prot_S-dermatodea_contig11479.961.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig11479.961.1
Unique Nameprot_S-dermatodea_contig11479.961.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length240
Homology
BLAST of mRNA_S-dermatodea_contig11479.961.1 vs. uniprot
Match: D7G2C7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2C7_ECTSI)

HSP 1 Score: 334 bits (856), Expect = 1.590e-102
Identity = 182/247 (73.68%), Postives = 199/247 (80.57%), Query Frame = 0
Query:    1 MVYLEAFRHSTIVVRLELLVGQGALAPDAMALDDPEATTGGLTVLGGGFLTVLSVLGSSIAHVNPTFVFDELVVTHYCGSVRGLSGLVLTALTHQAVAQGYKVVGSMELLGDPLSLVSKLGDSVVQFFHKTKAEMTGDADTMGAGAKVLVKGLVGGTFGSAAKITGVCVELHANWFPSGQHSFTIPSQRDSPTPHLARLR----------QVFYESMKAGLSGLIDLPTEGAKEEGLAGFIAGMAKG 237
            MVY+EAFRHSTIVVR+EL VGQ AL+PDA AL+DPE TTGGLTVLGGGFLTVLSVLGSSIAHVNPTFVFDELVVTHYCGS  GL+GLV+TALT QAVAQGYKVVGSMELLGDPLSLV KLGDSVVQFF KTKAEMTGDADT+GAGAKVLVKGLVGGTFGSAAKITG    +      +         +R+        ++          +VFYE+MKAG++GLID P EGAKEEGLAGFIAGMAKG
Sbjct: 1059 MVYVEAFRHSTIVVRVELWVGQAALSPDAAALEDPETTTGGLTVLGGGFLTVLSVLGSSIAHVNPTFVFDELVVTHYCGSAGGLTGLVVTALTQQAVAQGYKVVGSMELLGDPLSLVGKLGDSVVQFFTKTKAEMTGDADTVGAGAKVLVKGLVGGTFGSAAKITGSLEGMIRGLSGTAIAENESEMEREEDGQLQREVKGLEHGVKQGGKVFYETMKAGITGLIDRPAEGAKEEGLAGFIAGMAKG 1305          
BLAST of mRNA_S-dermatodea_contig11479.961.1 vs. uniprot
Match: A0A6H5KWU7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWU7_9PHAE)

HSP 1 Score: 318 bits (814), Expect = 3.410e-96
Identity = 180/274 (65.69%), Postives = 199/274 (72.63%), Query Frame = 0
Query:    1 MVYLEAFRHSTIVVRLELLVGQGALAPDAMALDDPEATTGGLTVLGGGFLTVLSVLGS---------------------------SIAHVNPTFVFDELVVTHYCGSVRGLSGLVLTALTHQAVAQGYKVVGSMELLGDPLSLVSKLGDSVVQFFHKTKAEMTGDADTMGAGAKVLVKGLVGGTFGSAAKITGVCVELHANWFPSGQHSFTIPSQRDSPTPHLARLR----------QVFYESMKAGLSGLIDLPTEGAKEEGLAGFIAGMAKG 237
            MVY+EAFRHSTIVVR+EL VGQ AL+PDA AL+DPE TTGGLTVLGGGFLTVLSVLGS                           SIAHVNPTFVFDELVVTHYCGS  GL+GLV+TALT QAVAQGYKVVGSMELLGDPLSLV KLGDSVVQFF KTKAEMTGDADT+GAGAK+LVKGLVGGTFGSAAKITG    +      +         +R+        ++          ++FYE+MKAG++GLID P EGAKEEGLAGFIAGMAKG
Sbjct: 2693 MVYVEAFRHSTIVVRVELWVGQAALSPDAAALEDPETTTGGLTVLGGGFLTVLSVLGSRRVPCSLIVIALACRCSWVTILWAETLSIAHVNPTFVFDELVVTHYCGSAGGLTGLVVTALTQQAVAQGYKVVGSMELLGDPLSLVGKLGDSVVQFFTKTKAEMTGDADTVGAGAKLLVKGLVGGTFGSAAKITGSLEGMIRGLSGTAIAENESEMEREDDGQLQREVKDLEQGVKQGGKIFYETMKAGITGLIDRPAEGAKEEGLAGFIAGMAKG 2966          
BLAST of mRNA_S-dermatodea_contig11479.961.1 vs. uniprot
Match: A0A835YJU6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJU6_9STRA)

HSP 1 Score: 194 bits (492), Expect = 3.700e-54
Identity = 117/249 (46.99%), Postives = 147/249 (59.04%), Query Frame = 0
Query:   30 MALDDPEATTGGLTVLGGGFLTVLSVLGSSIAHVNPTFVFDELVVTHYCGSVRGLSGLVLTALTHQAVAQGYK---------------------------VVGSMELLGDPLSLVSKLGDSVVQFFHKTKAEMTGDADTMGAGAKVLVKGLVGGTFGSAAKITGVCVELHANWFPSGQHSFTIPSQRDSPTPHLARLRQ------------VFYESMKAGLSGLIDLPTEGAKEEGLAGFIAGMAKGIV 239
            +A +DP+A  GGL VLGG FL+ + VLG ++A ++PTFVFDEL+VTHY GS R L+  +   L  Q VAQGYK                           VVGSMELLGDPL+LV+KL DSV+QF   T+AE  G+  T GAGA++LV G+VGG FGSAAKI G   ++      SG          D+   HL    Q            V Y+S++ G+SGL+D P EGAKEEG+AGF+ GMAKGIV
Sbjct:  287 LANEDPDAA-GGLAVLGGSFLSAVGVLGGTLARISPTFVFDELLVTHYFGSARELAAALARGLVQQGVAQGYKXXXXXXXXXXXXXXXXXXXPGSERSYKVVGSMELLGDPLALVNKLSDSVLQFLRTTQAEFRGEEPTFGAGARMLVSGVVGGAFGSAAKIAGSLEDVIRGL--SGTEVADAEGGGDTRVRHLKHGFQRGGQXXXXXXXXVLYDSIQQGISGLVDRPMEGAKEEGVAGFLTGMAKGIV 532          
BLAST of mRNA_S-dermatodea_contig11479.961.1 vs. uniprot
Match: A0A7S2GN42_9STRA (Hypothetical protein (Fragment) n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GN42_9STRA)

HSP 1 Score: 180 bits (456), Expect = 4.820e-50
Identity = 102/240 (42.50%), Postives = 150/240 (62.50%), Query Frame = 0
Query:    1 MVYLEAFRHSTIVVRLELLVGQGALAPDAMALDDPEATTGGLTVLGGGFLTVLSVLGSSIAHVNPTFVFDELVVTHYCGSVRGLSGLVLTALTHQAVAQGYKVVGSMELLGDPLSLVSKLGDSVVQFFHKTKAEMTGDADTMGAGAKVLVKGLVGGTFGSAAKITGVCVELHANWFPSGQHSFTIPSQRDSPTPHLARLRQVFYESMKAGLSGLIDLPTEGAKEEGLAGFIAGMAKGIVG 240
            ++Y+E   HS+IVV+LE++VG   L  D +A D+      G+ ++G    ++L VLGSS+AH+NPTF F+EL +    G    L+  +  +L  Q VAQGYKVVGSMELLGDP+SLVS +G  V QFF KT A+M G+++T G G K L +G+VGGTFGS AKITG    L +    +GQ+      + +     +    +  +  +  G++G++  P EGA++ G+ GF+ G+ KG+VG
Sbjct:  215 LIYIETLYHSSIVVQLEVMVGSRNLNTDDLADDEQR----GVWLMGSSLWSMLVVLGSSLAHINPTFQFNELKLADSFGQRWDLASSIFMSLVKQGVAQGYKVVGSMELLGDPVSLVSNMGVGVYQFFRKTGADMLGESETRGEGVKHLFQGVVGGTFGSVAKITGAADTLLSA--VTGQNERDNWQRPEHVGQGIVIGSERVWRGVTEGITGIVVRPIEGAQQNGVPGFLFGLGKGVVG 448          
BLAST of mRNA_S-dermatodea_contig11479.961.1 vs. uniprot
Match: W7U3K2_9STRA (Ph domain containing protein n=4 Tax=Monodopsidaceae TaxID=425072 RepID=W7U3K2_9STRA)

HSP 1 Score: 128 bits (322), Expect = 3.370e-30
Identity = 73/190 (38.42%), Postives = 112/190 (58.95%), Query Frame = 0
Query:    1 MVYLEAFRHSTIVVRLELLVGQGALAP----------------DAMALDDP--EATTGGLTVLGGGFLTVLSVLGSSIAHVNP-TFVFDELVVTHYCGSVRGLSGLVLTALTHQAVAQGYKVVGSMELLGDPLSLVSKLGDSVVQFFHKTKAEMTGDADTMGAGAKVLVKGLVGGTFGSAAKITGVCVEL 171
            +VY+E F HS+++V +EL+ G G                     ++ LD    EA   GL ++G G + +L+ +  S+A ++  T VF+EL+ THY GS   L  +V+ +L  QA+ Q YK++G+M+LLG+PL+L    G  VV+FF +T+AE+ GDAD+ G G + L K ++GG F S +KITG    L
Sbjct: 3904 LVYIELFHHSSLIVGMELVPGGGNFPSRKERAKQTGLPGNRMDGSLGLDQELDEALVSGLELIGTGVVQLLADMARSLAQLSGLTLVFNELLFTHYFGSHYDLGHIVVLSLRQQAITQSYKLLGAMDLLGNPLNLFLGFGSGVVEFFRRTQAELVGDADSKGEGLRRLAKAVIGGPFSSVSKITGTVASL 4093          
BLAST of mRNA_S-dermatodea_contig11479.961.1 vs. uniprot
Match: D8LB75_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB75_ECTSI)

HSP 1 Score: 118 bits (295), Expect = 1.320e-26
Identity = 76/208 (36.54%), Postives = 110/208 (52.88%), Query Frame = 0
Query:   42 LTVLGGGFLTVLSVLGSSIAHVNPTFVFDELVVTHYCGSVRGLSGLVLTALTHQAVAQGYKVVGSMELLGDPLSLVSKLGDSVVQFFHKTKAEMTGDADTMGAGAKVLVKGLVGGTFGSAAKITGV---------CVELHANWFPSGQHSFTIPSQRDSPTPHLARLRQVFYESMKAGLSGLIDLPTEGAKEEGLAGFIAGMAKGIVG 240
            L  +GG    +LS  G+ IA+ +PTF FD   + HY GS      LV+ +   Q V Q YKV+G +++LGDPLSL   +   V+ F  KT       A  +G G+K LVKG+VGGT  SA+K+T           C++  A   PSG  S   P         L +    F  ++K G++G++  P  GA++ G AGF+ G+ +G+VG
Sbjct: 2612 LGAVGGVVWGLLSSFGAGIANASPTFNFDAYELEHYYGSKTQAVTLVVMSFVKQGVVQAYKVLGHIDILGDPLSLGMNISSGVIGFVTKT------GAGHIGEGSKDLVKGVVGGTASSASKMTDALDNFVREAGCMDAEA---PSGMESTKAPEHLGQG---LTQGMMYFGHTVKDGITGVVMKPVRGARKNGAAGFVKGVGQGVVG 2807          
BLAST of mRNA_S-dermatodea_contig11479.961.1 vs. uniprot
Match: G5AC94_PHYSP (Uncharacterized protein n=11 Tax=Phytophthora TaxID=4783 RepID=G5AC94_PHYSP)

HSP 1 Score: 115 bits (289), Expect = 8.260e-26
Identity = 78/240 (32.50%), Postives = 124/240 (51.67%), Query Frame = 0
Query:    1 MVYLEAFRHSTIVVRLELLVGQGALAPDAMALDDPEATTGGLTVLGGGFLTVLSVLGSSIAHVNPTFVFDELVVTHYCGSVRGLSGLVLTALTHQAVAQGYKVVGSMELLGDPLSLVSKLGDSVVQFFHKTKAEMTGDADTMGAGAKVLVKGLVGGTFGSAAKITGVCVELHANWFPSGQHSFTIPSQRDSPTPHLARLRQVFYESMKAGLSGLIDLPTEGAKEEGLAGFIAGMAKGIVG 240
            +VY +  R S++ V LE  + +          D   +T GG +V+ G    V+ ++GS+++  +PTF F E+V+     + + L   ++     Q V Q Y++VGS +++G+P+ LV  LG  VV+F   TK E+TGDA T G G KVL K +V     S AKITG   +    +  +   S +     DS +   A L+  F + +  G +G+   P EGA + G+ G + G  +GI G
Sbjct: 2256 LVYFDILRISSLSVDLEYSITRK---------DIVSSTGGGHSVIFGFLSQVVGLIGSNLSG-SPTFSFSEIVIVRCFSTKQRLQSQLVANYVQQGVMQAYRLVGSADIIGNPIGLVEDLGSGVVEFLKITKGELTGDAQTRGEGVKVLGKTIVKSGASSVAKITGSLDKFVGEF--ADDSSASASGGNDSSSNDNAGLK--FAKDLGRGFTGIFTKPVEGAMKGGVTGLVQGTVQGIAG 2481          
BLAST of mRNA_S-dermatodea_contig11479.961.1 vs. uniprot
Match: A0A662X4E4_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X4E4_9STRA)

HSP 1 Score: 113 bits (283), Expect = 5.200e-25
Identity = 76/240 (31.67%), Postives = 121/240 (50.42%), Query Frame = 0
Query:    1 MVYLEAFRHSTIVVRLELLVGQGALAPDAMALDDPEATTGGLTVLGGGFLTVLSVLGSSIAHVNPTFVFDELVVTHYCGSVRGLSGLVLTALTHQAVAQGYKVVGSMELLGDPLSLVSKLGDSVVQFFHKTKAEMTGDADTMGAGAKVLVKGLVGGTFGSAAKITGVCVELHANWFPSGQHSFTIPSQRDSPTPHLARLRQVFYESMKAGLSGLIDLPTEGAKEEGLAGFIAGMAKGIVG 240
            +VY +  R S++ V LE  + +          D   +T GG +V+ G    ++ ++GS+++  +PTF F E+V+     + + L   ++     Q V Q Y++VGS +++G+P+ LV  LG  VV+F   TK E+TGDA T G G KVL K +V     S AKITG   +    +     +S          T + A L+  F + +  G +G+   P EGA   G+ G + G  +GI G
Sbjct: 2280 LVYFDILRISSLSVDLEYSITRK---------DIVSSTGGGHSVIFGFISQIIGLIGSNLSG-SPTFNFSEIVIVRCFSTKQRLQSQLIANYVQQGVMQAYRLVGSADIIGNPIGLVEDLGSGVVEFLKITKGELTGDAQTRGEGVKVLGKTIVKSGASSVAKITGSLDKFVGEFADDSANSXXXXXXXXXXTDN-AGLK--FAKDLGRGFTGIFTKPVEGAMRGGVTGLVQGTVQGIAG 2506          
BLAST of mRNA_S-dermatodea_contig11479.961.1 vs. uniprot
Match: A0A484EGV5_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EGV5_BRELC)

HSP 1 Score: 113 bits (282), Expect = 7.060e-25
Identity = 73/240 (30.42%), Postives = 124/240 (51.67%), Query Frame = 0
Query:    1 MVYLEAFRHSTIVVRLELLVGQGALAPDAMALDDPEATTGGLTVLGGGFLTVLSVLGSSIAHVNPTFVFDELVVTHYCGSVRGLSGLVLTALTHQAVAQGYKVVGSMELLGDPLSLVSKLGDSVVQFFHKTKAEMTGDADTMGAGAKVLVKGLVGGTFGSAAKITGVCVELHANWFPSGQHSFTIPSQRDSPTPHLARLRQVFYESMKAGLSGLIDLPTEGAKEEGLAGFIAGMAKGIVG 240
            +VY +  R S++ V LE  + +          D   +T GG +++ GG   ++ ++GS+++  +PTF F E+V+     + + L   ++     Q V Q Y+++GS +++G+P+ LV  LG  VV+F   TK E+TGDA T G G KVL K +V  +  S AKITG   +    +    + +        S +   A ++  F + +  G +G+   P EGA + G+ G + G  +GI G
Sbjct: 2257 LVYFDLLRISSLSVDLEYSITRK---------DIVSSTGGGHSIVFGGLSQIIGLIGSNLSG-SPTFSFSEIVIVRCFTTKQRLQSQLVANYVQQGVLQAYRLIGSADIIGNPIGLVEDLGSGVVEFLKITKGEITGDAQTRGEGVKVLGKTIVKSSASSVAKITGSLDKFVGEFADENRQN----DDDGSMSTDNAGIK--FAKDLGRGFTGIFTKPVEGAMKGGVTGLVQGTVQGITG 2480          
BLAST of mRNA_S-dermatodea_contig11479.961.1 vs. uniprot
Match: W2QD77_PHYPN (Uncharacterized protein n=15 Tax=Phytophthora TaxID=4783 RepID=W2QD77_PHYPN)

HSP 1 Score: 113 bits (282), Expect = 7.060e-25
Identity = 76/245 (31.02%), Postives = 119/245 (48.57%), Query Frame = 0
Query:    1 MVYLEAFRHSTIVVRLELLVGQGALAPDAMALDDPEATTGGLTVLGGGFLTVLSVLGSSIAHVNPTFVFDELVVTHYCGSVRGLSGLVLTALTHQAVAQGYKVVGSMELLGDPLSLVSKLGDSVVQFFHKTKAEMTGDADTMGAGAKVLVKGLVGGTFGSAAKITGVCVELHANWFPSGQHSFTIPSQRDSPTPHLARLRQ-----VFYESMKAGLSGLIDLPTEGAKEEGLAGFIAGMAKGIVG 240
            +VY +  R S++ + LE  + +          D   +T GG +V+ G    ++ ++GS+++  +PTF F E+V+     + + L   ++     Q V Q Y++VGS +++G+P+ LV  LG  VV+F   TK E+TGDA T G G KVL K +V     S AKITG                F      D P P +  L        F + +  G +G+   P EGA + G+ G + G  +GI G
Sbjct: 2257 LVYFDILRISSLSIDLEYSITRK---------DIVSSTGGGHSVIFGFLSQIIGLIGSNLSG-SPTFSFSEIVIVRCFSTKQRLQSQLVANYVQQGVMQAYRLVGSADIIGNPIGLVEDLGSGVVEFLKITKGELTGDAQTRGEGVKVLGKTIVKSGASSVAKITG------------SLDKFVGEFSDDKPDPSVEDLSNDNAGIKFAKDLGRGFTGIFTKPVEGAMKGGVTGLVQGTVQGIAG 2479          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11479.961.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2C7_ECTSI1.590e-10273.68Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KWU7_9PHAE3.410e-9665.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YJU6_9STRA3.700e-5446.99Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2GN42_9STRA4.820e-5042.50Hypothetical protein (Fragment) n=2 Tax=Dictyocha ... [more]
W7U3K2_9STRA3.370e-3038.42Ph domain containing protein n=4 Tax=Monodopsidace... [more]
D8LB75_ECTSI1.320e-2636.54Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
G5AC94_PHYSP8.260e-2632.50Uncharacterized protein n=11 Tax=Phytophthora TaxI... [more]
A0A662X4E4_9STRA5.200e-2531.67Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
A0A484EGV5_BRELC7.060e-2530.42Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
W2QD77_PHYPN7.060e-2531.02Uncharacterized protein n=15 Tax=Phytophthora TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR031645Vacuolar protein sorting-associated protein 13, C-terminalPFAMPF16909VPS13_Ccoord: 49..168
e-value: 2.9E-15
score: 56.5
NoneNo IPR availablePANTHERPTHR16166:SF93VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 13Dcoord: 43..240
IPR026847Vacuolar protein sorting-associated protein 13PANTHERPTHR16166VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13coord: 43..240

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig11479contigS-dermatodea_contig11479:3802..6821 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig11479.961.1mRNA_S-dermatodea_contig11479.961.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig11479 3802..6852 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig11479.961.1 ID=prot_S-dermatodea_contig11479.961.1|Name=mRNA_S-dermatodea_contig11479.961.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=240bp
MVYLEAFRHSTIVVRLELLVGQGALAPDAMALDDPEATTGGLTVLGGGFL
TVLSVLGSSIAHVNPTFVFDELVVTHYCGSVRGLSGLVLTALTHQAVAQG
YKVVGSMELLGDPLSLVSKLGDSVVQFFHKTKAEMTGDADTMGAGAKVLV
KGLVGGTFGSAAKITGVCVELHANWFPSGQHSFTIPSQRDSPTPHLARLR
QVFYESMKAGLSGLIDLPTEGAKEEGLAGFIAGMAKGIVG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR031645VPS13_C
IPR026847VPS13