mRNA_S-dermatodea_contig11638.1041.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig11638.1041.1
Unique NamemRNA_S-dermatodea_contig11638.1041.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
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BLAST of mRNA_S-dermatodea_contig11638.1041.1 vs. uniprot
Match: F8PHN3_SERL3 (ULP_PROTEASE domain-containing protein n=1 Tax=Serpula lacrymans var. lacrymans (strain S7.3) TaxID=936435 RepID=F8PHN3_SERL3)

HSP 1 Score: 49.7 bits (117), Expect = 2.220e-5
Identity = 23/44 (52.27%), Postives = 29/44 (65.91%), Query Frame = 1 
Query:   34 QTNGSDCGVFACQFAAALTAGLHPLFDFTQDDIYCMRERMMYPL 165
            Q NGSDCGVF CQF A+L  G    F FTQ D+  +R RM++ +
Sbjct:  251 QENGSDCGVFTCQFLASLARG-EESFRFTQQDMLYLRRRMIWEI 293
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BLAST of mRNA_S-dermatodea_contig11638.1041.1 vs. uniprot
Match: F8NF93_SERL9 (ULP_PROTEASE domain-containing protein n=1 Tax=Serpula lacrymans var. lacrymans (strain S7.9) TaxID=578457 RepID=F8NF93_SERL9)

HSP 1 Score: 49.7 bits (117), Expect = 2.310e-5
Identity = 23/44 (52.27%), Postives = 29/44 (65.91%), Query Frame = 1 
Query:   34 QTNGSDCGVFACQFAAALTAGLHPLFDFTQDDIYCMRERMMYPL 165
            Q NGSDCGVF CQF A+L  G    F FTQ D+  +R RM++ +
Sbjct:  363 QENGSDCGVFTCQFLASLARG-EESFRFTQQDMLYLRRRMIWEI 405
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BLAST of mRNA_S-dermatodea_contig11638.1041.1 vs. uniprot
Match: A0A2R5LHR6_9ACAR (Putative protease ulp1 family (Fragment) n=1 Tax=Ornithodoros turicata TaxID=34597 RepID=A0A2R5LHR6_9ACAR)

HSP 1 Score: 48.9 bits (115), Expect = 4.360e-5
Identity = 20/47 (42.55%), Postives = 32/47 (68.09%), Query Frame = 1 
Query:   34 QTNGSDCGVFACQFAAALTAGLHPLFDFTQDDIYCMRERMMYPLISK 174
            Q NGSDCG+F CQ+A  ++ G   + +F+Q D+  +R RM+Y ++ K
Sbjct:  442 QKNGSDCGMFVCQYAECISRGA--IINFSQQDMPYLRRRMVYEILHK 486
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BLAST of mRNA_S-dermatodea_contig11638.1041.1 vs. uniprot
Match: A0A0L0FWX2_9EUKA (ULP_PROTEASE domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FWX2_9EUKA)

HSP 1 Score: 48.5 bits (114), Expect = 5.830e-5
Identity = 24/55 (43.64%), Postives = 33/55 (60.00%), Query Frame = 1 
Query:   34 QTNGSDCGVFACQFAAALTAG-----LHPLFDFTQDDIYCMRERMMYPLISKRAV 183
            Q NGSDCGVFACQF+   + G     L  +FDF Q+ +   R RM + ++ KR +
Sbjct:  274 QDNGSDCGVFACQFSEYRSRGSSGIPLGQIFDFGQEQMPYFRLRMAHEILEKRLM 328
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BLAST of mRNA_S-dermatodea_contig11638.1041.1 vs. uniprot
Match: A0A401G7J0_9APHY (Sentrin-specific protease 1 n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401G7J0_9APHY)

HSP 1 Score: 48.1 bits (113), Expect = 8.210e-5
Identity = 23/44 (52.27%), Postives = 30/44 (68.18%), Query Frame = 1 
Query:   34 QTNGSDCGVFACQFAAALTAGLHPLFDFTQDDIYCMRERMMYPL 165
            Q NGSDCGVFACQF  +L+ G    F FTQ D+  +R RM++ +
Sbjct:  547 QENGSDCGVFACQFMESLSRG-QETFVFTQADMPYLRRRMIWEI 589
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BLAST of mRNA_S-dermatodea_contig11638.1041.1 vs. uniprot
Match: A0A7S2ZI63_9RHOD (Hypothetical protein n=5 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZI63_9RHOD)

HSP 1 Score: 48.1 bits (113), Expect = 8.230e-5
Identity = 23/49 (46.94%), Postives = 31/49 (63.27%), Query Frame = 1 
Query:   34 QTNGSDCGVFACQFAAALTAGLHPLFDFTQDDIYCMRERMMYPLISKRA 180
            QTNG DCG+FAC+FA     G    FDF  +D+   R R++  L++KRA
Sbjct:  621 QTNGDDCGIFACKFADYYAQG--KAFDFGTEDMGYFRMRIVAELLAKRA 667
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BLAST of mRNA_S-dermatodea_contig11638.1041.1 vs. uniprot
Match: A0A6P8HM34_ACTTE (uncharacterized protein LOC116290747 isoform X1 n=2 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8HM34_ACTTE)

HSP 1 Score: 48.1 bits (113), Expect = 8.260e-5
Identity = 22/40 (55.00%), Postives = 29/40 (72.50%), Query Frame = 1 
Query:   34 QTNGSDCGVFACQFAAALTAGLHPLFDFTQDDIYCMRERM 153
            Q NG+DCGVF CQ+AA +  GL  +FDF Q+DI  +R +M
Sbjct:   25 QDNGTDCGVFVCQYAAHIVQGLQ-IFDFKQEDIPNLRLQM 63
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11638.1041.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
F8PHN3_SERL32.220e-552.27ULP_PROTEASE domain-containing protein n=1 Tax=Ser... [more]
F8NF93_SERL92.310e-552.27ULP_PROTEASE domain-containing protein n=1 Tax=Ser... [more]
A0A2R5LHR6_9ACAR4.360e-542.55Putative protease ulp1 family (Fragment) n=1 Tax=O... [more]
A0A0L0FWX2_9EUKA5.830e-543.64ULP_PROTEASE domain-containing protein n=1 Tax=Sph... [more]
A0A401G7J0_9APHY8.210e-552.27Sentrin-specific protease 1 n=1 Tax=Sparassis cris... [more]
A0A7S2ZI63_9RHOD8.230e-546.94Hypothetical protein n=5 Tax=Rhodosorus marinus Ta... [more]
A0A6P8HM34_ACTTE8.260e-555.00uncharacterized protein LOC116290747 isoform X1 n=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig11638contigS-dermatodea_contig11638:7141..7326 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categorysignal peptide
Exons1
Model size186
Cds size186
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924211.6685305-CDS-S-dermatodea_contig11638:7140..73261622924211.6685305-CDS-S-dermatodea_contig11638:7140..7326Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11638 7141..7326 +
1694079096.2957108-CDS-S-dermatodea_contig11638:7140..73261694079096.2957108-CDS-S-dermatodea_contig11638:7140..7326Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11638 7141..7326 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig11638.1041.1prot_S-dermatodea_contig11638.1041.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig11638 7141..7326 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig11638.1041.1

>prot_S-dermatodea_contig11638.1041.1 ID=prot_S-dermatodea_contig11638.1041.1|Name=mRNA_S-dermatodea_contig11638.1041.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=62bp
TVVVVTGVVLPQTNGSDCGVFACQFAAALTAGLHPLFDFTQDDIYCMRER
MMYPLISKRAV*
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mRNA from alignment at S-dermatodea_contig11638:7141..7326+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig11638.1041.1 ID=mRNA_S-dermatodea_contig11638.1041.1|Name=mRNA_S-dermatodea_contig11638.1041.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=186bp|location=Sequence derived from alignment at S-dermatodea_contig11638:7141..7326+ (Saccorhiza dermatodea SderLu1190fm monoicous)
ACCGTCGTCGTTGTGACCGGTGTTGTTCTTCCGCAGACCAACGGTTCCGA
TTGCGGCGTGTTCGCATGTCAATTCGCCGCCGCCTTGACCGCGGGCCTTC
ATCCACTTTTCGACTTCACCCAAGACGACATCTACTGTATGCGGGAAAGG
ATGATGTACCCTTTGATATCTAAGAGAGCCGTATAG
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Coding sequence (CDS) from alignment at S-dermatodea_contig11638:7141..7326+

>mRNA_S-dermatodea_contig11638.1041.1 ID=mRNA_S-dermatodea_contig11638.1041.1|Name=mRNA_S-dermatodea_contig11638.1041.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=372bp|location=Sequence derived from alignment at S-dermatodea_contig11638:7141..7326+ (Saccorhiza dermatodea SderLu1190fm monoicous)
ACCGTCGTCGTTGTGACCGGTGTTGTTCTTCCGCAGACCAACGGTTCCGA
TTGCGGCGTGTTCGCATGTCAATTCGCCGCCGCCTTGACCGCGGGCCTTC
ATCCACTTTTCGACTTCACCCAAGACGACATCTACTGTATGCGGGAAAGG
ATGATGTACCCTTTGATATCTAAGAGAGCCGTATAGACCGTCGTCGTTGT
GACCGGTGTTGTTCTTCCGCAGACCAACGGTTCCGATTGCGGCGTGTTCG
CATGTCAATTCGCCGCCGCCTTGACCGCGGGCCTTCATCCACTTTTCGAC
TTCACCCAAGACGACATCTACTGTATGCGGGAAAGGATGATGTACCCTTT
GATATCTAAGAGAGCCGTATAG
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