 1-like n=1 Tax=Quercus suber TaxID=58331 RepID=UPI000CE23E87) HSP 1 Score: 138 bits (348), Expect = 1.090e-33 Identity = 67/129 (51.94%), Postives = 87/129 (67.44%), Query Frame = 1
Query: 166 KSQLRMAGAAALSDEMVKDQGRLWTRNLGRDDRCIADHGREARFPFLDEGVVGYIRSLPLLDVCNMEEPVGVGDKKILREVAGHLGLDSCRTLPKRAIQFGSRIAQHCARHTLGSHRRGSGTDPALAVL 552
K++ R L +EM D R+W RNLGRDDRCIAD+G+EARFPFLDE V+ + +P+ ++ N+++P G+GDKKILREVA LGL LPKRAIQFGSRIA+ R GS+R + AV+
Sbjct: 200 KTKYRKGSWLGLHEEMKLDMQRIWKRNLGRDDRCIADNGKEARFPFLDEDVIRTLLDIPMWEIANLDQPSGIGDKKILREVARLLGLYEAAVLPKRAIQFGSRIARESNRKNFGSNRAANQASAGSAVI 328
BLAST of mRNA_S-dermatodea_contig11706.1085.1 vs. uniprot
Match: A0A7S2P1Q0_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P1Q0_9STRA) HSP 1 Score: 134 bits (337), Expect = 1.120e-33 Identity = 65/122 (53.28%), Postives = 85/122 (69.67%), Query Frame = 1
Query: 166 KSQLRMAGAAALSDEMVKDQGRLWTRNLGRDDRCIADHGREARFPFLDEGVVGYIRSLPLLDVCNMEEPVGVGDKKILREVAGHLGLDSCRTLPKRAIQFGSRIAQHCARHTLGSHRRGSGT 531
+S G AL E+ ++ R+WTRNLGRDDRC++D+GREARFPFLDE VV ++ SLP+ D+C+M G GDK ILR VA +G+ +C +L KRAIQFGSRIA+ H GS + +GT
Sbjct: 63 RSVYNRGGYDALQAELQMEKMRIWTRNLGRDDRCVSDNGREARFPFLDEEVVEFLESLPITDICDMNRVQGEGDKMILRLVAKIIGVHACSSLVKRAIQFGSRIAKASDVHQFGSSKHATGT 184
BLAST of mRNA_S-dermatodea_contig11706.1085.1 vs. uniprot
Match: A0A2R6XIK7_MARPO (Glutamine amidotransferase type-2 domain-containing protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6XIK7_MARPO) HSP 1 Score: 144 bits (362), Expect = 1.270e-33 Identity = 71/129 (55.04%), Postives = 89/129 (68.99%), Query Frame = 1
Query: 166 KSQLRMAGAAALSDEMVKDQGRLWTRNLGRDDRCIADHGREARFPFLDEGVVGYIRSLPLLDVCNMEEPVGVGDKKILREVAGHLGLDSCRTLPKRAIQFGSRIAQHCARHTLGSHRRGSGTDPALAVL 552
+++ + G L EM D R+W RNLGRDDRC++DHG+EARFPFLDE VV + +LPL DV NMEEP G G+KK+LR+VA LGL S +LPKRAIQFGSRIA+ R GS+R + + VL
Sbjct: 586 RTKFKQGGWVMLDAEMRLDFNRIWKRNLGRDDRCLSDHGKEARFPFLDEDVVAALLNLPLWDVVNMEEPAGCGEKKVLRQVARLLGLKSASSLPKRAIQFGSRIARESNRKDFGSNRAANLANAGTVVL 714 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11706.1085.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig11706.1085.1 >prot_S-dermatodea_contig11706.1085.1 ID=prot_S-dermatodea_contig11706.1085.1|Name=mRNA_S-dermatodea_contig11706.1085.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=128bp MAGAAALSDEMVKDQGRLWTRNLGRDDRCIADHGREARFPFLDEGVVGYIback to top mRNA from alignment at S-dermatodea_contig11706:404..2318+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig11706.1085.1 ID=mRNA_S-dermatodea_contig11706.1085.1|Name=mRNA_S-dermatodea_contig11706.1085.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=1915bp|location=Sequence derived from alignment at S-dermatodea_contig11706:404..2318+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig11706:404..2318+ >mRNA_S-dermatodea_contig11706.1085.1 ID=mRNA_S-dermatodea_contig11706.1085.1|Name=mRNA_S-dermatodea_contig11706.1085.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=768bp|location=Sequence derived from alignment at S-dermatodea_contig11706:404..2318+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |