prot_S-dermatodea_contig11614.1029.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig11614.1029.1
Unique Nameprot_S-dermatodea_contig11614.1029.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length82
Homology
BLAST of mRNA_S-dermatodea_contig11614.1029.1 vs. uniprot
Match: D8LF39_ECTSI (Putative Translation Initiation Inhibitor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF39_ECTSI)

HSP 1 Score: 122 bits (307), Expect = 1.810e-33
Identity = 63/79 (79.75%), Postives = 67/79 (84.81%), Query Frame = 0
Query:    1 MIIDNQGAVGDLDKLRLVKITGFVNSADDFTSQSQVLNGASDLFLEVFGAEKGAHARSAVGVNSLPLGVCVEIEAIVEV 79
            +I   + A GDLDK+RLVKITGFV SAD FT QS VLNGASDL LEVFG EKGAHARSAVGVN+LPLGVCVEIEAI EV
Sbjct:  120 LITTMKAAAGDLDKIRLVKITGFVRSADGFTGQSAVLNGASDLLLEVFGREKGAHARSAVGVNALPLGVCVEIEAIAEV 198          
BLAST of mRNA_S-dermatodea_contig11614.1029.1 vs. uniprot
Match: A0A7S3M7I1_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M7I1_9STRA)

HSP 1 Score: 103 bits (257), Expect = 4.550e-26
Identity = 54/75 (72.00%), Postives = 62/75 (82.67%), Query Frame = 0
Query:    6 QGAVGDLDKLR-LVKITGFVNSADDFTSQSQVLNGASDLFLEVFGAEKGAHARSAVGVNSLPLGVCVEIEAIVEV 79
            + AVGDLDK++ +VKITGFVNSA DFT+Q  VLNG SDL  E+FG E G HARSA+GVN LPLGV VEIEAI+EV
Sbjct:  111 KSAVGDLDKVKKIVKITGFVNSASDFTNQPAVLNGCSDLLGEIFGVEIGRHARSALGVNVLPLGVAVEIEAIIEV 185          
BLAST of mRNA_S-dermatodea_contig11614.1029.1 vs. uniprot
Match: A0A812XST0_SYMMI (TCP17 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812XST0_SYMMI)

HSP 1 Score: 100 bits (249), Expect = 1.580e-25
Identity = 52/80 (65.00%), Postives = 61/80 (76.25%), Query Frame = 0
Query:    1 MIIDNQGAVGDLDKL-RLVKITGFVNSADDFTSQSQVLNGASDLFLEVFGAEKGAHARSAVGVNSLPLGVCVEIEAIVEV 79
            +I   + AVGDLDK+ R+VK+ GFV    DFT Q  V+NG SDL +EVFG EKG HARSAVG N+LPLGV VEIEAI+EV
Sbjct:   49 LITTMKSAVGDLDKVKRIVKLVGFVQCEGDFTQQPAVVNGCSDLMVEVFGMEKGRHARSAVGTNALPLGVAVEIEAIIEV 128          
BLAST of mRNA_S-dermatodea_contig11614.1029.1 vs. uniprot
Match: A0A7S3U393_9SPIT (Hypothetical protein n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3U393_9SPIT)

HSP 1 Score: 98.6 bits (244), Expect = 9.570e-25
Identity = 50/77 (64.94%), Postives = 60/77 (77.92%), Query Frame = 0
Query:    6 QGAVGDLDKL-RLVKITGFVNSADDFTSQSQVLNGASDLFLEVFGAEKGAHARSAVGVNSLPLGVCVEIEAIVEVGP 81
            +G VGDLD++ R+VKI GFVN ADDFT Q +V+NG S+L  ++FG E+GAHARSAVG NSLP  V VEIE I EV P
Sbjct:   51 KGHVGDLDRIVRIVKIVGFVNCADDFTQQPEVINGCSNLLGDIFGQERGAHARSAVGTNSLPRNVPVEIEMIAEVAP 127          
BLAST of mRNA_S-dermatodea_contig11614.1029.1 vs. uniprot
Match: A0A254UMR1_9RHOB (YjgF_endoribonc domain-containing protein n=9 Tax=Thioclava TaxID=285107 RepID=A0A254UMR1_9RHOB)

HSP 1 Score: 98.6 bits (244), Expect = 1.650e-24
Identity = 51/79 (64.56%), Postives = 60/79 (75.95%), Query Frame = 0
Query:    1 MIIDNQGAVGDLDKLRLVKITGFVNSADDFTSQSQVLNGASDLFLEVFGAEKGAHARSAVGVNSLPLGVCVEIEAIVEV 79
            +I   + A+GDLDKLR+VK+ GFVNS  DFT Q +V+NG SDL +EVFG E G HARSAV   SLP+GV VEIEAI EV
Sbjct:   73 LIAQAKAAIGDLDKLRVVKLVGFVNSTTDFTDQPKVINGCSDLMVEVFG-EAGRHARSAVSAASLPMGVAVEIEAIFEV 150          
BLAST of mRNA_S-dermatodea_contig11614.1029.1 vs. uniprot
Match: UPI001A8EDD9E (RidA family protein n=2 Tax=Roseibium limicola TaxID=2816037 RepID=UPI001A8EDD9E)

HSP 1 Score: 97.1 bits (240), Expect = 8.400e-24
Identity = 50/79 (63.29%), Postives = 59/79 (74.68%), Query Frame = 0
Query:    1 MIIDNQGAVGDLDKLRLVKITGFVNSADDFTSQSQVLNGASDLFLEVFGAEKGAHARSAVGVNSLPLGVCVEIEAIVEV 79
            ++   + AVGDL K+RL+K+ GFVNS DDFT Q QV+NGASD  +EV G +KG HARSAV   SLP GV VEIEAI EV
Sbjct:   80 LLAQAKAAVGDLAKVRLIKLVGFVNSTDDFTQQPQVINGASDFMVEVLG-DKGRHARSAVSAASLPFGVAVEIEAIFEV 157          
BLAST of mRNA_S-dermatodea_contig11614.1029.1 vs. uniprot
Match: A0A1H1N076_9MICO (Enamine deaminase RidA, house cleaning of reactive enamine intermediates, YjgF/YER057c/UK114 family n=12 Tax=Brevibacterium TaxID=1696 RepID=A0A1H1N076_9MICO)

HSP 1 Score: 96.7 bits (239), Expect = 1.100e-23
Identity = 49/74 (66.22%), Postives = 61/74 (82.43%), Query Frame = 0
Query:    7 GAVGDLDKL-RLVKITGFVNSADDFTSQSQVLNGASDLFLEVFGAEKGAHARSAVGVNSLPLGVCVEIEAIVEV 79
            G +GDLDK+ R+VK+TGFVNSADDFT Q  V+NG S+L+ E+FG ++G H RSAVGVN+LPLG  VE+E IVEV
Sbjct:   80 GVLGDLDKVVRVVKVTGFVNSADDFTQQPAVINGVSELYGEIFG-DRGQHTRSAVGVNTLPLGTPVEVEVIVEV 152          
BLAST of mRNA_S-dermatodea_contig11614.1029.1 vs. uniprot
Match: A0A162YG94_9MICO (LysR family transcriptional regulator n=8 Tax=Bacteria TaxID=2 RepID=A0A162YG94_9MICO)

HSP 1 Score: 96.3 bits (238), Expect = 1.560e-23
Identity = 48/72 (66.67%), Postives = 60/72 (83.33%), Query Frame = 0
Query:    9 VGDLDKL-RLVKITGFVNSADDFTSQSQVLNGASDLFLEVFGAEKGAHARSAVGVNSLPLGVCVEIEAIVEV 79
            +GDLDK+ R+VK+TGFVNS DDFT Q  V+NG S+L+ E+FG +KG HARSAVGVN+LPLG  VE+E +VEV
Sbjct:   82 IGDLDKVVRVVKVTGFVNSTDDFTQQPSVINGVSELYGEIFG-DKGQHARSAVGVNTLPLGTPVEVEVVVEV 152          
BLAST of mRNA_S-dermatodea_contig11614.1029.1 vs. uniprot
Match: A0A536EQF5_9CHLR (RidA family protein n=2 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A536EQF5_9CHLR)

HSP 1 Score: 95.9 bits (237), Expect = 1.990e-23
Identity = 46/75 (61.33%), Postives = 63/75 (84.00%), Query Frame = 0
Query:    6 QGAVGDLDKLR-LVKITGFVNSADDFTSQSQVLNGASDLFLEVFGAEKGAHARSAVGVNSLPLGVCVEIEAIVEV 79
            + A+G LD++R +VK+TGFV+SA+ FT QS V+NGASDL ++VFGAE+G HAR+AVGV  LPLG  VE+EA++E+
Sbjct:   77 RAALGSLDRVRGVVKLTGFVSSAESFTDQSAVVNGASDLVVDVFGAERGTHARAAVGVAQLPLGAAVELEAVLEI 151          
BLAST of mRNA_S-dermatodea_contig11614.1029.1 vs. uniprot
Match: A0A835Z1E3_9STRA (Putative translation initiation inhibitor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1E3_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 2.460e-23
Identity = 48/71 (67.61%), Postives = 60/71 (84.51%), Query Frame = 0
Query:    9 VGDLDKL-RLVKITGFVNSADDFTSQSQVLNGASDLFLEVFGAEKGAHARSAVGVNSLPLGVCVEIEAIVE 78
            +GDLD++ R+VK+ GFVN  DDFT Q  V+NGASDLF+EVFG +KG HARSAVG N+LPLG+ VEIEA++E
Sbjct:  101 LGDLDRVTRIVKLVGFVNCTDDFTGQPGVINGASDLFVEVFG-KKGVHARSAVGTNALPLGIPVEIEAVIE 170          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11614.1029.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LF39_ECTSI1.810e-3379.75Putative Translation Initiation Inhibitor n=1 Tax=... [more]
A0A7S3M7I1_9STRA4.550e-2672.00Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A812XST0_SYMMI1.580e-2565.00TCP17 protein n=1 Tax=Symbiodinium microadriaticum... [more]
A0A7S3U393_9SPIT9.570e-2564.94Hypothetical protein n=1 Tax=Strombidinopsis acumi... [more]
A0A254UMR1_9RHOB1.650e-2464.56YjgF_endoribonc domain-containing protein n=9 Tax=... [more]
UPI001A8EDD9E8.400e-2463.29RidA family protein n=2 Tax=Roseibium limicola Tax... [more]
A0A1H1N076_9MICO1.100e-2366.22Enamine deaminase RidA, house cleaning of reactive... [more]
A0A162YG94_9MICO1.560e-2366.67LysR family transcriptional regulator n=8 Tax=Bact... [more]
A0A536EQF5_9CHLR1.990e-2361.33RidA family protein n=2 Tax=Chloroflexi bacterium ... [more]
A0A835Z1E3_9STRA2.460e-2367.61Putative translation initiation inhibitor n=1 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006175YjgF/YER057c/UK114 familyPFAMPF01042Ribonuc_L-PSPcoord: 13..79
e-value: 3.9E-13
score: 49.5
IPR035959RutC-like superfamilyGENE3D3.30.1330.40coord: 4..79
e-value: 2.2E-31
score: 110.3
IPR035959RutC-like superfamilySUPERFAMILY55298YjgF-likecoord: 7..79
NoneNo IPR availablePANTHERPTHR43760FAMILY NOT NAMEDcoord: 7..79

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig11614contigS-dermatodea_contig11614:7166..7411 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig11614.1029.1mRNA_S-dermatodea_contig11614.1029.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig11614 7166..7414 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig11614.1029.1 ID=prot_S-dermatodea_contig11614.1029.1|Name=mRNA_S-dermatodea_contig11614.1029.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=82bp
MIIDNQGAVGDLDKLRLVKITGFVNSADDFTSQSQVLNGASDLFLEVFGA
EKGAHARSAVGVNSLPLGVCVEIEAIVEVGP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006175YjgF/YER057c/UK114
IPR035959RutC-like_sf