mRNA_S-dermatodea_contig116.1016.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig116.1016.1 vs. uniprot
Match: D8LF30_ECTSI (C3HC-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LF30_ECTSI) HSP 1 Score: 363 bits (931), Expect = 6.050e-109 Identity = 216/452 (47.79%), Postives = 271/452 (59.96%), Query Frame = 1
Query: 1 KPSCRPWDYADFTSRLGTFTPFNWFAKPPSASPLMCARYGWVNTGRDALACKCCSTELQYSEEQ-GTD--------------------------SFLSLLKSRHHPLCPWNGNACPVEFLQLPPMAAEDWCSEFLARLETLTALATATALPAVSLPSDFEEQCPGGLSTLLTKSRP-LLANGSRCSDDTTAAAPAAGRPDFVGATAGEGSDPAVNRAGDKIRDSNSGGTGGDPLAGVGDEVLGTAAAIAMFGWRSV-------STAASSP--------SKQAXXXXXXXVGEKPSPRLYCAVCNRRVATDNFLAVETG-SKAIYSGGADSNAEDA---VASPQGGGDEMRSGKRRRLSGGGTPLKAMDLAAEHRSFCPWAVVHPVVEGESAMEGAAPGWQQSLKALLSRAEPHQQTESPPVDVDGEGFKEEASGKAEEALQKVQKVLGVLMR 1215
KP+CRPWDY F +RL TFTP NWF+KP ASP +CARYGW+NTGRD L+C+CCS +L+++++ G+D SF S L+S+HH LCPWNGNACP EFLQLPPMA ED ++FLARL++L + A ALP VSLPS FE+ CPGGLS L K+ P ++ S++ TA A R + +G+ + A NR + GDE+LGTAAAIAMFGW+S + AA SP S A K RL CA+C RR+ TDNFL +E G S + A + AE++ ++SP+G G RSGKRRRLSGGGTPLK MDLA EHRSFCPWA VHP V GE A+EGA PGW+ L+A+L P +Q + + GF + A+G+ E ALQKVQKVLGVLMR
Sbjct: 57 KPTCRPWDYESFKARLATFTPLNWFSKPAFASPAVCARYGWINTGRDTLSCQCCSAQLRFADQAAGSDGNAANDDVCGXXXXXIVAVVEPTPSSSFSSRLQSQHHDLCPWNGNACPREFLQLPPMAVEDQLADFLARLDSLLPVMRAAALPEVSLPSTFEQHCPGGLSALAAKAMPSVVETREETSENRTAGAHKRQR-----SGSGKAAGSADNRE----------------MLRFGDEMLGTAAAIAMFGWQSAPATVPVSACAAVSPTEGSSSNGSTVAVADGGARATAKSPARLSCALCKRRLVTDNFLTLEAGPSSGVGCTAAGTGAEESPGVLSSPEGRGGSGRSGKRRRLSGGGTPLKPMDLAVEHRSFCPWAAVHPPVAGEEAIEGAVPGWRLPLEAVLGWQNPSKQEQVLSTQKERGGFSDAANGEVEGALQKVQKVLGVLMR 487
BLAST of mRNA_S-dermatodea_contig116.1016.1 vs. uniprot
Match: A0A836CG06_9STRA (C3HC zinc finger-like-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG06_9STRA) HSP 1 Score: 114 bits (285), Expect = 1.250e-22 Identity = 109/392 (27.81%), Postives = 138/392 (35.20%), Query Frame = 1
Query: 7 SCRPWDYADFTSRLGTFTPFNWFAKPPSASPLMCARYGWVNTGRDALACKCC----------STELQYSEEQGTDSFLSL---------------LKSRHHPLCPWNGNACPVEFLQLPPMAAEDWCSEFLARLETLTA--LATATALPAVSLPSDFEEQCPG-GLSTLLTKSRPLLANGSRCSDDTTAAAPAAGRPDFVGATAGEGSDPAVNRAGDKIRDSNSGGTGGDPLAGVGDEVLGTAAAIAMFGWRSVSTAASSPSKQAXXXXXXXVGEKPSPRLYCAVCNRRVATDNFLAVETGSKAIYSGGADSNAEDAVASPQGGGDEMRSGKRRRLSGG-GTPLKAMDLAAEHRSFCPWAVVHPV-VEGESAMEGAAPGWQQSLKALLSRAE 1092
S RPWD+A +T RL TFT WFAKP + SP CAR+GW NTG D L C C E + + + +D+ + L SRH CPW+ + CP FL P + ARL TL LP V LP D E P T L L+ N S E G A A+A+FGW S A++ RL CA C R + T NF + KRRRLSG +PL +D EH ++CPW P E +APGW+Q+L+AL+ AE
Sbjct: 118 SFRPWDFAAYTQRLRTFTTLTWFAKPLAISPAHCARHGWTNTGPDTLTCVSCRATAAFGAPSDVEDEAAAQDASDACTNAAAEAPSVPSTDASDALTSRHRDFCPWHASPCPQSFLSYPLTPGGALLRDARARLRTLLPPLXXXXXXLPRVDLPHDALEAAPALAALTELAVEANLVRNSSXXXXXX------------------------XXXXXXXXXXXXXXXXXXXXXXXXXGEGWGAAVALALFGWERGSEEATT--------------RADGVRLRCACCGRTIGTWNFAPQHPAAAXXXXXXX---------------XXXXXXKRRRLSGETASPLNPLD---EHHAYCPWVAEPPCGTAQEGGRAASAPGWRQTLEALVEAAE 453
BLAST of mRNA_S-dermatodea_contig116.1016.1 vs. uniprot
Match: A0A329RZ20_9STRA (Uncharacterized protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329RZ20_9STRA) HSP 1 Score: 93.2 bits (230), Expect = 3.590e-16 Identity = 50/122 (40.98%), Postives = 61/122 (50.00%), Query Frame = 1
Query: 10 CRPWDYADFTSRLGTFTPFNWFAKPPSASPLMCARYGWVNTGRDALACKCCSTELQYS-----EEQGT----DSFLSLLKSRHHPLCPWNGNACPVEFLQLPPMAAEDWCSEFLARLETLTA 348
CRPW++ADF SR+ +F+ +WFAKP S CAR+GW N+G D L C CC L + E G F L + H LCPW GN P F LP F+ RLE L A
Sbjct: 56 CRPWEHADFLSRVSSFSIASWFAKPDVISAFECARHGWRNSGPDQLHCNCCKQFLCFKIDDKLSEAGALKVAKKFAEQLVAGHTQLCPWQGNPSPEAFTTLPIATKRQVYEGFMDRLEELVA 177
BLAST of mRNA_S-dermatodea_contig116.1016.1 vs. uniprot
Match: A0A8K1CEY1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CEY1_PYTOL) HSP 1 Score: 91.3 bits (225), Expect = 1.720e-15 Identity = 45/120 (37.50%), Postives = 62/120 (51.67%), Query Frame = 1
Query: 10 CRPWDYADFTSRLGTFTPFNWFAKPPSASPLMCARYGWVNTGRDALACK------CCSTELQYSEE---QGTDSFLSLLKSRHHPLCPWNGNACPVEFLQLPPMAAEDWCSEFLARLETL 342
CR W +ADF RL T+ WFAKP + SPL+CAR+GWVNT D L C CC+ + + S++ + F L + H +CPW N P F LP ++ + R+E L
Sbjct: 64 CRAWSHADFLQRLATYGIATWFAKPKAISPLVCARFGWVNTASDMLQCAHCEEYLCCAIDDKLSKDGVKAVAERFAGQLATSHADMCPWKSNPSPESFTVLPILSPHQVSDDITTRMEKL 183
BLAST of mRNA_S-dermatodea_contig116.1016.1 vs. uniprot
Match: A0A6P8HAJ1_ACTTE (uncharacterized protein LOC116287189 n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8HAJ1_ACTTE) HSP 1 Score: 90.9 bits (224), Expect = 5.490e-15 Identity = 51/123 (41.46%), Postives = 60/123 (48.78%), Query Frame = 1
Query: 10 CRPWDYADFTSRLGTFTPFNWFAKPPSASPLMCARYGWVNTGRDALACKCCSTELQ------YSEEQGTDSFLSLLKSR---HHPLCPWNGNACPVEFLQLPPMAAEDWCSEFLARLETLTAL 351
C+P F SR+ TF+PF WFAKP SPL CA YGW N+ D L C C L + E T S L S H LCPW N CP F+QLP W +FL R +L +L
Sbjct: 2 CQPRTKEAFWSRVETFSPFTWFAKPLELSPLHCALYGWENSDVDILHCVSCKASLDATMSTDWDPEMFTKSCKQLKDSLVIGHSKLCPWPDNPCPEIFIQLPAYTPSQWKEDFLIRWHSLLSL 124
BLAST of mRNA_S-dermatodea_contig116.1016.1 vs. uniprot
Match: A0A835IPN4_9MAGN (C3HC-type domain-containing protein n=1 Tax=Coptis chinensis TaxID=261450 RepID=A0A835IPN4_9MAGN) HSP 1 Score: 92.0 bits (227), Expect = 5.800e-15 Identity = 42/106 (39.62%), Postives = 54/106 (50.94%), Query Frame = 1
Query: 1 KPSCRPWDYADFTSRLGTFTPFNWFAKPPSASPLMCARYGWVNTGRDALACKCCSTELQY---------SEEQGTDSFLSLLKSRHHPLCPWNGNACPVEFLQLPP 291
+PSCRPW+ D RL TF P NW KP ASPL CAR GWV+ D + C+ C + L + + ++F L H CPW GN+C +Q PP
Sbjct: 97 QPSCRPWERGDLLRRLATFHPSNWSGKPKIASPLACARRGWVSVDVDRIVCESCGSNLSFVLLASWTPTEADIAGEAFAKQLDVAHGTSCPWRGNSCAESLVQFPP 202
BLAST of mRNA_S-dermatodea_contig116.1016.1 vs. uniprot
Match: A0A2P4Y8F5_9STRA (P-loop containing nucleoside triphosphate hydrolase n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y8F5_9STRA) HSP 1 Score: 89.0 bits (219), Expect = 8.780e-15 Identity = 45/118 (38.14%), Postives = 59/118 (50.00%), Query Frame = 1
Query: 10 CRPWDYADFTSRLGTFTPFNWFAKPPSASPLMCARYGWVNTGRDALACKCCSTELQYSEEQGTDS---------FLSLLKSRHHPLCPWNGNACPVEFLQLPPMAAEDWCSEFLARLE 336
CRPWD+ADF +R+ +F+ +WFAKP + CAR+GW N+ D L C CC+ L + + F L + H LCPW GN P F LP FL+RLE
Sbjct: 53 CRPWDHADFLTRVSSFSIASWFAKPDVINAFECARHGWRNSAPDQLYCNCCNQFLCFKIDDKLSEAGALKVAIVFAGQLVTGHTQLCPWRGNPSPEAFTTLPIATKRQVYEIFLSRLE 170
BLAST of mRNA_S-dermatodea_contig116.1016.1 vs. uniprot
Match: A0A1S2YR33_CICAR (uncharacterized protein LOC101510093 isoform X1 n=2 Tax=Cicer arietinum TaxID=3827 RepID=A0A1S2YR33_CICAR) HSP 1 Score: 90.9 bits (224), Expect = 9.430e-15 Identity = 51/133 (38.35%), Postives = 64/133 (48.12%), Query Frame = 1
Query: 10 CRPWDYADFTSRLGTFTPFNWFAKPPSASPLMCARYGWVNTGRDALACKCCSTELQYSE---------EQGTDSFLSLLKSRHHPLCPWNGNACPVEFLQLPPMAAEDWCSEFLARLETLTALATATALPAVS 381
CRPWD ADF +RL TF +WFAKP S + CAR GW+N D +AC+ C L +S E+ F L + H LCPW NAC + PP+ F R L L +ALP +S
Sbjct: 80 CRPWDRADFMTRLATFKSISWFAKPKIVSAVNCARRGWINVDVDTIACEECGARLLFSTPASWNHQQVEKAALVFSLKLDNGHRLLCPWIDNACSETVARFPPITPPLLVDNFRERCSALLQL---SALPRIS 209
BLAST of mRNA_S-dermatodea_contig116.1016.1 vs. uniprot
Match: UPI001CF2A2D0 (nuclear-interacting partner of ALK-like n=2 Tax=Acropora TaxID=6127 RepID=UPI001CF2A2D0) HSP 1 Score: 89.0 bits (219), Expect = 2.100e-14 Identity = 53/155 (34.19%), Postives = 71/155 (45.81%), Query Frame = 1
Query: 34 FTSRLGTFTPFNWFAKPPSASPLMCARYGWVNTGRDALACKCCSTELQYSEEQGTDSFL---------SLLKSRHHPLCPWNGNACPVEFLQLPPMAAEDWCSEFLARLETLTALATATALPAVSLPSDFEEQCPGGLSTLLTKSRPLLANGSRC 471
F +R+ TF+PF WFAKP S SPL CA++GW N+ D L C C L + D + L S H LCPW N CP F++LP + W ++ AR ++ LA L D + PG + L L+ GS C
Sbjct: 53 FWNRVETFSPFTWFAKPLSLSPLHCAQFGWENSEVDILRCVLCKATLDATISTTWDPDMYSKTCEQLNEALVSGHSKLCPWPDNPCPESFVRLPIYSYSQWLDDYRARWRSIVTLADDIPLVDEQAIKDMDGLSPGHIEGLQN----LVDAGSLC 203
BLAST of mRNA_S-dermatodea_contig116.1016.1 vs. uniprot
Match: A0A425CSQ8_9STRA (C3HC-type domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A425CSQ8_9STRA) HSP 1 Score: 85.1 bits (209), Expect = 3.580e-14 Identity = 40/101 (39.60%), Postives = 52/101 (51.49%), Query Frame = 1
Query: 10 CRPWDYADFTSRLGTFTPFNWFAKPPSASPLMCARYGWVNTGRDALACKCCSTELQY---------SEEQGTDSFLSLLKSRHHPLCPWNGNACPVEFLQL 285
C P + ADF +R+ TF+ NWFAKP + L CAR+GW+N+G D LACKCC L ++ + L S H CPW N P F Q+
Sbjct: 34 CHPNNRADFQARVATFSSINWFAKPTELNLLTCARFGWINSGPDELACKCCGQTLSCRIDSRLGPEGAKKVAEGLRGYLTSHHLDTCPWKHNPSPTSFAQV 134 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig116.1016.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig116.1016.1 >prot_S-dermatodea_contig116.1016.1 ID=prot_S-dermatodea_contig116.1016.1|Name=mRNA_S-dermatodea_contig116.1016.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=373bp MCARYGWVNTGRDALACKCCSTELQYSEEQGTDSFLSLLKSRHHPLCPWNback to top mRNA from alignment at S-dermatodea_contig116:13681..22634+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig116.1016.1 ID=mRNA_S-dermatodea_contig116.1016.1|Name=mRNA_S-dermatodea_contig116.1016.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=8954bp|location=Sequence derived from alignment at S-dermatodea_contig116:13681..22634+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig116:13681..22634+ >mRNA_S-dermatodea_contig116.1016.1 ID=mRNA_S-dermatodea_contig116.1016.1|Name=mRNA_S-dermatodea_contig116.1016.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=2238bp|location=Sequence derived from alignment at S-dermatodea_contig116:13681..22634+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |