mRNA_S-dermatodea_contig11479.961.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig11479.961.1 vs. uniprot
Match: D7G2C7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2C7_ECTSI) HSP 1 Score: 354 bits (909), Expect = 8.320e-110 Identity = 192/257 (74.71%), Postives = 209/257 (81.32%), Query Frame = 2
Query: 2 VPTPAKRDLSMVYLEAFRHSTIVVRLELLVGQGALAPDAMALDDPEATTGGLTVLGGGFLTVLSVLGSSIAHVNPTFVFDELVVTHYCGSVRGLSGLVLTALTHQAVAQGYKVVGSMELLGDPLSLVSKLGDSVVQFFHKTKAEMTGDADTMGAGAKVLVKGLVGGTFGSAAKITGVCVELHANWFPSGQHSFTIPSQRDSPTPHLARLR----------QVFYESMKAGLSGLIDLPTEGAKEEGLAGFIAGMAKG 742
VPTPAKRDLSMVY+EAFRHSTIVVR+EL VGQ AL+PDA AL+DPE TTGGLTVLGGGFLTVLSVLGSSIAHVNPTFVFDELVVTHYCGS GL+GLV+TALT QAVAQGYKVVGSMELLGDPLSLV KLGDSVVQFF KTKAEMTGDADT+GAGAKVLVKGLVGGTFGSAAKITG + + +R+ ++ +VFYE+MKAG++GLID P EGAKEEGLAGFIAGMAKG
Sbjct: 1049 VPTPAKRDLSMVYVEAFRHSTIVVRVELWVGQAALSPDAAALEDPETTTGGLTVLGGGFLTVLSVLGSSIAHVNPTFVFDELVVTHYCGSAGGLTGLVVTALTQQAVAQGYKVVGSMELLGDPLSLVGKLGDSVVQFFTKTKAEMTGDADTVGAGAKVLVKGLVGGTFGSAAKITGSLEGMIRGLSGTAIAENESEMEREEDGQLQREVKGLEHGVKQGGKVFYETMKAGITGLIDRPAEGAKEEGLAGFIAGMAKG 1305
BLAST of mRNA_S-dermatodea_contig11479.961.1 vs. uniprot
Match: A0A6H5KWU7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWU7_9PHAE) HSP 1 Score: 338 bits (867), Expect = 3.810e-103 Identity = 190/284 (66.90%), Postives = 209/284 (73.59%), Query Frame = 2
Query: 2 VPTPAKRDLSMVYLEAFRHSTIVVRLELLVGQGALAPDAMALDDPEATTGGLTVLGGGFLTVLSVLGS---------------------------SIAHVNPTFVFDELVVTHYCGSVRGLSGLVLTALTHQAVAQGYKVVGSMELLGDPLSLVSKLGDSVVQFFHKTKAEMTGDADTMGAGAKVLVKGLVGGTFGSAAKITGVCVELHANWFPSGQHSFTIPSQRDSPTPHLARLR----------QVFYESMKAGLSGLIDLPTEGAKEEGLAGFIAGMAKG 742
VPTPAKRDLSMVY+EAFRHSTIVVR+EL VGQ AL+PDA AL+DPE TTGGLTVLGGGFLTVLSVLGS SIAHVNPTFVFDELVVTHYCGS GL+GLV+TALT QAVAQGYKVVGSMELLGDPLSLV KLGDSVVQFF KTKAEMTGDADT+GAGAK+LVKGLVGGTFGSAAKITG + + +R+ ++ ++FYE+MKAG++GLID P EGAKEEGLAGFIAGMAKG
Sbjct: 2683 VPTPAKRDLSMVYVEAFRHSTIVVRVELWVGQAALSPDAAALEDPETTTGGLTVLGGGFLTVLSVLGSRRVPCSLIVIALACRCSWVTILWAETLSIAHVNPTFVFDELVVTHYCGSAGGLTGLVVTALTQQAVAQGYKVVGSMELLGDPLSLVGKLGDSVVQFFTKTKAEMTGDADTVGAGAKLLVKGLVGGTFGSAAKITGSLEGMIRGLSGTAIAENESEMEREDDGQLQREVKDLEQGVKQGGKIFYETMKAGITGLIDRPAEGAKEEGLAGFIAGMAKG 2966
BLAST of mRNA_S-dermatodea_contig11479.961.1 vs. uniprot
Match: A0A835YJU6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJU6_9STRA) HSP 1 Score: 213 bits (542), Expect = 3.190e-61 Identity = 138/326 (42.33%), Postives = 174/326 (53.37%), Query Frame = 2
Query: 11 PAKRDLSMVYLEAFRHSTIVVRLELLVGQGALAPDA-----------------------------------------MALDDPEATTGGLTVLGGGFLTVLSVLGSSIAHVNPTFVFDELVVTHYCGSVRGLSGLVLTALTHQAVAQGYK---------------------------VVGSMELLGDPLSLVSKLGDSVVQFFHKTKAEMTGDADTMGAGAKVLVKGLVGGTFGSAAKITGVCVELHANWFPSGQHSFTIPSQRDSPTPHLARLRQ------------VFYESMKAGLSGLIDLPTEGAKEEGLAGFIAGMAKGIV 748
PA+ D S+VYLE FRH+ I V+LEL VGQ AL+ + +A +DP+A GGL VLGG FL+ + VLG ++A ++PTFVFDEL+VTHY GS R L+ + L Q VAQGYK VVGSMELLGDPL+LV+KL DSV+QF T+AE G+ T GAGA++LV G+VGG FGSAAKI G ++ SG D+ HL Q V Y+S++ G+SGL+D P EGAKEEG+AGF+ GMAKGIV
Sbjct: 210 PARHDHSLVYLEMFRHAPIAVQLELYVGQRALSLETTPAIEDTDAARSMLAHEDLDAAAQAHALPFYRKISLTFNKTLANEDPDAA-GGLAVLGGSFLSAVGVLGGTLARISPTFVFDELLVTHYFGSARELAAALARGLVQQGVAQGYKXXXXXXXXXXXXXXXXXXXPGSERSYKVVGSMELLGDPLALVNKLSDSVLQFLRTTQAEFRGEEPTFGAGARMLVSGVVGGAFGSAAKIAGSLEDVIRGL--SGTEVADAEGGGDTRVRHLKHGFQRGGQXXXXXXXXVLYDSIQQGISGLVDRPMEGAKEEGVAGFLTGMAKGIV 532
BLAST of mRNA_S-dermatodea_contig11479.961.1 vs. uniprot
Match: A0A7S2GN42_9STRA (Hypothetical protein (Fragment) n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GN42_9STRA) HSP 1 Score: 182 bits (461), Expect = 1.250e-50 Identity = 103/250 (41.20%), Postives = 153/250 (61.20%), Query Frame = 2
Query: 2 VPTPAKRDLSMVYLEAFRHSTIVVRLELLVGQGALAPDAMALDDPEATTGGLTVLGGGFLTVLSVLGSSIAHVNPTFVFDELVVTHYCGSVRGLSGLVLTALTHQAVAQGYKVVGSMELLGDPLSLVSKLGDSVVQFFHKTKAEMTGDADTMGAGAKVLVKGLVGGTFGSAAKITGVCVELHANWFPSGQHSFTIPSQRDSPTPHLARLRQVFYESMKAGLSGLIDLPTEGAKEEGLAGFIAGMAKGIVG 751
+ P + ++Y+E HS+IVV+LE++VG L D +A D+ G+ ++G ++L VLGSS+AH+NPTF F+EL + G L+ + +L Q VAQGYKVVGSMELLGDP+SLVS +G V QFF KT A+M G+++T G G K L +G+VGGTFGS AKITG L + +GQ+ + + + + + + G++G++ P EGA++ G+ GF+ G+ KG+VG
Sbjct: 205 IKAPHYTNSGLIYIETLYHSSIVVQLEVMVGSRNLNTDDLADDEQR----GVWLMGSSLWSMLVVLGSSLAHINPTFQFNELKLADSFGQRWDLASSIFMSLVKQGVAQGYKVVGSMELLGDPVSLVSNMGVGVYQFFRKTGADMLGESETRGEGVKHLFQGVVGGTFGSVAKITGAADTLLSA--VTGQNERDNWQRPEHVGQGIVIGSERVWRGVTEGITGIVVRPIEGAQQNGVPGFLFGLGKGVVG 448
BLAST of mRNA_S-dermatodea_contig11479.961.1 vs. uniprot
Match: W7U3K2_9STRA (Ph domain containing protein n=4 Tax=Monodopsidaceae TaxID=425072 RepID=W7U3K2_9STRA) HSP 1 Score: 157 bits (396), Expect = 6.050e-40 Identity = 101/292 (34.59%), Postives = 151/292 (51.71%), Query Frame = 2
Query: 32 MVYLEAFRHSTIVVRLELLVGQGALAP----------------DAMALDDP--EATTGGLTVLGGGFLTVLSVLGSSIAHVNP-TFVFDELVVTHYCGSVRGLSGLVLTALTHQAVAQGYKVVGSMELLGDPLSLVSKLGDSVVQFFHKTKAEMTGDADTMGAGAKVLVKGLVGGTFGSAAKITGVCVEL---------HANWFPSGQHSFTIPSQ--------------------RDSPTPHLA----RLRQVFYESMKAGLSGLIDLPTEGAKEEGLAGFIAGMAKGIVG 751
+VY+E F HS+++V +EL+ G G ++ LD EA GL ++G G + +L+ + S+A ++ T VF+EL+ THY GS L +V+ +L QA+ Q YK++G+M+LLG+PL+L G VV+FF +T+AE+ GDAD+ G G + L K ++GG F S +KITG L A G S R P HL + +VFY+S+K+G+ + DLP +GA EG +GF+ GM KG+VG
Sbjct: 3904 LVYIELFHHSSLIVGMELVPGGGNFPSRKERAKQTGLPGNRMDGSLGLDQELDEALVSGLELIGTGVVQLLADMARSLAQLSGLTLVFNELLFTHYFGSHYDLGHIVVLSLRQQAITQSYKLLGAMDLLGNPLNLFLGFGSGVVEFFRRTQAELVGDADSKGEGLRRLAKAVIGGPFSSVSKITGTVASLLEEVVGVREMAAMAEEGMRDELSSSTARAIGHQTEDGGSSADGWRGRAPPPQHLGEGILKGGEVFYKSVKSGVKNIYDLPQQGASREGFSGFLKGMGKGVVG 4195
BLAST of mRNA_S-dermatodea_contig11479.961.1 vs. uniprot
Match: D8LB75_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB75_ECTSI) HSP 1 Score: 119 bits (297), Expect = 9.600e-27 Identity = 87/267 (32.58%), Postives = 129/267 (48.31%), Query Frame = 2
Query: 14 AKRDLSMVYLEAFRHSTIVVRLELLVGQ---GALAPDAMALDDPEATTGG---------LTVLGGGFLTVLSVLGSSIAHVNPTFVFDELVVTHYCGSVRGLSGLVLTALTHQAVAQGYKVVGSMELLGDPLSLVSKLGDSVVQFFHKTKAEMTGDADTMGAGAKVLVKGLVGGTFGSAAKITGV---------CVELHANWFPSGQHSFTIPSQRDSPTPHLARLRQVFYESMKAGLSGLIDLPTEGAKEEGLAGFIAGMAKGIVG 751
A + +Y+ + I V ++ +G L+ A D E GG L +GG +LS G+ IA+ +PTF FD + HY GS LV+ + Q V Q YKV+G +++LGDPLSL + V+ F KT A +G G+K LVKG+VGGT SA+K+T C++ A PSG S P L + F ++K G++G++ P GA++ G AGF+ G+ +G+VG
Sbjct: 2553 ADATVDRIYIGEYFQEEIEVAVDFHLGTKVAALLSSKPPADGDEEKDEGGFGASLAMMPLGAVGGVVWGLLSSFGAGIANASPTFNFDAYELEHYYGSKTQAVTLVVMSFVKQGVVQAYKVLGHIDILGDPLSLGMNISSGVIGFVTKT------GAGHIGEGSKDLVKGVVGGTASSASKMTDALDNFVREAGCMDAEA---PSGMESTKAPEHLGQG---LTQGMMYFGHTVKDGITGVVMKPVRGARKNGAAGFVKGVGQGVVG 2807
BLAST of mRNA_S-dermatodea_contig11479.961.1 vs. uniprot
Match: G5AC94_PHYSP (Uncharacterized protein n=11 Tax=Phytophthora TaxID=4783 RepID=G5AC94_PHYSP) HSP 1 Score: 116 bits (291), Expect = 6.010e-26 Identity = 78/240 (32.50%), Postives = 124/240 (51.67%), Query Frame = 2
Query: 32 MVYLEAFRHSTIVVRLELLVGQGALAPDAMALDDPEATTGGLTVLGGGFLTVLSVLGSSIAHVNPTFVFDELVVTHYCGSVRGLSGLVLTALTHQAVAQGYKVVGSMELLGDPLSLVSKLGDSVVQFFHKTKAEMTGDADTMGAGAKVLVKGLVGGTFGSAAKITGVCVELHANWFPSGQHSFTIPSQRDSPTPHLARLRQVFYESMKAGLSGLIDLPTEGAKEEGLAGFIAGMAKGIVG 751
+VY + R S++ V LE + + D +T GG +V+ G V+ ++GS+++ +PTF F E+V+ + + L ++ Q V Q Y++VGS +++G+P+ LV LG VV+F TK E+TGDA T G G KVL K +V S AKITG + + + S + DS + A L+ F + + G +G+ P EGA + G+ G + G +GI G
Sbjct: 2256 LVYFDILRISSLSVDLEYSITRK---------DIVSSTGGGHSVIFGFLSQVVGLIGSNLSG-SPTFSFSEIVIVRCFSTKQRLQSQLVANYVQQGVMQAYRLVGSADIIGNPIGLVEDLGSGVVEFLKITKGELTGDAQTRGEGVKVLGKTIVKSGASSVAKITGSLDKFVGEF--ADDSSASASGGNDSSSNDNAGLK--FAKDLGRGFTGIFTKPVEGAMKGGVTGLVQGTVQGIAG 2481
BLAST of mRNA_S-dermatodea_contig11479.961.1 vs. uniprot
Match: A0A662X4E4_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X4E4_9STRA) HSP 1 Score: 114 bits (285), Expect = 3.770e-25 Identity = 76/240 (31.67%), Postives = 121/240 (50.42%), Query Frame = 2
Query: 32 MVYLEAFRHSTIVVRLELLVGQGALAPDAMALDDPEATTGGLTVLGGGFLTVLSVLGSSIAHVNPTFVFDELVVTHYCGSVRGLSGLVLTALTHQAVAQGYKVVGSMELLGDPLSLVSKLGDSVVQFFHKTKAEMTGDADTMGAGAKVLVKGLVGGTFGSAAKITGVCVELHANWFPSGQHSFTIPSQRDSPTPHLARLRQVFYESMKAGLSGLIDLPTEGAKEEGLAGFIAGMAKGIVG 751
+VY + R S++ V LE + + D +T GG +V+ G ++ ++GS+++ +PTF F E+V+ + + L ++ Q V Q Y++VGS +++G+P+ LV LG VV+F TK E+TGDA T G G KVL K +V S AKITG + + +S T + A L+ F + + G +G+ P EGA G+ G + G +GI G
Sbjct: 2280 LVYFDILRISSLSVDLEYSITRK---------DIVSSTGGGHSVIFGFISQIIGLIGSNLSG-SPTFNFSEIVIVRCFSTKQRLQSQLIANYVQQGVMQAYRLVGSADIIGNPIGLVEDLGSGVVEFLKITKGELTGDAQTRGEGVKVLGKTIVKSGASSVAKITGSLDKFVGEFADDSANSXXXXXXXXXXTDN-AGLK--FAKDLGRGFTGIFTKPVEGAMRGGVTGLVQGTVQGIAG 2506
BLAST of mRNA_S-dermatodea_contig11479.961.1 vs. uniprot
Match: A0A484EGV5_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EGV5_BRELC) HSP 1 Score: 114 bits (284), Expect = 5.120e-25 Identity = 73/240 (30.42%), Postives = 124/240 (51.67%), Query Frame = 2
Query: 32 MVYLEAFRHSTIVVRLELLVGQGALAPDAMALDDPEATTGGLTVLGGGFLTVLSVLGSSIAHVNPTFVFDELVVTHYCGSVRGLSGLVLTALTHQAVAQGYKVVGSMELLGDPLSLVSKLGDSVVQFFHKTKAEMTGDADTMGAGAKVLVKGLVGGTFGSAAKITGVCVELHANWFPSGQHSFTIPSQRDSPTPHLARLRQVFYESMKAGLSGLIDLPTEGAKEEGLAGFIAGMAKGIVG 751
+VY + R S++ V LE + + D +T GG +++ GG ++ ++GS+++ +PTF F E+V+ + + L ++ Q V Q Y+++GS +++G+P+ LV LG VV+F TK E+TGDA T G G KVL K +V + S AKITG + + + + S + A ++ F + + G +G+ P EGA + G+ G + G +GI G
Sbjct: 2257 LVYFDLLRISSLSVDLEYSITRK---------DIVSSTGGGHSIVFGGLSQIIGLIGSNLSG-SPTFSFSEIVIVRCFTTKQRLQSQLVANYVQQGVLQAYRLIGSADIIGNPIGLVEDLGSGVVEFLKITKGEITGDAQTRGEGVKVLGKTIVKSSASSVAKITGSLDKFVGEFADENRQN----DDDGSMSTDNAGIK--FAKDLGRGFTGIFTKPVEGAMKGGVTGLVQGTVQGITG 2480
BLAST of mRNA_S-dermatodea_contig11479.961.1 vs. uniprot
Match: W2QD77_PHYPN (Uncharacterized protein n=15 Tax=Phytophthora TaxID=4783 RepID=W2QD77_PHYPN) HSP 1 Score: 114 bits (284), Expect = 5.120e-25 Identity = 76/245 (31.02%), Postives = 119/245 (48.57%), Query Frame = 2
Query: 32 MVYLEAFRHSTIVVRLELLVGQGALAPDAMALDDPEATTGGLTVLGGGFLTVLSVLGSSIAHVNPTFVFDELVVTHYCGSVRGLSGLVLTALTHQAVAQGYKVVGSMELLGDPLSLVSKLGDSVVQFFHKTKAEMTGDADTMGAGAKVLVKGLVGGTFGSAAKITGVCVELHANWFPSGQHSFTIPSQRDSPTPHLARLRQ-----VFYESMKAGLSGLIDLPTEGAKEEGLAGFIAGMAKGIVG 751
+VY + R S++ + LE + + D +T GG +V+ G ++ ++GS+++ +PTF F E+V+ + + L ++ Q V Q Y++VGS +++G+P+ LV LG VV+F TK E+TGDA T G G KVL K +V S AKITG F D P P + L F + + G +G+ P EGA + G+ G + G +GI G
Sbjct: 2257 LVYFDILRISSLSIDLEYSITRK---------DIVSSTGGGHSVIFGFLSQIIGLIGSNLSG-SPTFSFSEIVIVRCFSTKQRLQSQLVANYVQQGVMQAYRLVGSADIIGNPIGLVEDLGSGVVEFLKITKGELTGDAQTRGEGVKVLGKTIVKSGASSVAKITG------------SLDKFVGEFSDDKPDPSVEDLSNDNAGIKFAKDLGRGFTGIFTKPVEGAMKGGVTGLVQGTVQGIAG 2479 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11479.961.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig11479.961.1 >prot_S-dermatodea_contig11479.961.1 ID=prot_S-dermatodea_contig11479.961.1|Name=mRNA_S-dermatodea_contig11479.961.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=240bp MVYLEAFRHSTIVVRLELLVGQGALAPDAMALDDPEATTGGLTVLGGGFLback to top mRNA from alignment at S-dermatodea_contig11479:3802..6852- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig11479.961.1 ID=mRNA_S-dermatodea_contig11479.961.1|Name=mRNA_S-dermatodea_contig11479.961.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=3051bp|location=Sequence derived from alignment at S-dermatodea_contig11479:3802..6852- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig11479:3802..6852- >mRNA_S-dermatodea_contig11479.961.1 ID=mRNA_S-dermatodea_contig11479.961.1|Name=mRNA_S-dermatodea_contig11479.961.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1440bp|location=Sequence derived from alignment at S-dermatodea_contig11479:3802..6852- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |