prot_S-dermatodea_contig11649.1050.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig11649.1050.1
Unique Nameprot_S-dermatodea_contig11649.1050.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length261
Homology
BLAST of mRNA_S-dermatodea_contig11649.1050.1 vs. uniprot
Match: D8LMF5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMF5_ECTSI)

HSP 1 Score: 231 bits (590), Expect = 3.440e-72
Identity = 113/148 (76.35%), Postives = 126/148 (85.14%), Query Frame = 0
Query:  105 YGGSGEGYQVPGGGGSGANPGDVTPPWTPRSAVSDGFGEGVPRLNTVFLTGYLGQDPKPRYFDSGKVVLNLSLAVKREYHPIERKALGVVYGEEETDWFQLEMWNRDAEYAAKVCKKGGRVGVTGALNINEWTDRDGNPRTTVKILVR 252
            YGG GEG ++PGG G  ++ G  +P    RS  SDGF EGVPRLN VFLTGYLGQDPKP+YFDSG+VVLNLSLAVKREYHP+ERKALG+V GEEETDWFQLEMWNRDAEYAAKVCKKGGRVGVTG L++  W DR+GN RTTVKILV+
Sbjct:    7 YGGGGEGREMPGGYGYSSSSGGASPGGYQRS-FSDGFDEGVPRLNMVFLTGYLGQDPKPKYFDSGRVVLNLSLAVKREYHPLERKALGIVQGEEETDWFQLEMWNRDAEYAAKVCKKGGRVGVTGGLSLQSWIDREGNDRTTVKILVQ 153          
BLAST of mRNA_S-dermatodea_contig11649.1050.1 vs. uniprot
Match: A0A835ZAA6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAA6_9STRA)

HSP 1 Score: 163 bits (413), Expect = 4.740e-46
Identity = 74/116 (63.79%), Postives = 90/116 (77.59%), Query Frame = 0
Query:  136 AVSDGFGEGVPRLNTVFLTGYLGQDPKPRYFDSGKVVLNLSLAVKREYHPIERKALGVVYGEEETDWFQLEMWNRDAEYAAKVCKKGGRVGVTGALNINEWTDRDGNPRTTVKILV 251
            A S GF E +P+LN V LTG LGQDP  RYFD GK V+ LSLAVKREYH +ERKA+G+ YGEEETDWFQLE+W+R+AEYA KV  KG RVG+ G+L I+ W D++G  R T K++V
Sbjct:   75 AASSGFAESIPKLNAVLLTGRLGQDPVARYFDDGKCVVQLSLAVKREYHALERKAMGIRYGEEETDWFQLELWSREAEYAMKVAAKGLRVGIEGSLVIDCWEDQEGEERATAKVIV 190          
BLAST of mRNA_S-dermatodea_contig11649.1050.1 vs. uniprot
Match: A0A7R9W4H7_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W4H7_9STRA)

HSP 1 Score: 155 bits (393), Expect = 5.820e-43
Identity = 71/118 (60.17%), Postives = 90/118 (76.27%), Query Frame = 0
Query:  136 AVSDGFGEGVPRLNTVFLTGYLGQDPKPRYFDSGKVVLNLSLAVKREYHPIERKALGVVYGEEETDWFQLEMWNRDAEYAAKVCKKGGRVGVTGALNINEWTDRD-GNPRTTVKILVR 252
            A S  F + +PRLN V L+G +G DP+PRYFD GKVVLNLSLAV+R+YHP+ERK   + YGEEETDWF LE+W RDAE+A+    KG R+G+TG+L ++ W DR+ G PRT  KILV+
Sbjct:   95 AASSPFEDHIPRLNIVTLSGRVGNDPEPRYFDDGKVVLNLSLAVQRKYHPLERKVRNIKYGEEETDWFPLELWGRDAEFASNFVDKGARIGITGSLMMDSWEDRNTGEPRTKHKILVK 212          
BLAST of mRNA_S-dermatodea_contig11649.1050.1 vs. uniprot
Match: A0A7S2SIA7_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2SIA7_9STRA)

HSP 1 Score: 151 bits (381), Expect = 4.580e-41
Identity = 93/222 (41.89%), Postives = 120/222 (54.05%), Query Frame = 0
Query:   32 DVVTALVLLPVVHCFCPIGGIRPSSTFTTHDIKHDMIPAATLPRWASVRGRPQAADERFGSQGVPLRMSQAPGYGGSGEGYQVPGGGGSGANPGDVTPPWTPRSAVSDGFGEGVPRLNTVFLTGYLGQDPKPRYFDSGKVVLNLSLAVKREYHPIERKALGVVYGEEETDWFQLEMWNRDAEYAAKVCKKGGRVGVTGALNINEWTDRD-GNPRTTVKILVR 252
            DV T  VL+ V H F        S    +  I H  +  +TLP   ++         RF + G               + +++P    + AN  D T       A +  F E +PR+N+V L G +GQDP P+Y D GKVVLNLSLAVKR+YHP+ER    +  GEEETDWF LE+W RDAEYA+K   KG R+ VTG L I+ WTDR+ G PR   KI+VR
Sbjct:   20 DVTTLFVLIAVTHSF--------SQNVNSFVIPHGFLFGSTLPI-ITIPSSSSRISSRFMTGGDFFS-----------DDFELP----TEANDDDETS--DEEFAEASEFEEHIPRVNSVTLVGRVGQDPDPKYLDDGKVVLNLSLAVKRKYHPLERNVRNIKSGEEETDWFPLEIWGRDAEYASKYVDKGSRMMVTGTLQIDTWTDRNTGEPRKKAKIIVR 215          
BLAST of mRNA_S-dermatodea_contig11649.1050.1 vs. uniprot
Match: A0A7S1YYF7_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1YYF7_TRICV)

HSP 1 Score: 150 bits (379), Expect = 5.310e-41
Identity = 67/116 (57.76%), Postives = 87/116 (75.00%), Query Frame = 0
Query:  138 SDGFGEGVPRLNTVFLTGYLGQDPKPRYFDSGKVVLNLSLAVKREYHPIERKALGVVYGEEETDWFQLEMWNRDAEYAAKVCKKGGRVGVTGALNINEWTDRD-GNPRTTVKILVR 252
            S  F + +PRLN V L+G +G DP+PRYFD GKVVLNLSLA KR+YHP+ERK   + YGEEETDW+ LEMW RDAE+ +K   KG R+G+TG+L ++ W D++ G PR+  KI V+
Sbjct:  100 SSEFEDHIPRLNIVTLSGRVGNDPEPRYFDDGKVVLNLSLACKRKYHPLERKVRNIKYGEEETDWWPLEMWGRDAEFVSKYVNKGARIGITGSLTMDSWVDKNTGEPRSKYKIQVK 215          
BLAST of mRNA_S-dermatodea_contig11649.1050.1 vs. uniprot
Match: A0A7S2USN2_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2USN2_9STRA)

HSP 1 Score: 144 bits (362), Expect = 6.380e-39
Identity = 68/120 (56.67%), Postives = 90/120 (75.00%), Query Frame = 0
Query:  135 SAVSDGFGEGVPRLNTVFLTGYLGQDP-KPRYFDSGKVVLNLSLAVKREYHPIERKALGVVYGEEETDWFQLEMWNRDAEYAAKVCKKGGRVGVTGALNINEWTDR-DGNPRTTVKILVR 252
            S +S  F + +P+ N V L+G +G    +P+YFD GKVVL+LSLAVKR+YHP+ER+A  +  G+EETDWF LE+W RDAEYAAK  +KG R+GVTG+L ++ WTDR  G PR+  KILV+
Sbjct:   30 SDLSGPFADHIPKFNVVTLSGRVGNPQLEPKYFDDGKVVLSLSLAVKRKYHPLERRAYNIKSGDEETDWFALEIWGRDAEYAAKYVEKGSRIGVTGSLVVDNWTDRATGEPRSRPKILVK 149          
BLAST of mRNA_S-dermatodea_contig11649.1050.1 vs. uniprot
Match: A0A7S1ZHN3_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZHN3_9STRA)

HSP 1 Score: 144 bits (364), Expect = 2.220e-38
Identity = 65/113 (57.52%), Postives = 84/113 (74.34%), Query Frame = 0
Query:  141 FGEGVPRLNTVFLTGYLGQDPKPRYFDSGKVVLNLSLAVKREYHPIERKALGVVYGEEETDWFQLEMWNRDAEYAAKVCKKGGRVGVTGALNINEWTDRD-GNPRTTVKILVR 252
            F   +P+LN V L+G +G  P+PRYFD GKVVLN+ LAVKR+YHP+ERK   + YG+EETDWF LE+W RDAE+AA+   KG R+G+TG+L I+ WTD+  G  R   KI+VR
Sbjct:  109 FEPHIPKLNVVTLSGRVGNVPEPRYFDDGKVVLNMGLAVKRKYHPLERKVKNIQYGQEETDWFNLELWGRDAEFAARFVDKGSRIGITGSLAIDSWTDKQTGQYRRKPKIVVR 221          
BLAST of mRNA_S-dermatodea_contig11649.1050.1 vs. uniprot
Match: A0A1Z5KE78_FISSO (Single-strand DNA-binding protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KE78_FISSO)

HSP 1 Score: 141 bits (356), Expect = 9.800e-38
Identity = 63/118 (53.39%), Postives = 88/118 (74.58%), Query Frame = 0
Query:  136 AVSDGFGEGVPRLNTVFLTGYLGQDPKPRYFDSGKVVLNLSLAVKREYHPIERKALGVVYGEEETDWFQLEMWNRDAEYAAKVCKKGGRVGVTGALNINEWTDRD-GNPRTTVKILVR 252
            A +  + + V R NTV L+G +G +PK RYFD GKVV+NL+LAV+R+YHP+ERK   + YG+EETDWF LE+W R AE+A+K   KG RV V G+L +++WTD++ G PR+  K++VR
Sbjct:   67 AQNPDWDDTVARFNTVHLSGRIGAEPKTRYFDDGKVVVNLNLAVQRKYHPLERKHFNIAYGQEETDWFGLEIWGRTAEFASKYVDKGMRVSVIGSLQVDQWTDKESGEPRSRTKVVVR 184          
BLAST of mRNA_S-dermatodea_contig11649.1050.1 vs. uniprot
Match: A0A7S2UQ80_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UQ80_9STRA)

HSP 1 Score: 144 bits (362), Expect = 1.070e-37
Identity = 68/120 (56.67%), Postives = 90/120 (75.00%), Query Frame = 0
Query:  135 SAVSDGFGEGVPRLNTVFLTGYLGQDP-KPRYFDSGKVVLNLSLAVKREYHPIERKALGVVYGEEETDWFQLEMWNRDAEYAAKVCKKGGRVGVTGALNINEWTDR-DGNPRTTVKILVR 252
            S +S  F + +P+ N V L+G +G    +P+YFD GKVVL+LSLAVKR+YHP+ER+A  +  G+EETDWF LE+W RDAEYAAK  +KG R+GVTG+L ++ WTDR  G PR+  KILV+
Sbjct:  139 SDLSGPFADHIPKFNVVTLSGRVGNPQLEPKYFDDGKVVLSLSLAVKRKYHPLERRAYNIKSGDEETDWFALEIWGRDAEYAAKYVEKGSRIGVTGSLVVDNWTDRATGEPRSRPKILVK 258          
BLAST of mRNA_S-dermatodea_contig11649.1050.1 vs. uniprot
Match: B8C9K7_THAPS (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C9K7_THAPS)

HSP 1 Score: 136 bits (342), Expect = 6.310e-37
Identity = 63/113 (55.75%), Postives = 79/113 (69.91%), Query Frame = 0
Query:  141 FGEGVPRLNTVFLTGYLGQDPKPRYFDSGKVVLNLSLAVKREYHPIERKALGVVYGEEETDWFQLEMWNRDAEYAAKVCKKGGRVGVTGALNINEWTDR-DGNPRTTVKILVR 252
            F E +P+LN V L G +G  P P+YFD GKVVLNLS+AVKR+YHP+ERK   +  GEEETDWF LE W RDAEY     +KG R+G+TG+L ++ W D+  G  R   KI+VR
Sbjct:    6 FDEHLPKLNVVTLVGRVGGTPDPKYFDDGKVVLNLSVAVKRKYHPLERKVRNIRSGEEETDWFPLEFWGRDAEYVTNYVEKGARIGITGSLVMDGWVDKMTGEQRRRPKIVVR 118          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11649.1050.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LMF5_ECTSI3.440e-7276.35Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZAA6_9STRA4.740e-4663.79Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7R9W4H7_9STRA5.820e-4360.17Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A7S2SIA7_9STRA4.580e-4141.89Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7S1YYF7_TRICV5.310e-4157.76Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]
A0A7S2USN2_9STRA6.380e-3956.67Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S1ZHN3_9STRA2.220e-3857.52Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A1Z5KE78_FISSO9.800e-3853.39Single-strand DNA-binding protein n=2 Tax=Fistulif... [more]
A0A7S2UQ80_9STRA1.070e-3756.67Hypothetical protein n=1 Tax=Attheya septentrional... [more]
B8C9K7_THAPS6.310e-3755.75Uncharacterized protein (Fragment) n=1 Tax=Thalass... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000424Primosome PriB/single-strand DNA-bindingPFAMPF00436SSBcoord: 148..251
e-value: 5.3E-22
score: 77.8
IPR000424Primosome PriB/single-strand DNA-bindingPROSITEPS50935SSBcoord: 148..258
score: 22.523
IPR011344Single-stranded DNA-binding proteinTIGRFAMTIGR00621TIGR00621coord: 148..251
e-value: 2.4E-23
score: 81.2
IPR011344Single-stranded DNA-binding proteinPANTHERPTHR10302SINGLE-STRANDED DNA-BINDING PROTEINcoord: 148..250
IPR011344Single-stranded DNA-binding proteinHAMAPMF_00984SSBcoord: 148..258
score: 22.066
NoneNo IPR availableGENE3D2.40.50.140coord: 146..257
e-value: 3.3E-27
score: 97.3
NoneNo IPR availablePANTHERPTHR10302:SF10SINGLE-STRANDED DNA-BINDING PROTEINcoord: 148..250
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 148..252

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig11649contigS-dermatodea_contig11649:1069..7403 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig11649.1050.1mRNA_S-dermatodea_contig11649.1050.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig11649 1069..7403 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig11649.1050.1 ID=prot_S-dermatodea_contig11649.1050.1|Name=mRNA_S-dermatodea_contig11649.1050.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=261bp
MGSEPITDLPSHHLSSLPGALHSTMLWRNRRDVVTALVLLPVVHCFCPIG
GIRPSSTFTTHDIKHDMIPAATLPRWASVRGRPQAADERFGSQGVPLRMS
QAPGYGGSGEGYQVPGGGGSGANPGDVTPPWTPRSAVSDGFGEGVPRLNT
VFLTGYLGQDPKPRYFDSGKVVLNLSLAVKREYHPIERKALGVVYGEEET
DWFQLEMWNRDAEYAAKVCKKGGRVGVTGALNINEWTDRDGNPRTTVKIL
VRCGGGWGWG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000424Primosome_PriB/ssb
IPR011344ssDNA-bd
IPR012340NA-bd_OB-fold