prot_S-dermatodea_contig11586.1007.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig11586.1007.1
Unique Nameprot_S-dermatodea_contig11586.1007.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length149
Homology
BLAST of mRNA_S-dermatodea_contig11586.1007.1 vs. uniprot
Match: D7FV32_ECTSI (Palmitoyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV32_ECTSI)

HSP 1 Score: 160 bits (405), Expect = 7.470e-43
Identity = 89/145 (61.38%), Postives = 101/145 (69.66%), Query Frame = 0
Query:    1 MIAMALLVGIPLLRLWWYHVQTILGKGQTTNEDMRGVYQYHPNQYNKGCMKNSYSLLCAAIPPSRLPDLSELVYVNEPLSARGSHS-----PRDSRSSSWISPEGGFTFMGEEDGEYEHRRRWAQKARQARAESRRNCIGGSSER 140
            M AMALLVGIPLLRLWWYH+QTIL KGQTTNEDMR VY+ H N Y+KGC +NS SLLCA  P SRLPDLSE VYVNEPL++RGS +      R SR+ SWISP GGF F+G+ DG+   +RR            R    GGSS R
Sbjct:  258 MTAMALLVGIPLLRLWWYHLQTILCKGQTTNEDMRAVYRNHHNSYHKGCWQNSVSLLCAPAPRSRLPDLSERVYVNEPLASRGSGTRWGDGERGSRTFSWISPAGGFGFLGDSDGDCSDQRRQXXXXXXXGRPPRVLSAGGSSRR 402          
BLAST of mRNA_S-dermatodea_contig11586.1007.1 vs. uniprot
Match: A0A6H5J901_9PHAE (Palmitoyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J901_9PHAE)

HSP 1 Score: 157 bits (396), Expect = 8.730e-42
Identity = 80/116 (68.97%), Postives = 91/116 (78.45%), Query Frame = 0
Query:    1 MIAMALLVGIPLLRLWWYHVQTILGKGQTTNEDMRGVYQYHPNQYNKGCMKNSYSLLCAAIPPSRLPDLSELVYVNEPLSARGSHS-----PRDSRSSSWISPEGGFTFMGEEDGE 111
            M AMALLVGIPLLRLWWYH+QTIL KGQTTNEDMR VY+ H N Y+KGC +NS SLLCA  P SRLPDLSE VY NEPL++RGS +      R SR+ SWISP GGF F+G+ DG+
Sbjct:  329 MTAMALLVGIPLLRLWWYHLQTILCKGQTTNEDMRAVYRNHHNSYHKGCWQNSVSLLCAPAPRSRLPDLSERVYANEPLASRGSGTRWGDGERGSRTFSWISPAGGFGFLGDSDGD 444          
BLAST of mRNA_S-dermatodea_contig11586.1007.1 vs. uniprot
Match: A0A7R9YF71_9STRA (Palmitoyltransferase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YF71_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 7.670e-11
Identity = 35/71 (49.30%), Postives = 46/71 (64.79%), Query Frame = 0
Query:   12 LLRLWWYHVQTILGKGQTTNEDMRGVYQYHPNQYNKGCMKNSYSLLCAAIPPSRLPDLSELVYVNEPLSAR 82
            LL LW YH++ ++  GQTTNE +RGV+ +  N ++ GCM N  S+L   IPPS L D+SELV V     AR
Sbjct:   80 LLSLWLYHLR-LMAIGQTTNEAVRGVFDFRTNPHDHGCMNNISSVLQTRIPPSGLADMSELVTVQGSAQAR 149          
BLAST of mRNA_S-dermatodea_contig11586.1007.1 vs. uniprot
Match: A0A7S1TV38_9STRA (Palmitoyltransferase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TV38_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 2.510e-8
Identity = 32/72 (44.44%), Postives = 43/72 (59.72%), Query Frame = 0
Query:   12 LLRLWWYHVQTILGKGQTTNEDMRGVYQYHPNQYNKGCMKNSYSLLCAAIPPSRLPDLSELVYVNEPLSARG 83
            LL LW YH++ +L  GQTTNE +RG++ +  N  + GCM N   +    +PPS LP L ELV    P +A G
Sbjct:  197 LLSLWLYHLR-LLSIGQTTNEAVRGIFDFRDNPNDHGCMNNIKHVFMTKVPPSVLPPLEELVVPCTPGAAPG 267          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11586.1007.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FV32_ECTSI7.470e-4361.38Palmitoyltransferase n=1 Tax=Ectocarpus siliculosu... [more]
A0A6H5J901_9PHAE8.730e-4268.97Palmitoyltransferase n=1 Tax=Ectocarpus sp. CCAP 1... [more]
A0A7R9YF71_9STRA7.670e-1149.30Palmitoyltransferase n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S1TV38_9STRA2.510e-844.44Palmitoyltransferase n=1 Tax=Phaeomonas parva TaxI... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..25
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..149
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..22
score: 0.676

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig11586contigS-dermatodea_contig11586:4956..6785 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig11586.1007.1mRNA_S-dermatodea_contig11586.1007.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig11586 4956..6812 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig11586.1007.1 ID=prot_S-dermatodea_contig11586.1007.1|Name=mRNA_S-dermatodea_contig11586.1007.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=149bp
MIAMALLVGIPLLRLWWYHVQTILGKGQTTNEDMRGVYQYHPNQYNKGCM
KNSYSLLCAAIPPSRLPDLSELVYVNEPLSARGSHSPRDSRSSSWISPEG
GFTFMGEEDGEYEHRRRWAQKARQARAESRRNCIGGSSERGRYDDLHPS
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