prot_S-dermatodea_contig11640.1044.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig11640.1044.1
Unique Nameprot_S-dermatodea_contig11640.1044.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length297
Homology
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BLAST of mRNA_S-dermatodea_contig11640.1044.1 vs. uniprot
Match: D8LDU5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDU5_ECTSI)

HSP 1 Score: 90.9 bits (224), Expect = 2.990e-19
Identity = 42/94 (44.68%), Postives = 57/94 (60.64%), Query Frame = 0 
Query:   44 AEECSREALDPAKRHELDLYDKDVFIDRTCSERSIDPVNHCNMFDIGQNCRGCFTTCTGAIRYMNDFRGEYEVVG-DDLFKFCPEAEVDFFGEC 136
            AEEC   +L  A + +L +YDKD++++  C   +     HCN   +GQ CRGCF TC GA RY++DF  E  V G D +  FCP+AEV+   EC
Sbjct:   22 AEECIVSSLSDAAQEQLSMYDKDLYLEPDCVNGASPMPVHCNYMGLGQECRGCFMTCDGATRYLDDFAEEISVWGVDAIVHFCPDAEVELLEEC 115
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BLAST of mRNA_S-dermatodea_contig11640.1044.1 vs. uniprot
Match: D8LDU6_ECTSI (N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDU6_ECTSI)

HSP 1 Score: 76.6 bits (187), Expect = 6.130e-12
Identity = 36/94 (38.30%), Postives = 53/94 (56.38%), Query Frame = 0 
Query:   44 AEECSREALDPAKRHELDLYDKDVFIDRTCSERSIDPVNHCNMFDIGQNCRGCFTTCTGAIRYMNDFRGEYEVVGDD-LFKFCPEAEVDFFGEC 136
            A  CS ++L+ A + +L LYD D++++  C   S      CN   +GQ CRGCF TC GA+ Y++D        G+D +  FCP++EV    EC
Sbjct:  581 APSCSMDSLNDADQQQLALYDNDMYLEDDCVNDSTPLPLGCNYMGLGQECRGCFLTCAGALTYIDDKAEHILEYGEDAVINFCPQSEVSDLAEC 674
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11640.1044.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LDU5_ECTSI2.990e-1944.68Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LDU6_ECTSI6.130e-1238.30N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepI... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR01217PRICHEXTENSNcoord: 227..244
score: 37.78
coord: 182..203
score: 30.91
coord: 141..157
score: 35.29
coord: 246..271
score: 36.15

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig11640contigS-dermatodea_contig11640:358..4642 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig11640.1044.1mRNA_S-dermatodea_contig11640.1044.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig11640 356..4642 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig11640.1044.1 ID=prot_S-dermatodea_contig11640.1044.1|Name=mRNA_S-dermatodea_contig11640.1044.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=297bp
THILPPSDPVPSPAVGQLGLSCTMRTAQSLVWLALLSRAAAQNAEECSRE
ALDPAKRHELDLYDKDVFIDRTCSERSIDPVNHCNMFDIGQNCRGCFTTC
TGAIRYMNDFRGEYEVVGDDLFKFCPEAEVDFFGECEGSAPTTPAPTTIV
ISALPDSGFSDDNGEDFSYPFADSEDEEDVLPVPGPAPASADAPVYVPDV
APVRDEEEPESMSYSFYFDEDFMAPSPVPAPTEDVSPKPTAPVRAPAAHP
MAAPPTSGDGMPPARPPAAAPTEDVSPKPSAPVASPVAAPAKAPVAA
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