prot_S-dermatodea_contig1164.1042.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig1164.1042.1
Unique Nameprot_S-dermatodea_contig1164.1042.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length281
Homology
BLAST of mRNA_S-dermatodea_contig1164.1042.1 vs. uniprot
Match: D8LEC2_ECTSI (Putative NIN-like transcription factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEC2_ECTSI)

HSP 1 Score: 214 bits (545), Expect = 6.020e-62
Identity = 123/183 (67.21%), Postives = 138/183 (75.41%), Query Frame = 0
Query:   41 GRAGRAPTNRRSRSNVSV----------GPPPRLSIPDEPPKVPRRPPSKGNKRETLADIAKRIPIQLMRQYFNYPLRSAAEAMFISVTTLKRLCRRHGVKRWPHRQISGINRALSDLEAQHQIGDGDGDVDAAVADQLRQLHRRREVIIELAFESDEET--SHPDDAPPVAHKREHRNSVST 211
            G  GR P NR S  N ++          G PPRL+IP EPPKVPRR PSKGNKRETLADIAKRIP+ LMR YFNYPLR+AAEAM ISVTTLKRLCRRHGVKRWPHRQI GINR L+DLE QH    GD +VD+ VADQLRQL+RRR+VIIELAFESD+E+  +  DDAPP   K   R S ++
Sbjct:   43 GTRGRPPANRASCGNSTIPDITVRSPADGLPPRLAIPHEPPKVPRRTPSKGNKRETLADIAKRIPVGLMRHYFNYPLRAAAEAMDISVTTLKRLCRRHGVKRWPHRQICGINRTLNDLETQHDTAKGD-EVDS-VADQLRQLYRRRDVIIELAFESDDESISNGSDDAPPAGRKLSKRGSFTS 223          
BLAST of mRNA_S-dermatodea_contig1164.1042.1 vs. uniprot
Match: A0A6H5K716_9PHAE (RWP-RK domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K716_9PHAE)

HSP 1 Score: 201 bits (511), Expect = 5.090e-57
Identity = 113/162 (69.75%), Postives = 127/162 (78.40%), Query Frame = 0
Query:   39 SGGRAGRAPTNRRSRSNVSV----------GPPPRLSIPDEPPKVPRRPPSKGNKRETLADIAKRIPIQLMRQYFNYPLRSAAEAMFISVTTLKRLCRRHGVKRWPHRQISGINRALSDLEAQHQIGDGDGDVDAAVADQLRQLHRRREVIIELAFESDEET 190
            S G  G+   NR S  N ++          G P RL+IP EPPKVPRR PSKGNKRETLADIAKRIP++LMR YFNYPLR+AAEAM ISVTTLKRLCRRHGVKRWPHRQI GINR L+DLE QH    GD +VD+ VA+QLRQLHRRR+VIIELAFESD+E+
Sbjct:   53 SSGTRGQPSANRASCENSTIPDITVRSPADGLPHRLTIPHEPPKVPRRTPSKGNKRETLADIAKRIPVELMRHYFNYPLRAAAEAMDISVTTLKRLCRRHGVKRWPHRQICGINRTLNDLETQHDTAKGD-EVDS-VAEQLRQLHRRRDVIIELAFESDDES 212          
BLAST of mRNA_S-dermatodea_contig1164.1042.1 vs. uniprot
Match: D7FN15_ECTSI (Putative NIN-like transcription factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN15_ECTSI)

HSP 1 Score: 182 bits (463), Expect = 3.100e-53
Identity = 101/146 (69.18%), Postives = 117/146 (80.14%), Query Frame = 0
Query:   63 RLSIPDEPPKVPRRPPSK-GNKRETLADIAKRIPIQLMRQYFNYPLRSAAEAMFISVTTLKRLCRRHGVKRWPHRQISGINRALSDLEAQHQIGDGDGDVDAAVADQLRQLHRRREVIIELAFESDEETSHPDD----APPVAHKR 203
            RL IPDEPP +P R  SK G+KRE LADIAKRIP++LMR+YFNYPLR +AEAM ISVTTLKRLCRRHGVKRWPHRQISG+NR L DLEAQH    G+ ++ AAV ++LRQLHRRREVIIE AFESD+E++   D    +P V  KR
Sbjct:   36 RLRIPDEPPTLPPRDVSKAGSKREVLADIAKRIPVELMREYFNYPLRVSAEAMHISVTTLKRLCRRHGVKRWPHRQISGLNRTLGDLEAQHDAARGEEEI-AAVEEELRQLHRRREVIIERAFESDDESTRNKDGAHLSPGVRRKR 180          
BLAST of mRNA_S-dermatodea_contig1164.1042.1 vs. uniprot
Match: A0A6H5KFL8_9PHAE (RWP-RK domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFL8_9PHAE)

HSP 1 Score: 184 bits (468), Expect = 8.380e-50
Identity = 102/146 (69.86%), Postives = 118/146 (80.82%), Query Frame = 0
Query:   63 RLSIPDEPPKVPRRPPSK-GNKRETLADIAKRIPIQLMRQYFNYPLRSAAEAMFISVTTLKRLCRRHGVKRWPHRQISGINRALSDLEAQHQIGDGDGDVDAAVADQLRQLHRRREVIIELAFESDEETSHPDD----APPVAHKR 203
            RL IPDEPP +P R  SK G+KRE LADIAKRIP++LMR+YFNYPLR +AEAM ISVTTLKRLCRRHGVKRWPHRQISG+NRAL DLEAQH    G+ ++ AAV ++LRQLHRRREVIIE AFESD+E++   D    +P V  KR
Sbjct:   37 RLRIPDEPPTLPPRDVSKAGSKREVLADIAKRIPVELMREYFNYPLRVSAEAMHISVTTLKRLCRRHGVKRWPHRQISGLNRALGDLEAQHDAARGEEEI-AAVEEELRQLHRRREVIIERAFESDDESTRDKDCAHLSPGVRRKR 181          
BLAST of mRNA_S-dermatodea_contig1164.1042.1 vs. uniprot
Match: A0A6H5JLN8_9PHAE (RWP-RK domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLN8_9PHAE)

HSP 1 Score: 162 bits (411), Expect = 1.490e-41
Identity = 88/128 (68.75%), Postives = 105/128 (82.03%), Query Frame = 0
Query:   63 RLSIPDEPPKVPRRPPSKGNKRETLADIAKRIPIQLMRQYFNYPLRSAAEAMFISVTTLKRLCRRHGVKRWPHRQISGINRALSDLEAQH-QIGDGDGDV---DAAVADQLRQLHRRREVIIELAFES 186
            RL IP+ PP VPRRPPSKGNKRETL DIA RIP+ +MR YFNYPLR+AAEAM ISVTTLKRLCRRHGVKRWPHRQISGINRA++ LE Q  Q G  + ++   +  V++Q+++L RRR+V+IE AFES
Sbjct:  990 RLFIPETPPVVPRRPPSKGNKRETLGDIALRIPVTVMRPYFNYPLRTAAEAMNISVTTLKRLCRRHGVKRWPHRQISGINRAMAHLEFQQDQAGRRNSEITIRNNQVSEQMQELLRRRQVMIEHAFES 1117          
BLAST of mRNA_S-dermatodea_contig1164.1042.1 vs. uniprot
Match: D8LNV2_ECTSI (Putative NIN-like transcription factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNV2_ECTSI)

HSP 1 Score: 146 bits (368), Expect = 7.230e-36
Identity = 73/89 (82.02%), Postives = 79/89 (88.76%), Query Frame = 0
Query:   63 RLSIPDEPPKVPRRPPSKGNKRETLADIAKRIPIQLMRQYFNYPLRSAAEAMFISVTTLKRLCRRHGVKRWPHRQISGINRALSDLEAQ 151
            RL IP+ PP VPRRPPSKGNKRETL DIA RIP+ +MR YFNYPLR+AAEAM ISVTTLKRLCRRHGVKRWPHRQISGINRA++ LE Q
Sbjct:  764 RLFIPETPPVVPRRPPSKGNKRETLGDIAHRIPVTVMRPYFNYPLRTAAEAMNISVTTLKRLCRRHGVKRWPHRQISGINRAMAHLEFQ 852          
BLAST of mRNA_S-dermatodea_contig1164.1042.1 vs. uniprot
Match: A0A6H5L9C1_9PHAE (RWP-RK domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9C1_9PHAE)

HSP 1 Score: 139 bits (350), Expect = 4.760e-34
Identity = 77/145 (53.10%), Postives = 106/145 (73.10%), Query Frame = 0
Query:   53 RSNVSVGPPPRLSIPDEPPKVPRRPPSKGNKRETLADIAKRIPIQLMRQYFNYPLRSAAEAMFISVTTLKRLCRRHGVKRWPHRQISGINRALSDLEAQHQIGDGDGDVDAAVADQLRQLHRRREVIIELAFESDEETSHPDDAP 197
            +SN S  P   L++P  P K+ R+PP KG +RETL DIA+R+P++++  YFN+ LR+AA+AM ISVT+LKRLCRRHGVKRWPHRQ+SG+NR +S LE + Q    D D+    A QL +L+ RR+ +I+LAF SD+ +S  + AP
Sbjct:   16 QSNASRTP---LNLPKTPRKLARQPPLKGTRRETLQDIARRVPVEVLLPYFNFSLRTAADAMCISVTSLKRLCRRHGVKRWPHRQLSGLNRTVSHLE-ERQATSNDPDI----ARQLARLYCRRDEVIDLAFTSDDNSSELERAP 152          
BLAST of mRNA_S-dermatodea_contig1164.1042.1 vs. uniprot
Match: A0A835Z7T4_9STRA (RWP-RK domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7T4_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 2.540e-18
Identity = 41/102 (40.20%), Postives = 71/102 (69.61%), Query Frame = 0
Query:   82 NKRETLADIAKRIPIQLMRQYFNYPLRSAAEAMFISVTTLKRLCRRHGVKRWPHRQISGINRALSDLEAQHQIGDGDGDVDAAVADQLRQLHRRREVIIELA 183
            +KR+T  ++AKR+P+ ++ ++++ PL  AA  + +S+T LK+LCR++G+KRWPHRQ+S +N++L  LE +  +G  D    AA+  +   L  +RE+II+ A
Sbjct:    1 SKRQTSEEVAKRLPVSVLEEFYHVPLNIAARELSVSLTMLKKLCRQYGIKRWPHRQVSSLNKSLGKLE-EKILGASDDKAAAALRAKAGPLRTKRELIIKTA 101          
BLAST of mRNA_S-dermatodea_contig1164.1042.1 vs. uniprot
Match: D7FS12_ECTSI (Putative NIN-like transcription factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS12_ECTSI)

HSP 1 Score: 83.2 bits (204), Expect = 3.110e-14
Identity = 40/101 (39.60%), Postives = 68/101 (67.33%), Query Frame = 0
Query:   83 KRETLADIAKRIPIQLMRQYFNYPLRSAAEAMFISVTTLKRLCRRHGVKRWPHRQISGINRALSDLEAQHQIGDGDGDVDAAVADQLRQLHRRREVIIELA 183
            KR+T  D+A R+P++++  +++ PL  AA+ + +S+T LK+LCR +GVKRWPHRQ+S +++  S LE + +     G    ++  +L Q  +RR+VII+ A
Sbjct:  464 KRQTSEDVAARLPLEVLECFYHVPLNVAAQQLNVSLTMLKKLCRAYGVKRWPHRQVSSLDKTTSKLEDKIKTRRDGGKDAPSLVRKLTQARKRRKVIIKTA 564          
BLAST of mRNA_S-dermatodea_contig1164.1042.1 vs. uniprot
Match: A0A6H5KE17_9PHAE (RWP-RK domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE17_9PHAE)

HSP 1 Score: 83.2 bits (204), Expect = 3.410e-14
Identity = 40/101 (39.60%), Postives = 68/101 (67.33%), Query Frame = 0
Query:   83 KRETLADIAKRIPIQLMRQYFNYPLRSAAEAMFISVTTLKRLCRRHGVKRWPHRQISGINRALSDLEAQHQIGDGDGDVDAAVADQLRQLHRRREVIIELA 183
            KR+T  D+A R+P++++  +++ PL  AA+ + +S+T LK+LCR +GVKRWPHRQ+S +++  S LE + +     G    ++  +L Q  +RR+VII+ A
Sbjct:  464 KRQTSEDVAARLPLEVLECFYHVPLNVAAQQLNVSLTMLKKLCRAYGVKRWPHRQVSSLDKTTSKLEDKIKARRDGGKDAPSLVRKLTQARKRRKVIIKTA 564          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1164.1042.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEC2_ECTSI6.020e-6267.21Putative NIN-like transcription factor n=1 Tax=Ect... [more]
A0A6H5K716_9PHAE5.090e-5769.75RWP-RK domain-containing protein n=1 Tax=Ectocarpu... [more]
D7FN15_ECTSI3.100e-5369.18Putative NIN-like transcription factor n=1 Tax=Ect... [more]
A0A6H5KFL8_9PHAE8.380e-5069.86RWP-RK domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6H5JLN8_9PHAE1.490e-4168.75RWP-RK domain-containing protein n=1 Tax=Ectocarpu... [more]
D8LNV2_ECTSI7.230e-3682.02Putative NIN-like transcription factor n=1 Tax=Ect... [more]
A0A6H5L9C1_9PHAE4.760e-3453.10RWP-RK domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A835Z7T4_9STRA2.540e-1840.20RWP-RK domain-containing protein (Fragment) n=1 Ta... [more]
D7FS12_ECTSI3.110e-1439.60Putative NIN-like transcription factor n=1 Tax=Ect... [more]
A0A6H5KE17_9PHAE3.410e-1439.60RWP-RK domain-containing protein n=1 Tax=Ectocarpu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003035RWP-RK domainPFAMPF02042RWP-RKcoord: 98..139
e-value: 6.3E-17
score: 61.3
IPR003035RWP-RK domainPROSITEPS51519RWP_RKcoord: 77..161
score: 17.53
NoneNo IPR availablePANTHERPTHR46373FAMILY NOT NAMEDcoord: 33..182

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig1164contigS-dermatodea_contig1164:4701..9507 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig1164.1042.1mRNA_S-dermatodea_contig1164.1042.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig1164 4700..9507 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig1164.1042.1 ID=prot_S-dermatodea_contig1164.1042.1|Name=mRNA_S-dermatodea_contig1164.1042.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=281bp
GLKITPTEWHAAEFIFGCDASGSVIAKSSNSNSNSSSMSGGRAGRAPTNR
RSRSNVSVGPPPRLSIPDEPPKVPRRPPSKGNKRETLADIAKRIPIQLMR
QYFNYPLRSAAEAMFISVTTLKRLCRRHGVKRWPHRQISGINRALSDLEA
QHQIGDGDGDVDAAVADQLRQLHRRREVIIELAFESDEETSHPDDAPPVA
HKREHRNSVSTDCSSSSGSTSSNSSMASASSRSRSGSIASAPESPCSTAS
LNDTAPTSVWWHHTPREDCASAGAGSIGAAG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003035RWP-RK_dom