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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 8 |
| Model size | 1073 |
| Cds size | 708 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig1158.1005.1 >prot_S-dermatodea_contig1158.1005.1 ID=prot_S-dermatodea_contig1158.1005.1|Name=mRNA_S-dermatodea_contig1158.1005.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=236bp
MAEIQAGIAEVRRAWSGDMAQIVADKQSTAVDTKALEQRLAALFDDTTRQ
EQLPTLEGRQGRLAETGPRLSMEREEVQRQGKQDAAKVVEMRTQLHGNIQ
RRQLLTDQLAAVGKAIAAHSINEPDFGKRKAEYESLASKIVALRTTQANL
ETRKAALGEDHRLASEEFASATAATRGEITRLNEENNGIVVERKAAAAAF
TPIQLNAVRAQTELASLEGHDCQGMRNILVLAASS* back to topmRNA from alignment at S-dermatodea_contig1158:4237..7403+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-dermatodea_contig1158.1005.1 ID=mRNA_S-dermatodea_contig1158.1005.1|Name=mRNA_S-dermatodea_contig1158.1005.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=3167bp|location=Sequence derived from alignment at S-dermatodea_contig1158:4237..7403+ (Saccorhiza dermatodea SderLu1190fm monoicous)
TTGAGCGGTTGACGTGCTTGGATGGACGGCAGAGCGAGTCGGCCAACAAC
AAGGTGCCCTAGGTGGACGGCCCCCGTGTCCAGCAGCTCGTGGATGATGC
AATTGCATGGAAAGCGATGCGCTTGTTGAGCTCTTCTCGCCCCCGCCTCC
GCCGACTATAATAGCGGTGGAAGTATCTGAGCATACGAGCCACGTCGTTA
CGGGCAACCTTGCTGCGCCTTCACGCCCCGGCCGAGCCATGGAGTGCTAC
CACTGCTGTGGACATCTGCACATGATGGCCCTGTTATTTTGTAGAAGATA
CATGTGTGCTATGAACGGTATCTATAACTTAACATCTAGCCTACATAGCA
CCGCCTCCAGTACAGTACTGACGGTTGCTTTTGTCGATGAACGTGGCGTG
TCAACACTGCAGCAAGATATCAAGATCCGGAATTTCCCCGGAGAGAACCG
TGCGAAAGAAAACGAACTCCAAGAGCTAGCTGACAGAATCAGTGAGCTAG
AAGTCCAGGTCAAGGCTCAAGAGGACGACGATGCCGCCGCTGGAGCCGCA
CGCGCCGCATCTCTGGAGGTGCGACGTGGTCATGACGTCCTAGTTTTAGG
CTGTGGGCGTGGACGGGCTTGCGCTCAATGATATTGTGCATTACCGCTGA
GCCTCTGTTGTTGTATCAGTGGCGGCGACGCCCCGGTCGGCGGTTCAAGC
CCCACTCGAGACAGTTGTTCTAATTGTTTCAACCTCCGTCGTGGAAAGCG
TGAGAGCACAAGTACACAACCTTCGTTTAGTAGAGAGAGCTGAGGGAATT
GGCTGACCCCCATCCGCTGTAAAAATTGAAGGCTGGCTACAGTAGCACCG
GGGAAAGAGTGAAGGATCCCTTGCGATCGCGGACTGTCCAGCTGGCACGG
ATAGTTCTACGCGATGCCAAGAAAAACTCAAATGCTACTGTGTGGTGTCC
GTGACGTGAGACTGTTGAACGCACATCTGCACCGTATCAACTGCAGCGCA
CTCCCCATGCAAAACCCTGTGCAGGCCACCGTTGCGCTTCGGGCTGAACT
AGCGATTCTGAAAAAGCGGCTGGAAACTGCTGTATCAGACCTTGAGCAGC
GCGTTTGCGAGATGGCAGAGATCCAGGCAGGCATTGCAGAGGTTAGGCGC
GCTTGGAGTGGTGAGCGCAACTGACCTACCAACTTATCGCGCATTGCAGC
CTCCGGACGATCGTCAGCGCAGTAGACACAACGGTAGAGCTACAGTTTTA
GTGTTTTCGTCTCAGTAACTTTGCAAGAGCTCCAGCTGACATTTTAGGTG
AAGATACCAACATTTTATGAGGCCATCGCGTGGGCCACTTAGATGTCACA
GCTTTTGGTCACATTCTTGCTGGCTGAGAGTAGTTGGCACATGGCATTGA
GTATGCCAGACCCCAACTGTTTTCGAGAGGCGCGCTTGGAAACGCATTAA
AGTACAAAATGGTCGACGTACAGGAGCTTGATACAACCTCGCGTTTGCGT
ATCAATACATAGAGCCCTATAGCAGAAGGTTTCATTTTGTATATCAGAGA
CTTGACAAGCCCCCATCCAACCCCACCCCTGTCCTCCCCTTGAAGGGGAT
ATGGCGCAGATCGTTGCTGACAAGCAGTCTACCGCTGTCGACACAAAAGC
ACTAGAACAGCGCCTGGCTGCGCTTTTCGACGACACTACGCGCCAGGTGA
TGTACACGACACGAAAAAATCTCGGCCTCAATCGCCTGTAGTTGTTTGAC
ACCGTGCCACGGTCGAAGCGATTTGGGTACAATACACGGGGCACTTATTC
ATCACAGCTAACGGCACTAGGGCGGACATCGCGTTCCCAGGAACAACTTC
CTACGCTCGAAGGAAGACAGGGGAGGTTAGCTGAAACTGGCCCAAGACTT
TCGATGGAGAGGGAGGAGGTCCAGCGACAGGGCAAGCAGGATGCTGCCAA
GGTGAAAGCTTCTTCAAAAACACTCGCTGCGAAGTGATCGAGCACTCGAG
GGTGTTGGGCATCCTTATTTTGTAGCAGCTGTACTTGAGTCCGATTGCAG
CATTCATGGTCTACAACCCACGTCGATGGACTTTTCTGCTCCACTCTATT
TAGGTGGTTGAGATGAGAACGCAGCATTCATGGTCTACAACCCACGTCGA
TGGACTTTTCTGCTCCACTCTATTTAGGTGGTTGAGATGAGAACGCAGCT
GCACGGAAACATTCAACGACGACAGCTTCTGACAGACCAGCTAGCTGCAG
TAGGAAAGGCCATCGCTGCTCACAGCATCAACGAACCCGACTTCGGCAAG
AGGAAGGCGGAGTATGAAAGCCTGGCATCGAAGATCGTCGCCCTTCGGCA
AGTGTGCGGTCTGTATCAAGGAATATTTTCGCTTTGTTTCCGTGTTTCTT
CCTAGAGCGGGGCTCTTTGCATCGCCGGCTTCTTGAGAATTGCACAACCT
AAGGCGCAAGTTTGGCCGTACTCGTATACCGTCAATTTTCAAATCCCAGA
ACGACCCAGGCGAACCTTGAGACTCGCAAGGCTGCCTTAGGAGAGGACCA
CCGGCTCGCTTCAGAAGAGTTTGCATCAGCGACAGCGGCAACCAGGGGCG
AGATCACCCGTTTGAACGAGGTAAACACGGCTTGTCTGCTGACCGCCGAT
GAGGATGCCATGATTTCGTGCGCTGGTGTATACTAGGCACTCAGCGGTTT
GTGCTAGCCCAGTTGTAATATTATCTCTGAAGGGTCTACATGCTTTACTG
CAACGCACACCCGCTTGAGTTGAACGTCACTCCTATCCATGATCAGAACA
TTTTCTACCTGGACGTCGCCTGGTAAACGTGAGGAAGCAAGAGGTGTCTC
GTTCCGTTTGATGCAATTCTAAAATTATCGTTTCTGACTTTGGAGACTCA
AACCACAGCATGGCTCAGTTTCTGGAGCGAACACGATTGCAGGAGAACAA
TGGCATCGTGGTGGAGAGGAAGGCAGCAGCGGCAGCTTTCACCCCGATTC
AACTCAACGCCGTTCGGGCGCAAACAGAACTGGCATCTCTTGAAGGTCAT
GATTGCCAGGGGATGCGCAATATTCTTGTTCTGGCAGCCTCAAGTTGAAC
CATTCCCGCATTATATCTTCAGCCCGATAGTGTTTCCCCCGAATAATTAT
CGCCAACATAACTGCTG back to topCoding sequence (CDS) from alignment at S-dermatodea_contig1158:4237..7403+ >mRNA_S-dermatodea_contig1158.1005.1 ID=mRNA_S-dermatodea_contig1158.1005.1|Name=mRNA_S-dermatodea_contig1158.1005.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1416bp|location=Sequence derived from alignment at S-dermatodea_contig1158:4237..7403+ (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGGCAGAGATCCAGGCAGGCATTGCAGAGGTTAGGCGCGCTTGGAGTGA
TGGCAGAGATCCAGGCAGGCATTGCAGAGGTTAGGCGCGCTTGGAGTGGG
GATATGGCGCAGATCGTTGCTGACAAGCAGTCTACCGCTGTCGACACAAA
AGCACTAGAACAGCGCCTGGCTGCGCTTTTCGACGACACTACGCGCCAGG
GGATATGGCGCAGATCGTTGCTGACAAGCAGTCTACCGCTGTCGACACAA
AAGCACTAGAACAGCGCCTGGCTGCGCTTTTCGACGACACTACGCGCCAG
GAACAACTTCCTACGCTCGAAGGAAGACAGGGGAGGTTAGCTGAAACTGG
CCCAAGACTTTCGATGGAGAGGGAGGAGGTCCAGCGACAGGGCAAGCAGG
ATGCTGCCAAGGAACAACTTCCTACGCTCGAAGGAAGACAGGGGAGGTTA
GCTGAAACTGGCCCAAGACTTTCGATGGAGAGGGAGGAGGTCCAGCGACA
GGGCAAGCAGGATGCTGCCAAGGTGGTTGAGATGAGAACGCAGCTGCACG
GAAACATTCAACGACGACAGCTTCTGACAGACCAGCTAGCTGCAGTAGGA
AAGGCCATCGCTGCTCACAGCATCAACGAACCCGACTTCGGCAAGAGGAA
GGCGGAGTATGAAAGCCTGGCATCGAAGATCGTCGCCCTTCGGTGGTTGA
GATGAGAACGCAGCTGCACGGAAACATTCAACGACGACAGCTTCTGACAG
ACCAGCTAGCTGCAGTAGGAAAGGCCATCGCTGCTCACAGCATCAACGAA
CCCGACTTCGGCAAGAGGAAGGCGGAGTATGAAAGCCTGGCATCGAAGAT
CGTCGCCCTTCGAACGACCCAGGCGAACCTTGAGACTCGCAAGGCTGCCT
TAGGAGAGGACCACCGGCTCGCTTCAGAAGAGTTTGCATCAGCGACAGCG
GCAACCAGGGGCGAGATCACCCGTTTGAACGAGAACGACCCAGGCGAACC
TTGAGACTCGCAAGGCTGCCTTAGGAGAGGACCACCGGCTCGCTTCAGAA
GAGTTTGCATCAGCGACAGCGGCAACCAGGGGCGAGATCACCCGTTTGAA
CGAGGAGAACAATGGCATCGTGGTGGAGAGGAAGGCAGCAGCGGCAGCTT
TCACCCCGATTCAACTCAACGCCGTTCGGGCGCAAACAGAACTGGCATCT
CTTGAAGGTCATGATTGCCAGGGGATGCGCAATATTCTTGTTCTGGCAGC
CTCAAGTTGAGAGAACAATGGCATCGTGGTGGAGAGGAAGGCAGCAGCGG
CAGCTTTCACCCCGATTCAACTCAACGCCGTTCGGGCGCAAACAGAACTG
GCATCTCTTGAAGGTCATGATTGCCAGGGGATGCGCAATATTCTTGTTCT
GGCAGCCTCAAGTTGA back to top
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