prot_S-dermatodea_contig11609.1025.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig11609.1025.1
Unique Nameprot_S-dermatodea_contig11609.1025.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length202
Homology
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BLAST of mRNA_S-dermatodea_contig11609.1025.1 vs. uniprot
Match: D8LN52_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN52_ECTSI)

HSP 1 Score: 295 bits (754), Expect = 8.440e-96
Identity = 134/202 (66.34%), Postives = 153/202 (75.74%), Query Frame = 0 
Query:    1 MLLVYAEGASFWPFSMASRGDHSLPYSADSMWVVPQDWFRIAVPGFGSSDNDSPLSYAYWAIVPPLLWTLVTTVWVGLLAIARIFCWYFGHVEDWSAHAWGVYFSSPESPFHKGSRHVQGALGLGFTIWVCKELKRLIVFSAVLAMLVYLGFENGACFEMEWAFIFAHATWWGVMLIAHLARRKNIFKAIPPTSS-AVADRW 201
            MLLVY+EGASFWPFSMASRGDHSLP S DS+W  P DWFR+AVP    SDNDSPLSY YWAIVP LLWTLV+ VWVGLL  A + CWYFGH EDWSAH+WGVYFSS ESPF   S  +Q ALG+GFT W  +E +RL+ FSA LA +V  G+  GAC E EWAF+FA A WW  +LI H AR+KN+FK +   +  AVADRW
Sbjct:  249 MLLVYSEGASFWPFSMASRGDHSLPPSEDSLWANPWDWFRVAVPSLSRSDNDSPLSYVYWAIVPHLLWTLVSAVWVGLLGAANLVCWYFGHAEDWSAHSWGVYFSSQESPFSVWSARLQSALGMGFTAWAAREFRRLLAFSAALAAVVVQGYRRGACLEQEWAFVFAVAAWWIAVLIGHAARKKNMFKPLNEAAGPAVADRW 450
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BLAST of mRNA_S-dermatodea_contig11609.1025.1 vs. uniprot
Match: A0A6H5JN14_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN14_9PHAE)

HSP 1 Score: 160 bits (404), Expect = 1.680e-44
Identity = 69/93 (74.19%), Postives = 76/93 (81.72%), Query Frame = 0 
Query:    1 MLLVYAEGASFWPFSMASRGDHSLPYSADSMWVVPQDWFRIAVPGFGSSDNDSPLSYAYWAIVPPLLWTLVTTVWVGLLAIARIFCWYFGHVE 93
            MLLVY+EGASFWPFSMASRGDHSLP S +S+W  P DWFR+AVP    SDNDSP+SY YWAIVP LLWTLV+ VWVGLL  A + CWYFGH E
Sbjct:  249 MLLVYSEGASFWPFSMASRGDHSLPPSGESLWANPWDWFRVAVPSLSRSDNDSPMSYVYWAIVPHLLWTLVSAVWVGLLGAANLVCWYFGHAE 341
[Close]
BLAST of mRNA_S-dermatodea_contig11609.1025.1 vs. uniprot
Match: A0A6H5JNH5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNH5_9PHAE)

HSP 1 Score: 143 bits (361), Expect = 9.690e-41
Identity = 67/110 (60.91%), Postives = 80/110 (72.73%), Query Frame = 0 
Query:   93 EDWSAHAWGVYFSSPESPFHKGSRHVQGALGLGFTIWVCKELKRLIVFSAVLAMLVYLGFENGACFEMEWAFIFAHATWWGVMLIAHLARRKNIFKAI-PPTSSAVADRW 201
            EDWSAH+WGVYFSS ESPF   S  +Q ALG+GFT W  +E +RL+ FSA LA +V  G+  GAC E EWAF+FA A WW V+LI H AR+KNIFK +    S+AVADRW
Sbjct:   10 EDWSAHSWGVYFSSQESPFSVWSWRLQSALGMGFTAWAAREFRRLLAFSAALAAVVVQGYRRGACLEQEWAFVFAVAAWWIVVLIGHAARKKNIFKPLNDAASAAVADRW 119
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11609.1025.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LN52_ECTSI8.440e-9666.34Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
A0A6H5JN14_9PHAE1.680e-4474.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JNH5_9PHAE9.690e-4160.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 157..161
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 162..181
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..56
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 82..136
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 137..156
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 57..81
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 182..201
NoneNo IPR availableTMHMMTMhelixcoord: 57..79
NoneNo IPR availableTMHMMTMhelixcoord: 162..181
NoneNo IPR availableTMHMMTMhelixcoord: 137..152

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig11609contigS-dermatodea_contig11609:406..1011 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig11609.1025.1mRNA_S-dermatodea_contig11609.1025.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig11609 277..2046 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig11609.1025.1 ID=prot_S-dermatodea_contig11609.1025.1|Name=mRNA_S-dermatodea_contig11609.1025.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=202bp
MLLVYAEGASFWPFSMASRGDHSLPYSADSMWVVPQDWFRIAVPGFGSSD
NDSPLSYAYWAIVPPLLWTLVTTVWVGLLAIARIFCWYFGHVEDWSAHAW
GVYFSSPESPFHKGSRHVQGALGLGFTIWVCKELKRLIVFSAVLAMLVYL
GFENGACFEMEWAFIFAHATWWGVMLIAHLARRKNIFKAIPPTSSAVADR
W*
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