mRNA_S-dermatodea_contig11631.1036.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig11631.1036.1
Unique NamemRNA_S-dermatodea_contig11631.1036.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
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BLAST of mRNA_S-dermatodea_contig11631.1036.1 vs. uniprot
Match: D7FKH4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKH4_ECTSI)

HSP 1 Score: 352 bits (904), Expect = 4.770e-114
Identity = 163/221 (73.76%), Postives = 197/221 (89.14%), Query Frame = 3 
Query:   63 RFIFLGAPGVGKGSFTAIIAPQLGLATVGVGDLVRDEIKQGSEVGKQLKAFSDSGQLAPDQAINHLVKRRLEQHDAAKGFILDGFPRNLTQAAWMESAGIGIDKVINVTLPEWVTVTKMAARRHCPECRRSFNVADVNSDGYKMPKILPDFDGCDRGVRCPGSVDKLERREDDTEDIIRRRLAVHLSETAPLINLYKEKGLLRGFAVRRGIQDKDALIKLM 725
            RF+FLGAPGVGKGSF +I+ PQLGLAT+G GDLVR+E+K+G+ VGK++KAFSD GQLAPD+ +N+LV+RR+EQ DA++GFILDGFPRNL QAAW+ESAGI ID+VIN+TLPEW+TV K++ARR CPECRRSFN+ADVN DGY MP ILPDF+GCDRG RCPGS++ LERREDDTEDIIR RL V+ S TAPLI+ YK KGLLR FAV+RGI+DKD+L+ +M
Sbjct:    3 RFVFLGAPGVGKGSFASILGPQLGLATIGAGDLVREEVKRGTAVGKEIKAFSDKGQLAPDEVVNNLVRRRVEQADASQGFILDGFPRNLAQAAWLESAGIKIDRVINITLPEWITVKKISARRSCPECRRSFNIADVNKDGYVMPMILPDFEGCDRGSRCPGSLENLERREDDTEDIIRDRLLVYRSATAPLIDFYKTKGLLREFAVKRGIKDKDSLVDVM 223
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BLAST of mRNA_S-dermatodea_contig11631.1036.1 vs. uniprot
Match: A0A835Z7J3_9STRA (Adenylate kinase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7J3_9STRA)

HSP 1 Score: 213 bits (542), Expect = 9.780e-61
Identity = 109/222 (49.10%), Postives = 146/222 (65.77%), Query Frame = 3 
Query:   63 RFIFLGAPGVGKGSFTAIIAPQLGLATVGVGDLVRDEIKQGSEVGKQLKAFSDSGQLAPDQAINHLVKRRLEQHDAAKGFILDGFPRNLTQAAWMESAGIGIDKVINVTLPEWVTVTKMAARRHCPECRRSFNVADVNSDGYKMPKILPDFDGCDRGVRCPGSVDKLERREDDTEDIIRRRLAVHLSETAPLINLYKEKGLLRGFAVRRGIQDKDALIKLML 728
            RF+FLGAPGVGKG+F  IIAP+LG+  +GVGDL+R  I   S +G++ +     G L PD+ I  LV+ RL+Q DA  G++LDG+PR ++QAA +++      KVIN+TL   + V KM ARRHC  C+RSFNV  ++   Y MP +LPDFD C  G RCP  +     REDDT+ I+  R+ VH  ETAPLI  Y++   L  F+V RG++D DAL+  ML
Sbjct:    6 RFVFLGAPGVGKGTFADIIAPKLGIPLIGVGDLIRATIGTDSALGREFRRHVQQGHLVPDEFIMELVEERLKQSDAQGGWLLDGYPRTVSQAAHLDTVARP-HKVINITLEHRIAVQKMQARRHCRLCKRSFNVCSIHEGNYDMPAMLPDFDACSHGQRCPREI---HGREDDTDAIVVARMKVHEQETAPLIQHYQKTDRLVTFSVVRGVKDADALMAHML 223
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BLAST of mRNA_S-dermatodea_contig11631.1036.1 vs. uniprot
Match: W4FYD8_9STRA (ADK_lid domain-containing protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FYD8_9STRA)

HSP 1 Score: 208 bits (530), Expect = 7.590e-59
Identity = 107/224 (47.77%), Postives = 152/224 (67.86%), Query Frame = 3 
Query:   63 RFIFLGAPGVGKGSFTAIIAPQLGLATVGVGDLVRDEIKQGSEVGKQLKAFSDSGQLAPDQAINHLVKRRLEQHDAAKGFILDGFPRNLTQAAWMESAGIGIDKVINVTLPEWVTVTKMAARRHCPECRRSFNVADVNSDGYKMPKILPDFDG-CDRGVRCPGSVDKLERREDDTEDIIRRRLAVHLSETAPLINLYKEKGLLRGFAVRRGIQDKDALIKLMLS 731
            R +FLG PGVGKG++ + IAP+L + T+  GDLVR EIK+ S +GKQ+K FS +G+L PD  I  +++ RL++HDA +G+ILDGFPRN +QA   +     +D V+N  LPEWV + K++ RR C  C   +NVA++N   Y MP +LP  DG CD+   C GS  +L +R DD  D++R RL V+ +ET PLI  Y+ KG+L+ F V +G+ D D L++L+LS
Sbjct:   10 RMMFLGPPGVGKGTYASRIAPKLDIPTISTGDLVRAEIKRDSALGKQIKEFSSTGKLVPDDIILTMIRARLQEHDAKRGYILDGFPRNASQAIEFDKIDT-LDLVVNFDLPEWVLLEKISGRRMCASCGTGYNVANINRGEYVMPPLLPKVDGVCDK---C-GSA-QLVQRPDDAVDVVRHRLQVYANETEPLIAYYEAKGVLKNFHVTKGLADLDRLMQLLLS 227
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BLAST of mRNA_S-dermatodea_contig11631.1036.1 vs. uniprot
Match: A0A6G0XA60_9STRA (ADK_lid domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XA60_9STRA)

HSP 1 Score: 207 bits (528), Expect = 1.950e-58
Identity = 106/219 (48.40%), Postives = 148/219 (67.58%), Query Frame = 3 
Query:   63 RFIFLGAPGVGKGSFTAIIAPQLGLATVGVGDLVRDEIKQGSEVGKQLKAFSDSGQLAPDQAINHLVKRRLEQHDAAKGFILDGFPRNLTQAAWMESAGIGIDKVINVTLPEWVTVTKMAARRHCPECRRSFNVADVNSDGYKMPKILPDFDG-CDRGVRCPGSVDKLERREDDTEDIIRRRLAVHLSETAPLINLYKEKGLLRGFAVRRGIQDKDALI 716
            R +FLG PGVGKG++   IAP+L + T+  GDLVR EIK+ S +GKQ+K FS +G+L PD+ I  +V+ RL++ DA +G+ILDGFPRN++QA   +     +D V+N  LPEWV + K++ RR C  C   FNVA++N   Y MP +LP  DG CD+   C G+   L +R DD  D++R RL V+  ETAPLI+ Y+EKG+L+ F V +G+ D D L+
Sbjct:   24 RMMFLGPPGVGKGTYATRIAPKLNIPTISTGDLVRAEIKRDSALGKQIKEFSSTGKLVPDEIILTMVRARLQEQDAQRGYILDGFPRNVSQAIEFDKIDT-LDLVVNFELPEWVLLEKISGRRMCSSCGTGFNVANINQGEYVMPPLLPKVDGVCDK---CGGT--HLIQRPDDAVDVVRHRLKVYDDETAPLISYYEEKGVLKNFHVTKGLADLDRLM 236
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BLAST of mRNA_S-dermatodea_contig11631.1036.1 vs. uniprot
Match: A0A2D4BSY0_PYTIN (ADK_lid domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BSY0_PYTIN)

HSP 1 Score: 204 bits (520), Expect = 3.950e-57
Identity = 104/223 (46.64%), Postives = 145/223 (65.02%), Query Frame = 3 
Query:   63 RFIFLGAPGVGKGSFTAIIAPQLGLATVGVGDLVRDEIKQGSEVGKQLKAFSDSGQLAPDQAINHLVKRRLEQHDAAKGFILDGFPRNLTQAAWMESAGIGIDKVINVTLPEWVTVTKMAARRHCPECRRSFNVADVNSDGYKMPKILPDFDGCDRGVRCPGSVDKLERREDDTEDIIRRRLAVHLSETAPLINLYKEKGLLRGFAVRRGIQDKDALIKLMLS 731
            + +FLGAPG GKG++ + IAP L + T+  GDLVR EIK  +E+G+++K ++D G L PD+ I  +V +RL++ DA  GFILDGFPR LTQA       +  D V+N+ LP+W+ V K++ RR C  C   +NVA +N   Y MP +LP  +G   G  C G    L +R DD ED++R+RL V+  ETAPLI+ Y +KG LR F V+RG+ D D L+ L+ S
Sbjct:   31 KIMFLGAPGAGKGTYASRIAPLLQIPTISTGDLVRHEIKHNTELGRKIKEYNDRGALVPDEIILDMVAQRLKEDDAKAGFILDGFPRTLTQAEEFAKV-VEFDLVVNIDLPQWILVEKISGRRVCKSCGTGYNVAYINHGEYNMPPLLPKVEGVCDG--CGGVT--LVQRPDDNEDVVRKRLEVYNDETAPLIDFYADKGSLRTFEVKRGLADLDKLVHLIQS 248
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BLAST of mRNA_S-dermatodea_contig11631.1036.1 vs. uniprot
Match: A0A024U7C2_9STRA (ADK_lid domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U7C2_9STRA)

HSP 1 Score: 203 bits (517), Expect = 5.370e-57
Identity = 104/222 (46.85%), Postives = 148/222 (66.67%), Query Frame = 3 
Query:   63 RFIFLGAPGVGKGSFTAIIAPQLGLATVGVGDLVRDEIKQGSEVGKQLKAFSDSGQLAPDQAINHLVKRRLEQHDAAKGFILDGFPRNLTQAAWMESAGIGIDKVINVTLPEWVTVTKMAARRHCPECRRSFNVADVNSDGYKMPKILPDFDG-CDRGVRCPGSVDKLERREDDTEDIIRRRLAVHLSETAPLINLYKEKGLLRGFAVRRGIQDKDALIKLM 725
            R +FLG PGVGKG++   IAP+L + T+  GDLVR EIK+ S +G+Q+K FS +G+L PD+ I  +V+ RL++ DA +G+ILDGFPRN +QA   +     +D V+N  LPEWV + K++ RR C  C   FNVA++NS  Y MP +LP  DG CD+   C G+  +L +R DD  D++R RL V+  ET PLI  Y+ KG+L+ F V +G+ D D L+ ++
Sbjct:   10 RMMFLGPPGVGKGTYATRIAPKLNIPTISTGDLVRAEIKRDSALGRQIKEFSATGKLVPDEIILTMVRARLQEPDAKRGYILDGFPRNASQAVEFDKIDT-LDLVVNFDLPEWVLLEKISGRRMCSSCGTGFNVANINSGEYVMPPLLPKVDGVCDK---CGGA--QLVQRPDDAVDVVRHRLQVYADETEPLIAYYEAKGVLQNFHVTKGLADLDRLMHVL 225
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BLAST of mRNA_S-dermatodea_contig11631.1036.1 vs. uniprot
Match: T0RG68_SAPDV (ADK_lid domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0RG68_SAPDV)

HSP 1 Score: 202 bits (513), Expect = 1.660e-56
Identity = 100/214 (46.73%), Postives = 144/214 (67.29%), Query Frame = 3 
Query:   63 RFIFLGAPGVGKGSFTAIIAPQLGLATVGVGDLVRDEIKQGSEVGKQLKAFSDSGQLAPDQAINHLVKRRLEQHDAAKGFILDGFPRNLTQAAWMESAGIGIDKVINVTLPEWVTVTKMAARRHCPECRRSFNVADVNSDGYKMPKILPDFD-GCDRGVRCPGSVDKLERREDDTEDIIRRRLAVHLSETAPLINLYKEKGLLRGFAVRRGIQD 701
            R +FLG PGVGKG++   IAP+L + T+  GDLVR EIK+ S +GKQ+K +S  G+L PD+ I  +V++RL++ DA KG+ILDGFPRN++QA   +     +D V+N  LPEWV + K++ RR C  C   +NVAD+NS  Y MP +LP  +  CD+   C  +  K+ +R DDT D+++ RL V+  ET PLI  Y +KG+L+ F V++G+ D
Sbjct:    6 RMMFLGPPGVGKGTYATRIAPKLSIPTISTGDLVRAEIKRDSALGKQIKDYSSQGKLVPDEIILTMVRQRLQEKDAQKGYILDGFPRNVSQAIEFDKIAT-LDSVVNFELPEWVLIEKLSGRRVCDSCGTGYNVADINSGEYVMPPLLPKAECTCDK---CGSN--KIVQRADDTLDVVKHRLQVYTDETEPLIQYYTDKGILKSFHVKKGLAD 213
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BLAST of mRNA_S-dermatodea_contig11631.1036.1 vs. uniprot
Match: A0A1W0A5T8_9STRA (Adenylate kinase n=2 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1W0A5T8_9STRA)

HSP 1 Score: 201 bits (510), Expect = 4.460e-56
Identity = 101/214 (47.20%), Postives = 145/214 (67.76%), Query Frame = 3 
Query:   63 RFIFLGAPGVGKGSFTAIIAPQLGLATVGVGDLVRDEIKQGSEVGKQLKAFSDSGQLAPDQAINHLVKRRLEQHDAAKGFILDGFPRNLTQAAWMESAGIGIDKVINVTLPEWVTVTKMAARRHCPECRRSFNVADVNSDGYKMPKILPDFDG-CDRGVRCPGSVDKLERREDDTEDIIRRRLAVHLSETAPLINLYKEKGLLRGFAVRRGIQD 701
            R +FLG PGVGKG++   IAP+L + T+  GDLVR EIKQ +E+GK++K +S  G+L PD+ I  +V++RL+Q DA KG+ILDGFPRN++QA   +     +D V N  LP+WV V K++ RR C  C   +N+AD+ +  Y MP +LP  D  CD+   C GS DK+ +R DDT ++++ RL V+  ET PLI  Y +KG+L+ F V++G+ D
Sbjct:    6 RMMFLGPPGVGKGTYATRIAPKLNIPTISTGDLVRAEIKQNTELGKKIKDYSSQGKLVPDEIILTMVRQRLQQTDAQKGYILDGFPRNVSQAIEFDKIAT-LDTVFNFELPDWVLVEKLSGRRVCDSCGTGYNIADIKNGEYVMPPLLPKVDSTCDK---C-GS-DKIIQRADDTLEVVKHRLQVYTDETEPLIKYYADKGILKSFHVKKGLAD 213
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BLAST of mRNA_S-dermatodea_contig11631.1036.1 vs. uniprot
Match: A0A485KF55_9STRA (Aste57867_5851 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KF55_9STRA)

HSP 1 Score: 200 bits (509), Expect = 7.020e-56
Identity = 106/222 (47.75%), Postives = 147/222 (66.22%), Query Frame = 3 
Query:   63 RFIFLGAPGVGKGSFTAIIAPQLGLATVGVGDLVRDEIKQGSEVGKQLKAFSDSGQLAPDQAINHLVKRRLEQHDAAKGFILDGFPRNLTQAAWMESAGIGIDKVINVTLPEWVTVTKMAARRHCPECRRSFNVADVNSDGYKMPKILPDFDG-CDRGVRCPGSVDKLERREDDTEDIIRRRLAVHLSETAPLINLYKEKGLLRGFAVRRGIQDKDALIKLM 725
            R +FLG PGVGKG++   +AP+L + T+  GDLVR EIK+ S +GKQ+K FS SG+L PD+ I  +V+ RL + DA +G+ILDGFPRN++QA   +     +D V+N  LPEWV + K++ RR C  C   FNVAD+N   Y MP +LP  +G CD+   C GS  +L +R DD  D++R RL V+  ETAPLI+ Y +KG+L  F V +G+ D   L K++
Sbjct:   10 RMMFLGPPGVGKGTYATRLAPKLNIPTISTGDLVRAEIKRDSALGKQIKEFSASGKLVPDEIILTMVRNRLNEPDAQRGYILDGFPRNVSQAVEFDKIAT-LDLVVNFDLPEWVLLEKLSGRRMCSGCGTGFNVADINRGEYVMPPLLPKVNGICDK---C-GST-QLIQRADDAVDVVRHRLKVYDDETAPLIDYYDKKGVLTNFHVTKGLADLPRLEKVL 225
[Close]
BLAST of mRNA_S-dermatodea_contig11631.1036.1 vs. uniprot
Match: A0A8K1FH78_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FH78_PYTOL)

HSP 1 Score: 196 bits (498), Expect = 5.940e-54
Identity = 100/222 (45.05%), Postives = 143/222 (64.41%), Query Frame = 3 
Query:   63 RFIFLGAPGVGKGSFTAIIAPQLGLATVGVGDLVRDEIKQGSEVGKQLKAFSDSGQLAPDQAINHLVKRRLEQHDAAKGFILDGFPRNLTQAAWMESAGIGIDKVINVTLPEWVTVTKMAARRHCPECRRSFNVADVNSDGYKMPKILPDFDG-CDRGVRCPGSVDKLERREDDTEDIIRRRLAVHLSETAPLINLYKEKGLLRGFAVRRGIQDKDALIKLM 725
            + +FLGAPG GKG++   IAP L + T+  GDLVR EIK  + +G+Q+KA++D G L PD  I  +V++RL+  DA +GFILDGFPR + QA       + +D V+N+ LP+W+ + K++ RR C  C   +NVA ++   Y MP +LP  DG CD    C  +   L +R DD E+++R+RL V+  ETAPLI+ Y  KG LR F V+RG+ D D L+ L+
Sbjct:   38 KIMFLGAPGAGKGTYATRIAPVLQIPTISTGDLVRYEIKHNTPLGEQIKAYNDRGALVPDSIILDMVEKRLQDDDAKRGFILDGFPRTVNQAEEFAKI-VDLDLVVNIDLPQWILMDKISGRRVCKTCGTGYNVAFIDQGEYNMPPLLPKVDGVCDS---CGNAT--LVQRHDDKEEVVRKRLDVYNDETAPLIDFYAAKGSLRTFEVKRGLADLDKLMDLI 253
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11631.1036.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKH4_ECTSI4.770e-11473.76Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z7J3_9STRA9.780e-6149.10Adenylate kinase-domain-containing protein n=1 Tax... [more]
W4FYD8_9STRA7.590e-5947.77ADK_lid domain-containing protein n=3 Tax=Aphanomy... [more]
A0A6G0XA60_9STRA1.950e-5848.40ADK_lid domain-containing protein n=1 Tax=Aphanomy... [more]
A0A2D4BSY0_PYTIN3.950e-5746.64ADK_lid domain-containing protein n=1 Tax=Pythium ... [more]
A0A024U7C2_9STRA5.370e-5746.85ADK_lid domain-containing protein n=2 Tax=Aphanomy... [more]
T0RG68_SAPDV1.660e-5646.73ADK_lid domain-containing protein n=1 Tax=Saproleg... [more]
A0A1W0A5T8_9STRA4.460e-5647.20Adenylate kinase n=2 Tax=Saprolegniaceae TaxID=476... [more]
A0A485KF55_9STRA7.020e-5647.75Aste57867_5851 protein n=1 Tax=Aphanomyces stellat... [more]
A0A8K1FH78_PYTOL5.940e-5445.05Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig11631contigS-dermatodea_contig11631:805..6426 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score354.0
Seed ortholog evalue5.4e-95
Seed eggNOG ortholog2880.D7FKH4
KEGG rclassRC00002,RC00078
KEGG koko:K00858,ko:K00939,ko:K00944
KEGG ReactionR00104,R00127,R00157,R00333,R01547,R11319
KEGG Pathwayko00230,ko00730,ko00760,ko01100,ko01110,ko01130,map00230,map00730,map00760,map01100,map01110,map01130
KEGG ModuleM00049
EggNOG free text desc.adenylate kinase activity
EggNOG OGsCOG0563@1,KOG3078@2759
EC2.7.1.23,2.7.4.10,2.7.4.3
COG Functional cat.F
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko04147
Hectar predicted targeting categoryother localisation
Exons9
Model size2209
Cds size693
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924211.322194-UTR-S-dermatodea_contig11631:804..8511622924211.322194-UTR-S-dermatodea_contig11631:804..851Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig11631 805..851 +
1694079096.0392067-UTR-S-dermatodea_contig11631:804..8511694079096.0392067-UTR-S-dermatodea_contig11631:804..851Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig11631 805..851 +
1622924211.4276009-UTR-S-dermatodea_contig11631:4957..64261622924211.4276009-UTR-S-dermatodea_contig11631:4957..6426Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig11631 4958..6426 +
1694079096.1555283-UTR-S-dermatodea_contig11631:4957..64261694079096.1555283-UTR-S-dermatodea_contig11631:4957..6426Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig11631 4958..6426 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924211.3305323-CDS-S-dermatodea_contig11631:851..9351622924211.3305323-CDS-S-dermatodea_contig11631:851..935Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11631 852..935 +
1694079096.0542877-CDS-S-dermatodea_contig11631:851..9351694079096.0542877-CDS-S-dermatodea_contig11631:851..935Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11631 852..935 +
1622924211.3407931-CDS-S-dermatodea_contig11631:1178..12561622924211.3407931-CDS-S-dermatodea_contig11631:1178..1256Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11631 1179..1256 +
1694079096.062393-CDS-S-dermatodea_contig11631:1178..12561694079096.062393-CDS-S-dermatodea_contig11631:1178..1256Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11631 1179..1256 +
1622924211.3539753-CDS-S-dermatodea_contig11631:2002..20531622924211.3539753-CDS-S-dermatodea_contig11631:2002..2053Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11631 2003..2053 +
1694079096.0723305-CDS-S-dermatodea_contig11631:2002..20531694079096.0723305-CDS-S-dermatodea_contig11631:2002..2053Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11631 2003..2053 +
1622924211.3627603-CDS-S-dermatodea_contig11631:2721..27691622924211.3627603-CDS-S-dermatodea_contig11631:2721..2769Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11631 2722..2769 +
1694079096.0842495-CDS-S-dermatodea_contig11631:2721..27691694079096.0842495-CDS-S-dermatodea_contig11631:2721..2769Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11631 2722..2769 +
1622924211.374165-CDS-S-dermatodea_contig11631:3435..34801622924211.374165-CDS-S-dermatodea_contig11631:3435..3480Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11631 3436..3480 +
1694079096.0978575-CDS-S-dermatodea_contig11631:3435..34801694079096.0978575-CDS-S-dermatodea_contig11631:3435..3480Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11631 3436..3480 +
1622924211.3840759-CDS-S-dermatodea_contig11631:3623..37501622924211.3840759-CDS-S-dermatodea_contig11631:3623..3750Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11631 3624..3750 +
1694079096.1146452-CDS-S-dermatodea_contig11631:3623..37501694079096.1146452-CDS-S-dermatodea_contig11631:3623..3750Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11631 3624..3750 +
1622924211.3944128-CDS-S-dermatodea_contig11631:4096..42201622924211.3944128-CDS-S-dermatodea_contig11631:4096..4220Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11631 4097..4220 +
1694079096.126783-CDS-S-dermatodea_contig11631:4096..42201694079096.126783-CDS-S-dermatodea_contig11631:4096..4220Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11631 4097..4220 +
1622924211.406586-CDS-S-dermatodea_contig11631:4500..45561622924211.406586-CDS-S-dermatodea_contig11631:4500..4556Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11631 4501..4556 +
1694079096.1372058-CDS-S-dermatodea_contig11631:4500..45561694079096.1372058-CDS-S-dermatodea_contig11631:4500..4556Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11631 4501..4556 +
1622924211.4197278-CDS-S-dermatodea_contig11631:4877..49571622924211.4197278-CDS-S-dermatodea_contig11631:4877..4957Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11631 4878..4957 +
1694079096.1460793-CDS-S-dermatodea_contig11631:4877..49571694079096.1460793-CDS-S-dermatodea_contig11631:4877..4957Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11631 4878..4957 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig11631.1036.1prot_S-dermatodea_contig11631.1036.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig11631 852..4957 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig11631.1036.1

>prot_S-dermatodea_contig11631.1036.1 ID=prot_S-dermatodea_contig11631.1036.1|Name=mRNA_S-dermatodea_contig11631.1036.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=231bp
MRTPTRFIFLGAPGVGKGSFTAIIAPQLGLATVGVGDLVRDEIKQGSEVG
KQLKAFSDSGQLAPDQAINHLVKRRLEQHDAAKGFILDGFPRNLTQAAWM
ESAGIGIDKVINVTLPEWVTVTKMAARRHCPECRRSFNVADVNSDGYKMP
KILPDFDGCDRGVRCPGSVDKLERREDDTEDIIRRRLAVHLSETAPLINL
YKEKGLLRGFAVRRGIQDKDALIKLMLSSE*
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mRNA from alignment at S-dermatodea_contig11631:805..6426+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig11631.1036.1 ID=mRNA_S-dermatodea_contig11631.1036.1|Name=mRNA_S-dermatodea_contig11631.1036.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=5622bp|location=Sequence derived from alignment at S-dermatodea_contig11631:805..6426+ (Saccorhiza dermatodea SderLu1190fm monoicous)
CACAAGCATACGCCAGAGGCGCACTAAGCCTCTCCTGCAATTGCACCATG
CGAACACCGACTCGTTTCATTTTCCTGGGAGCCCCAGGAGTAGGCAAGGG
GTCTTTCACGGCCATAATAGCGCCCCAACTGGTGAGAACAGCAGCAGTTT
CACATAGTTGTACGTACTGGTATATACTACTGCTGTACCAGTATATGATA
GTGGTTTCATGTTTCACAGGTAAATGCCCCGCACGTGTCGGCAGGGGCAG
CGTGCTGAGCGTGCGTCTGCGTGGTGGTGCCTGGCGTCATGCTGGCCTGG
ACGGTACGTTGCGCTCTTCTCCGTGCTTCTGCCTCACTCCCGATTACGTG
TGCCTTCGTGCGCCCTGTATTTAGGGACTGGCTACTGTCGGAGTGGGTGA
CCTGGTCAGGGATGAAATCAAGCAAGGCTCTGAAGTGGGAAAGCAGCTAA
AGGTGAGACGGAGACAGCACGCCGTTGGTTGTGGGACAACTGACAAGCTG
ACAAGTCAATTCGATAATGGCCTTGTTCTTCTTGTTTGTTGGTAGTGCTG
TATAGGTTCTTAATAGGGTTCTCCACTGGAAGAGACCGAAGGGAGTGCTG
TGCTAACCCGTCGCACCCGCCTCCTCTGAAATCGCTGCCTCGCGCCCCCT
GCGTGACCGCAGTGGTTTGGGTGCCACGATGCTTTTGGATTATGGTTTGC
ACGGGCGGCTCATGCGTATCATTTGTCCAAGCGATGCAAGTATCCTAGTT
TCGCGTTTCGGAATGCCAGGTATATTATATGATAGCGCGAATGACCCTGA
CGTGCCAACAAACGCATTGCGAACCTGATTCGTCTCCATCAAACGCTATT
GCGGGTGCACCTTCAAAGCGGCATGACTGATTGCTGGGGTGGTTTCGTAG
GCGGGTTGTGAGCTGTTGAATGACCGCGTCCACATGTATATACTTCAAGT
GATGACCTGTCCTGTCTAATCCTAATAAATACTCTGTGTGTTACGACACC
ATTCGCAAAACTACTTTTGAATCATCCGAAACACTCACATAGTACTGTCA
CTAAAACAACACGATCCCTTCCCGAACATAATAATTTGATAAATGTGCGT
CCTAATACACAGACAGCAGTAGCAGAGTGAGGACCGTTTTCCTCTATCCG
ACTAATGGTTGATTCCTCTCTCTCCCACGTGTATCATACAAATGCCAGGC
GTTCTCCGACAGTGGTCAGCTCGCTCCGGATCAAGCCATCAACCACCTGG
TGAACAATCGCTCGAACGCTTTTTGAAACAAAGCGATTTCTATTTTTTTC
CCCATCTTGGCTTTGACACACCCGGAAACCGCTCCGGGCAGCCTGATGTT
TTAGCGTCTCTCACCCCGTTCATATCTCGATTTTTATCGCGTATTAGGTC
CAGCGCTCCCGCAGCTATGTATACACAAAACCTCGATGTTACTTTTGCAG
GGAACCCCGAGCACGTTTGGCTCGATATGTTGACATGTGGCTCGAACAAG
CCTATCGCTCGACGAAGGCTTAGACTTGTGCTGGGCAAAGTTCGTTTATG
TCCACCTGTCAAGGTTCAGCAAGCACCTGTCTCAGTCGTATTCTGGCCGC
GCCAAGTTTAAGCACCTGCTGGAGGCTGTCGACTTTCGTGCGCCCGCTCT
CAGATGCAAGTTTCGTCATTTTGTTTACGTAATGCGAGTGAAAACGCCCC
CGGGTGTCTTAAGTACGGTACGCTTACAAGTATGATGTTACTGTAGAGGT
TGACGTGTCAGCTTCCGACGCCGATTTCATTGATTTTCAACGTTTGTGGA
GGGTACCACATACCATATACCATGGTATTTTATATCTCGTCGCGCGTGGC
TTCGGGACCGAATTCCCGACGTGTCGGTGCTTCATCTGGCACGCTGCTTT
CACGTTGGTCTCTGCAGGTGAAACGGCGCCTGGAGCAACACGACGCTGCT
AAGGGATTCATTCTGGTGAGCGCATTAAATTTTTGGGACTGCTACAAGTA
TCGTGACAAACTCCTTTAAGGGTATTTGCACGCACGTACCCTCCGCTGTG
ACATGCGTACGTGACGCGGGAGATCACCTGCCTCGGCTGCTACCAAACAC
TTGCGCTCTCGTCTGCGTGCGCTCCGGGATACCTAGCACGATTCGACATT
CGCCTGAGTAGCATCCGGGCTTCCCTGGCGCTGAACGGAATGCCGAAGTG
AACATGGACCTGGTGTTGTGCCAGTCACGGGTGTTGCAATTCTGTTTTAC
TTGCGCGCTTTCGAGCAGCAGCTTGAATTTGCGACACAACGTGGCAAACC
GGCTTCGATAACCTTATTTGCCAATCGCTGTTCGCTTTGACGCGGGTGCG
GAACGAGGTTATCTGGTTCACTTTACTGGGCGTGTTTTAACGCCTCGTCT
CCTTGTAATCCGAGTGTTCGGCGAGCCCCGGGTGTGCTGAAACCATTGCG
CGATAAGCAATGTAAGATAAATGCCGCACTGAGAGAGATTGGATGGTCCC
TCGTGGTCACAGACGGGATTTGGACCAGGCCAGTCCGTCTTACGTGAACC
ACGCACACACACATTGGCGTCCGGAGCATGACGTACATCTACCCTTGCCC
CCTACCACGTTTCTGCATCGCGATTGTACAGGATGGCTTCCCCCGAAACT
TGACCCAGGCGGCGTGGATGGAATCGGTACGTGAAGGTGTCGGGGAACCG
GGAATGTCGCCGCTGCTTCAGGCGAATATATACCGAACAGGGCGCAACGA
CTTTTGTTTTTTCTGAATTTATGTCCTTGTCCCCATGCAATGTCTGCGGC
GGCCGCTCTACGCCAACAGGCAGGCATAGGCATAGATAAGGTGATCAACG
TGACGCTTCCCGAGTGGGTTACTGTAACGAAGATGGCAGCTAGGCGTCAC
TGCCCGGAGTGCCGCAGAAGTTTCAATGTTGCTGACGTCAATTCAGGTGC
GTCGACGACAAACTACTGTACCTTTGTTTTTGGGCTGTGCTGCCCCGCTC
TCGGGGTGTCAGAAAAGGGAGCCCGTTAAACTTCTTGTGCGTTGTAACCA
CAACATGCTTTACACGGAGTCTTCACCCGATAGGTCAGCGAGTGCAAAAG
CAGGGCAGGACATCCATCTTGTAGTGATGCGCTGATGCTCGCCCTGCTCA
TAGTGCTCGGCACGATTTGCTTCCCGGCTGGTTGAGGTGCAGCCGAGATA
ACTAAAATCCAATGCAAATTTGACAAGGCTTGAGAGTTTCGCCTTGATAC
GGCTTGCCCGCTTCTCGTCCACCCATGTCTGGCCTCAAACAGACGGCTAC
AAGATGCCCAAGATTTTGCCAGATTTCGATGGGTGCGACAGAGGAGTGCG
ATGTCCTGGATCGGTCGATAAGCTTGAGAGGCGCGAAGACGACACGGAAG
ACATCATACGTCGCAGGTATTGCGCAAACTCTCGAAAGGCGTGCTTGAAC
GGGTTCGTACGTGTAGGCGACCACATATTCTACGTGTGTACACTCCGAAC
GACACAGTAAGCCTACTTGCTCCTCTCCTGCCAGAGCAGCACATGCTGGG
TGTCATACGCACATAAAAGTGCAGCGGAAATTCTCGTATGGGCAGTCAAG
TACGGCTACCCTTCTATGGCTCGCCGTGCTGTGTGCTGTGTGCTGCCCTT
TTATGGCTCGCTCACCACTGCTCCGCTTCGTCGTGCCCGTGCACAGGCTC
GCCGTGCATCTCTCCGAGACCGCCCCGCTCATTAACTTGTACAAGGAGAA
GGGTAAGTCTATTGATGTTCTCCGTACGTGCACGAAACAACTTCGCCTTT
CCACTCCATGCTGTGTGTGTTATAGTGAGCTTGGCCGGAGTTATGCTGAA
TTCTTCATAATATGCTACTGTAGTACTGTAACGTTAAAAACAGCGCATGC
ATATTTCGCTTTGTTTACGAATGACCATGATACCCGAATCTCACTTGTTA
GCTTATCCCCGGCGCTCTTAGTCATGGTCACAGTTAGCTTTTAGGCAGAC
ACGCCATAGCGCCGCCAGTCTCACGACGTCGGTGTCAACACTACGGGTTG
CATTCCTCTGATGCTCTGCCCAGGGCTGCTTCGAGGCTTCGCAGTGCGAC
GAGGAATACAGGACAAAGACGCCCTGATAAAGTTGATGCTGTCAAGCGAA
TGATTCAAGGGCGGAAGTGCTGGGTTTGACACTATCGGTAGGAATAGACA
CGCAGCTCCGGTATTTGTAGGTGGTTTAGGTGTACCCCCCTTACAAATTG
TTTTGCCTCCGTAGCGAAGCGAAGCGCAGCAGTCGGATATTCGTCCCCGA
GAGAGGAGACACGGGAAGGTACTATATATTTAATATGTTTTGTGTAACAG
GGTATCGCGGGTGGTGGCGGAAGAGGTATTTGTTTATCATTTTTTAAAGA
CATCATTTACAACCGGCTCAGACGAGGGTCAAGCGTCTTGGAATATGGTG
TGGTCGCTGCGGCACAGGAGGGAAGGTCAACTGCCAGACGGTGGTATAGC
ACCGTTTTTAAGGTTGTCGGTAACATTGTGTAAAGGCGGTGGCTCGTGCG
GCCTGAAAATGAACCATGGCATGCTTGTGAATGAAGCTGGCGTTCGCGGT
TGAGAGGGCTGAACTGGTTGGCGCCATTCTGAATCAAGAGCGGTCGGTCG
GTAGTGCCACTGGGTAGTTGTGGATGGTTCGTGATACACGAGCACTCCTA
AAATACTGTATTGGCTGGCTTAGGTGCATGCCAGTACTGCCGAGTTCCCG
CCACATAAAGTACAAACCTTGGGTGTTCATTTTGCTTTTTAGGATTTCCC
TTTTGGCACTACTTGGAGTCCCCACAGAAACAGGCCCCTCAGCTCCCGTT
TTCAGACCGAAACGATTTTAGTTATTTTCTAAATCGTGTGTGCGCCACAC
CACACACGGGTCCTTCAAACCCCGGAACGCATCGATTCACGCCTCATGAA
CTCCCTCCGTGGGAGCGGGGTGGCGGCAGCGGTGGCGGCGGCCCTACGCT
CATCATACAGCATAATATTTACCCGCTGTGGCCTGTTGGTAAGTCTTCCA
GAGCAGATCCCTACAAGTATTCAGTCGTGTCGCATGGTTGAGAGGGGGAT
GGGGCAATTGGGGATCCATACTAAAATCGCAGTAACAAAATGTCCGAACA
GCTATTATTTATTAAAGATTTGCGACATGAATTCTTTCAGACAAGCACAG
ACAATTTGTCATTCCCCTCCGTGGGGCAAAGGTACGGGTTCTAGTCCGGT
ACTAGGCCTGTTTTTGGGTAATTTCCAGAGGTTTGTTTTGACGACCTGAT
CGTCAGTAACTGTTGCGGCGTTTTCGTGGGCCGGCCTCGAGGCTGGCCGA
AGACAAGCGCGGGTTAGGACTGGAAACCACCCAGGCACACACCGTCGCAA
AATAAGAGGCCGCGGCAGTCCCGACGACACGGGAGAGGGTGTACCATAGA
AGCTGCACGACAGAGTACAGGATGTGGAGGACACCGGTCTCAAAAGGGTT
TAAGATGACGGGGGGGAAATCAACATGACTGCAACTGTCCGAAACCAAAC
TACCTCCCCCACCCCCCCAATGCACTACCTCCCACCAACACAAATTTACC
AGTCTTTTGTATGTATAGCCAA
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Coding sequence (CDS) from alignment at S-dermatodea_contig11631:805..6426+

>mRNA_S-dermatodea_contig11631.1036.1 ID=mRNA_S-dermatodea_contig11631.1036.1|Name=mRNA_S-dermatodea_contig11631.1036.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1386bp|location=Sequence derived from alignment at S-dermatodea_contig11631:805..6426+ (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGCGAACACCGACTCGTTTCATTTTCCTGGGAGCCCCAGGAGTAGGCAA
GGGGTCTTTCACGGCCATAATAGCGCCCCAACTGATGCGAACACCGACTC
GTTTCATTTTCCTGGGAGCCCCAGGAGTAGGCAAGGGGTCTTTCACGGCC
ATAATAGCGCCCCAACTGGGACTGGCTACTGTCGGAGTGGGTGACCTGGT
CAGGGATGAAATCAAGCAAGGCTCTGAAGTGGGAAAGCAGCTAAAGGGAC
TGGCTACTGTCGGAGTGGGTGACCTGGTCAGGGATGAAATCAAGCAAGGC
TCTGAAGTGGGAAAGCAGCTAAAGGCGTTCTCCGACAGTGGTCAGCTCGC
TCCGGATCAAGCCATCAACCACCTGGCGTTCTCCGACAGTGGTCAGCTCG
CTCCGGATCAAGCCATCAACCACCTGGTGAAACGGCGCCTGGAGCAACAC
GACGCTGCTAAGGGATTCATTCTGGTGAAACGGCGCCTGGAGCAACACGA
CGCTGCTAAGGGATTCATTCTGGATGGCTTCCCCCGAAACTTGACCCAGG
CGGCGTGGATGGAATCGGATGGCTTCCCCCGAAACTTGACCCAGGCGGCG
TGGATGGAATCGGCAGGCATAGGCATAGATAAGGTGATCAACGTGACGCT
TCCCGAGTGGGTTACTGTAACGAAGATGGCAGCTAGGCGTCACTGCCCGG
AGTGCCGCAGAAGTTTCAATGTTGCTGACGTCAATTCAGGCAGGCATAGG
CATAGATAAGGTGATCAACGTGACGCTTCCCGAGTGGGTTACTGTAACGA
AGATGGCAGCTAGGCGTCACTGCCCGGAGTGCCGCAGAAGTTTCAATGTT
GCTGACGTCAATTCAGACGGCTACAAGATGCCCAAGATTTTGCCAGATTT
CGATGGGTGCGACAGAGGAGTGCGATGTCCTGGATCGGTCGATAAGCTTG
AGAGGCGCGAAGACGACACGGAAGACATCATACGTCGCAGACGGCTACAA
GATGCCCAAGATTTTGCCAGATTTCGATGGGTGCGACAGAGGAGTGCGAT
GTCCTGGATCGGTCGATAAGCTTGAGAGGCGCGAAGACGACACGGAAGAC
ATCATACGTCGCAGGCTCGCCGTGCATCTCTCCGAGACCGCCCCGCTCAT
TAACTTGTACAAGGAGAAGGGCTCGCCGTGCATCTCTCCGAGACCGCCCC
GCTCATTAACTTGTACAAGGAGAAGGGGCTGCTTCGAGGCTTCGCAGTGC
GACGAGGAATACAGGACAAAGACGCCCTGATAAAGTTGATGCTGTCAAGC
GAATGAGGCTGCTTCGAGGCTTCGCAGTGCGACGAGGAATACAGGACAAA
GACGCCCTGATAAAGTTGATGCTGTCAAGCGAATGA
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